Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036472 Camellia sinensis var. sinensis HOM05D006106 ORTHO05D007662 7.7e-233 811.2 886 100.0
CSS0045921 Camellia sinensis var. sinensis HOM05D006106 ORTHO05D007662 9.9e-196 688.0 831 99.2
Dinv12500 Davidia involucrata HOM05D006106 ORTHO05D007662 8.8e-128 462.2 851 78.8
Nn7g36310 Nelumbo nucifera HOM05D006106 ORTHO05D007662 3.6e-121 440.3 842 81.9
Actinidia39218 Actinidia chinensis HOM05D006106 ORTHO05D007662 5.2e-120 436.4 858 78.0
GSVIVG01033271001 Vitis vinifera HOM05D006106 ORTHO05D007662 2.6e-119 434.1 853 81.8
Haze_19847 Corylus avellana HOM05D006106 ORTHO05D007662 8.3e-118 429.1 841 76.1
QL07p000909 Quercus lobata HOM05D006106 ORTHO05D007662 1.4e-117 428.3 799 81.0
Sc13g0001690 Simmondsia chinensis HOM05D006106 ORTHO05D007662 5.5e-114 416.4 852 76.3
Ciclev10004305m.g Citrus clementina HOM05D006106 ORTHO05D007662 2.8e-113 414.1 805 85.0
Potri.006G049900 Populus trichocarpa HOM05D006106 ORTHO05D007662 6.1e-113 412.9 811 75.8
Cfa016809 Carpinus fangiana HOM05D001739 ORTHO05D006605 8.0e-113 412.5 798 86.3
Rhsim03G0026900 Rhododendron simsii HOM05D006106 ORTHO05D007662 1.0e-112 412.1 918 57.0
Hma1.2p1_1041F.1_g251060 Hydrangea macrophylla HOM05D006106 ORTHO05D007662 2.3e-112 411.0 793 76.5
Duzib128G0400 Durio zibethinus HOM05D006106 ORTHO05D007662 3.0e-112 410.6 823 83.7
Sabra06G0034800 Salix brachista HOM05D006106 ORTHO05D007662 3.4e-111 407.1 801 82.4
TWI74G1340 Tripterygium wilfordii HOM05D006106 ORTHO05D007662 4.9e-110 403.3 788 82.9
Atru.chr1.1113 Acer truncatum HOM05D006106 ORTHO05D007662 5.4e-109 399.8 835 82.2
Prupe.7G058400 Prunus persica HOM05D006106 ORTHO05D007662 3.5e-108 397.1 819 82.9
Manes.08G051400 Manihot esculenta HOM05D006106 ORTHO05D007662 7.8e-108 396.0 795 84.7
AUR62024458 Chenopodium quinoa HOM05D006106 ORTHO05D007662 1.3e-107 395.2 862 74.9
Lju124C42G9 Lonicera japonica HOM05D006106 ORTHO05D007662 2.9e-107 394.0 849 70.2
Lj1g0017753 Lotus japonicus HOM05D006106 ORTHO05D007662 3.3e-106 390.6 815 82.8
Sopen04g007960 Solanum pennellii HOM05D006106 ORTHO05D007662 5.6e-106 389.8 841 72.3
AUR62026047 Chenopodium quinoa HOM05D006106 ORTHO05D007662 2.8e-105 387.5 872 70.4
FAN05G2558 Fragaria x ananassa HOM05D006106 ORTHO05D007662 1.5e-103 381.7 805 82.7
Hund24702 Selenicereus undatus HOM05D006106 ORTHO05D007662 3.7e-102 377.1 806 70.3
Nitab4.5_0000586g0120 Nicotiana tabacum HOM05D006106 ORTHO05D007662 8.3e-102 375.9 814 67.2
PSO384G4415 Papaver somniferum HOM05D006106 ORTHO05D007662 2.4e-101 374.4 860 79.0
Lsat_1_v5_gn_9_30580 Lactuca sativa HOM05D006106 ORTHO05D007662 4.1e-101 373.6 821 81.9
FvH4_6g24060 Fragaria vesca HOM05D006106 ORTHO05D007662 5.4e-101 373.2 803 82.4
Glyma.03G136200 Glycine max HOM05D006106 ORTHO05D007662 9.2e-101 372.5 808 83.4
EL10Ac3g07098 Beta vulgaris HOM05D006106 ORTHO05D007662 2.7e-100 370.9 898 66.9
Gorai.009G450600 Gossypium raimondii HOM05D006106 ORTHO05D007662 2.7e-100 370.9 837 80.2
Migut.J01752 Erythranthe guttata HOM05D006106 ORTHO05D007662 3.5e-100 370.5 831 80.0
Gorai.009G383700 Gossypium raimondii HOM05D006106 ORTHO05D007662 6.0e-100 369.8 837 80.3
Aqoxy1G00233 Aquilegia oxysepala HOM05D006106 ORTHO05D007662 5.0e-99 366.7 803 82.4
ClCG10G015760 Citrullus lanatus HOM05D006106 ORTHO05D007662 1.1e-98 365.5 822 81.4
MD12G1080100 Malus domestica HOM05D006106 ORTHO05D007662 1.1e-98 365.5 822 81.3
SGA_v2.0_scaffold105G30404 Striga asiatica HOM05D001739 ORTHO05D006605 1.5e-98 365.2 813 67.7
Cpa.g.sc224.2 Carica papaya HOM05D006106 ORTHO05D007662 1.9e-98 364.8 801 82.6
CsaV3_3G040680 Cucumis sativus L. HOM05D006106 ORTHO05D007662 1.2e-97 362.1 824 80.7
DCAR_009064 Daucus carota HOM05D006106 ORTHO05D007662 1.2e-97 362.1 825 66.5
MELO3C009803.2 Cucumis melo HOM05D006106 ORTHO05D007662 2.1e-97 361.3 784 83.5
Medtr7g091410 Medicago truncatula HOM05D006106 ORTHO05D007662 5.8e-95 353.2 800 82.9
HanXRQChr10g0296661 Helianthus annuus HOM05D006106 ORTHO05D007662 9.8e-95 352.4 776 83.9
Phvul.001G131500 Phaseolus vulgaris HOM05D006106 ORTHO05D007662 1.3e-94 352.1 819 81.1
Cc06_g17630 Coffea canephora HOM05D006106 ORTHO05D007662 6.4e-94 349.7 844 65.4
Eucgr.A02342 Eucalyptus grandis HOM05D006106 ORTHO05D007662 1.4e-93 348.6 750 63.5
ECA247G0166 Erigeron canadensis HOM05D001739 ORTHO05D006605 6.0e-92 343.2 755 85.7
TPR.G3692 Trifolium pratense HOM05D006106 ORTHO05D007662 1.7e-91 341.7 800 74.8
Psat3g074120 Pisum sativum HOM05D006106 ORTHO05D007662 1.9e-90 338.2 796 74.9
RcHm_v2.0_Chr3g0482651 Rosa chinensis HOM05D006106 ORTHO05D007662 6.2e-89 333.2 823 79.1
Ah.04g151600 Amaranthus hybridus HOM05D006106 ORTHO05D007662 9.9e-87 325.9 859 68.6
Gohir.A04G032500 Gossypium hirsutum HOM05D006106 ORTHO05D007662 2.2e-86 324.7 805 70.2
arahy.Tifrunner.gnm1.ann1.4I0CBR Arachis hypogaea HOM05D006106 ORTHO05D007662 1.1e-85 322.4 798 73.4
PSO339G0809 Papaver somniferum HOM05D006106 ORTHO05D007662 3.5e-84 317.4 797 78.8
Peaxi162Scf00130g00324 Petunia axillaris HOM05D006106 ORTHO05D007662 1.6e-81 308.5 845 70.2
HPP92_011279 Vanilla planifolia HOM05D006106 ORTHO05D007662 2.1e-81 308.1 785 78.2
PGR004G1513 Punica granatum HOM05D006106 ORTHO05D007662 8.1e-81 306.2 793 79.9
AT2G41720 Arabidopsis thaliana HOM05D006106 ORTHO05D007662 1.1e-80 305.8 780 79.9
arahy.Tifrunner.gnm1.ann1.HSF0DX Arachis hypogaea HOM05D006106 ORTHO05D007662 1.8e-80 305.1 798 80.2
Thhalv10016262m.g Eutrema salsugineum HOM05D006106 ORTHO05D007662 4.0e-80 303.9 780 80.0
Ca_15068_v3 Cicer arietinum L. HOM05D006106 ORTHO05D007662 2.0e-79 301.6 744 83.3
CARHR136820 Cardamine hirsuta HOM05D006106 ORTHO05D007662 4.4e-79 300.4 786 77.5
Aa31LG1G23740 Aethionema arabicum HOM05D006106 ORTHO05D007662 5.8e-79 300.1 779 64.3
AL4G40030 Arabidopsis lyrata HOM05D006106 ORTHO05D007662 1.3e-78 298.9 781 71.8
A05p02440 Brassica napus HOM05D006106 ORTHO05D007662 2.1e-76 291.6 788 64.2
C04p02890 Brassica napus HOM05D006106 ORTHO05D007662 8.7e-75 286.2 789 63.6
BolC4t21929H Brassica oleracea HOM05D006106 ORTHO05D007662 8.7e-75 286.2 789 63.6
BraA05t19238Z Brassica rapa HOM05D006106 ORTHO05D007662 1.1e-74 285.8 783 70.1
Sp4g23970 Schrenkiella parvula HOM05D006106 ORTHO05D007662 1.9e-74 285.0 784 78.6
TAR623G1683 Trochodendron aralioides HOM05D006106 ORTHO05D007662 2.4e-72 278.1 355 77.7
Gohir.D05G383800 Gossypium hirsutum HOM05D006106 ORTHO05D007662 4.0e-72 277.3 352 78.7
Hma1.2p1_1041F.1_g251050 Hydrangea macrophylla HOM05D006106 ORTHO05D007662 9.0e-72 276.2 168 73.8
CAN.G676.31 Capsicum annuum HOM05D006106 ORTHO05D007662 9.9e-71 272.7 322 82.6
VMungo1383G2820 Vigna mungo HOM05D006106 ORTHO05D007662 2.2e-70 271.6 798 60.5
vmacro07842 Vaccinium macrocarpon HOM05D006106 ORTHO05D007662 8.4e-70 269.6 905 52.9
Thecc.05G152200 Theobroma cacao HOM05D006106 ORTHO05D007662 2.4e-69 268.1 696 89.1
Oeu008911.1 Olea europaea HOM05D006106 ORTHO05D007662 3.2e-69 267.7 168 72.0
CDE08G0810 Ceratophyllum demersum HOM05D006106 ORTHO05D007662 3.5e-68 264.2 333 77.2
ATR0188G017 Amborella trichopoda HOM05D006106 ORTHO05D007662 1.5e-66 258.8 779 73.4
Gohir.D05G352101 Gossypium hirsutum HOM05D006106 ORTHO05D007662 1.5e-66 258.8 180 66.7
Sed0021985 Sechium edule HOM05D006106 ORTHO05D007662 3.6e-65 254.2 376 73.4
Zm00001eb325040 Zea mays HOM05D006106 ORTHO05D007662 1.3e-62 245.7 781 76.3
FAN14G5662 Fragaria x ananassa HOM05D006106 ORTHO05D007662 2.2e-62 245.0 821 71.7
CiPaw.10G034000 Carya illinoinensis HOM05D006106 ORTHO05D007662 2.1e-60 238.4 170 68.2
Nitab4.5_0009615g0030 Nicotiana tabacum HOM05D006106 ORTHO05D007662 7.9e-60 236.5 331 78.2
Lalb_Chr01g0017341 Lupinus albus HOM05D006106 ORTHO05D007662 8.7e-59 233.0 182 61.0
HPP92_011301 Vanilla planifolia HOM05D006106 ORTHO05D007662 8.7e-59 233.0 332 75.3
Solyc04g015950.3 Solanum lycopersicum HOM05D006106 ORTHO05D007662 5.6e-58 230.3 171 62.6
Glyma.19G138101 Glycine max HOM05D006106 ORTHO05D007662 1.6e-57 228.8 197 59.9
QL07p000892 Quercus lobata HOM05D006106 ORTHO05D007662 1.1e-56 226.1 153 68.6
Gohir.D05G352075 Gossypium hirsutum HOM05D006106 ORTHO05D007662 4.0e-56 224.2 156 67.9
Nitab4.5_0009615g0040 Nicotiana tabacum HOM05D006106 ORTHO05D007662 6.9e-56 223.4 165 64.2
Gohir.D05G383766 Gossypium hirsutum HOM05D006106 ORTHO05D007662 9.0e-56 223.0 156 67.9
COL.COLO4_28304 Corchorus olitorius HOM05D006106 ORTHO05D007662 4.9e-54 217.2 160 64.4
Ca_08448_v3 Cicer arietinum L. HOM05D006106 ORTHO05D007662 3.2e-53 214.5 159 65.4
Carub.0004s2400 Capsella rubella HOM05D006106 ORTHO05D007662 7.1e-53 213.4 720 80.4
THA.LOC104804858 Tarenaya hassleriana HOM05D006106 ORTHO05D007662 4.3e-50 204.1 158 55.7
BcaNung06815 Brassica carinata HOM05D006106 ORTHO05D007662 2.0e-47 195.3 161 52.8
TAR623G1698 Trochodendron aralioides HOM05D006106 ORTHO05D007662 2.9e-46 191.4 135 66.7
MBI17_g23175_MAGBIO Magnolia biondii HOM05D006106 ORTHO05D007662 1.8e-43 182.2 610 35.9
Pp3c2_1940 Physcomitrium patens HOM05D006106 ORTHO05D007662 2.1e-36 158.7 122 61.5
Mapoly0043s0117 Marchantia polymorpha HOM05D006106 ORTHO05D007662 7.9e-36 156.8 131 56.5
BcaC02g12786 Brassica carinata HOM05D000138 ORTHO05D007692 6.7e-35 153.7 115 58.3
Os07g0213300 Oryza sativa ssp. japonica HOM05D006106 ORTHO05D007662 8.8e-35 153.3 142 44.4
AagrBONN_evm.TU.Sc2ySwM_344.4225 Anthoceros agrestis HOM05D006106 ORTHO05D007662 9.7e-34 149.8 118 57.6
Actinidia09323 Actinidia chinensis HOM05D001739 ORTHO05D006605 8.2e-33 146.7 120 58.3
CDE08G0364 Ceratophyllum demersum HOM05D006106 ORTHO05D007662 1.8e-32 145.6 118 58.5
Rhsim03G0026800 Rhododendron simsii HOM05D006106 ORTHO05D007662 1.8e-32 145.6 139 54.0
Rhsim03G0025700 Rhododendron simsii HOM05D006106 ORTHO05D007662 1.0e-30 139.8 169 46.2
CiPaw.10G033900 Carya illinoinensis HOM05D006106 ORTHO05D007662 2.1e-28 132.1 67 88.1
MBI17_g23173_MAGBIO Magnolia biondii HOM05D006106 ORTHO05D007662 2.1e-28 132.1 87 70.1
Gorai.003G091300 Gossypium raimondii HOM05D006106 ORTHO05D007662 6.1e-28 130.6 239 65.7
unitig_578.g15981 Utricularia gibba HOM05D006106 ORTHO05D007662 9.7e-26 123.2 119 46.2
Rhsim03G0026000 Rhododendron simsii HOM05D001739 ORTHO05D007662 3.1e-24 118.2 76 68.4
Rhsim03G0025500 Rhododendron simsii HOM05D006106 ORTHO05D007662 2.0e-23 115.5 76 67.1
CBR_g50368 Chara braunii HOM05D006106 ORTHO05D007662 7.7e-23 113.6 113 47.8
MELO3C031816.2 Cucumis melo HOM05D006106 ORTHO05D007662 8.0e-20 103.6 81 56.8
COL.COLO4_28306 Corchorus olitorius HOM05D006106 ORTHO05D007662 8.8e-19 100.1 131 46.6
BcaNung06942 Brassica carinata HOM05D006106 ORTHO05D007662 3.7e-17 94.7 114 38.6
MELO3C030027.2 Cucumis melo HOM05D006106 ORTHO05D007662 3.5e-15 88.2 66 60.6
Gohir.D03G068901 Gossypium hirsutum HOM05D006106 ORTHO05D007662 4.7e-12 77.8 46 76.1
Rhsim09G0172900 Rhododendron simsii HOM05D006106 ORTHO05D007662 7.7e-07 60.5 35 74.3


User provided reference genes

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