Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034299 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D005558 1.9e-187 659.1 345 100.0
Lsat_1_v5_gn_1_86700 Lactuca sativa HOM05D004135 ORTHO05D005558 1.7e-135 486.5 306 80.4
CiPaw.09G148400 Carya illinoinensis HOM05D004135 ORTHO05D005558 2.9e-135 485.7 301 81.1
Cfa000762 Carpinus fangiana HOM05D004135 ORTHO05D005558 1.4e-134 483.4 301 80.7
Manes.14G126900 Manihot esculenta HOM05D004135 ORTHO05D005558 9.3e-134 480.7 301 83.4
Hma1.2p1_0300F.1_g117980 Hydrangea macrophylla HOM05D004135 ORTHO05D005558 1.2e-133 480.3 303 80.5
Oeu060331.1 Olea europaea HOM05D004135 ORTHO05D005558 1.2e-133 480.3 301 81.1
CANSAT35G0477 Cannabis sativa HOM05D004135 ORTHO05D005558 1.6e-133 479.9 301 79.7
GSVIVG01021747001 Vitis vinifera HOM05D004135 ORTHO05D005558 1.6e-133 479.9 303 80.5
Nitab4.5_0012414g0010 Nicotiana tabacum HOM05D004135 ORTHO05D005558 2.7e-133 479.2 301 80.7
QL05p064858 Quercus lobata HOM05D004135 ORTHO05D005558 2.7e-133 479.2 300 80.7
Nitab4.5_0001219g0030 Nicotiana tabacum HOM05D004135 ORTHO05D005558 3.5e-133 478.8 301 80.7
Gohir.A05G111900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 4.6e-133 478.4 305 78.7
CAN.G675.30 Capsicum annuum HOM05D004135 ORTHO05D005558 1.3e-132 476.9 301 80.1
Lj1A1156T44 Lonicera japonica HOM05D004135 ORTHO05D005558 1.3e-132 476.9 315 78.7
MELO3C007042.2 Cucumis melo HOM05D004135 ORTHO05D005558 1.8e-132 476.5 335 73.4
ClCG01G025420 Citrullus lanatus HOM05D004135 ORTHO05D005558 3.9e-132 475.3 301 78.7
Sopen02g018720 Solanum pennellii HOM05D004135 ORTHO05D005558 3.9e-132 475.3 301 80.1
TAR629G2923 Trochodendron aralioides HOM05D004135 ORTHO05D005558 3.9e-132 475.3 301 80.1
Solyc02g069585.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 5.1e-132 474.9 301 79.7
Lj2A337T32 Lonicera japonica HOM05D004135 ORTHO05D005558 8.7e-132 474.2 303 79.5
Peaxi162Scf00195g00518 Petunia axillaris HOM05D004135 ORTHO05D005558 8.7e-132 474.2 301 79.1
SalBow8G1631 Salvia bowleyana HOM05D004135 ORTHO05D005558 1.1e-131 473.8 301 79.1
SalBow8G2729 Salvia bowleyana HOM05D004135 ORTHO05D005558 1.1e-131 473.8 301 79.1
CsaV3_6G052670 Cucumis sativus L. HOM05D004135 ORTHO05D005558 1.5e-131 473.4 301 78.7
Gohir.D05G112400 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.5e-131 473.4 305 81.0
Cpa.g.sc285.5 Carica papaya HOM05D004135 ORTHO05D005558 1.9e-131 473.0 301 79.1
Duzib235G1539 Durio zibethinus HOM05D004135 ORTHO05D005558 1.9e-131 473.0 301 81.4
TAR627G0684 Trochodendron aralioides HOM05D004135 ORTHO05D005558 1.9e-131 473.0 301 79.7
MSTRG.16319 Avicennia marina HOM05D004135 ORTHO05D005558 2.5e-131 472.6 311 76.8
PGSC0003DMG400021137 Solanum tuberosum HOM05D004135 ORTHO05D005558 3.3e-131 472.2 301 79.4
THA.LOC104798582 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 4.3e-131 471.9 301 78.1
HanXRQChr11g0340901 Helianthus annuus HOM05D004135 ORTHO05D005558 1.3e-130 470.3 301 78.4
Potri.011G155800 Populus trichocarpa HOM05D004135 ORTHO05D005558 1.6e-130 469.9 301 79.1
Thecc.06G007700 Theobroma cacao HOM05D004135 ORTHO05D005558 2.1e-130 469.5 301 81.1
Manes.06G053900 Manihot esculenta HOM05D004135 ORTHO05D005558 2.8e-130 469.2 301 79.1
DCAR_003828 Daucus carota HOM05D004135 ORTHO05D005558 3.7e-130 468.8 308 76.3
Gorai.009G116600 Gossypium raimondii HOM05D004135 ORTHO05D005558 6.3e-130 468.0 305 80.3
Duzib160G0522 Durio zibethinus HOM05D004135 ORTHO05D005558 8.2e-130 467.6 301 80.4
Migut.M01941 Erythranthe guttata HOM05D004135 ORTHO05D005558 8.2e-130 467.6 303 78.5
Sed0027064 Sechium edule HOM05D004135 ORTHO05D005558 1.4e-129 466.8 301 77.7
Sopen02g009560 Solanum pennellii HOM05D004135 ORTHO05D005558 1.4e-129 466.8 301 79.1
THA.LOC104814339 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 4.1e-129 465.3 301 76.7
Sc24g0002580 Simmondsia chinensis HOM05D004135 ORTHO05D005558 5.3e-129 464.9 303 78.5
SGA_v2.0_scaffold298G47640 Striga asiatica HOM05D004135 ORTHO05D005558 5.3e-129 464.9 322 75.2
MSTRG.7569 Avicennia marina HOM05D004135 ORTHO05D005558 6.9e-129 464.5 301 77.4
Ciclev10016127m.g Citrus clementina HOM05D004135 ORTHO05D005558 6.9e-129 464.5 301 77.4
PGSC0003DMG400031401 Solanum tuberosum HOM05D004135 ORTHO05D005558 6.9e-129 464.5 301 78.7
Solyc02g030243.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 9.0e-129 464.2 301 78.7
Gorai.005G119100 Gossypium raimondii HOM05D004135 ORTHO05D005558 1.2e-128 463.8 310 74.2
HanXRQChr04g0119201 Helianthus annuus HOM05D004135 ORTHO05D005558 1.2e-128 463.8 308 76.6
PSO541G2415 Papaver somniferum HOM05D004135 ORTHO05D005558 1.5e-128 463.4 301 78.7
Eucgr.D01026 Eucalyptus grandis HOM05D004135 ORTHO05D005558 3.4e-128 462.2 302 77.2
Gohir.D02G104900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 3.4e-128 462.2 310 73.9
PSO675G0864 Papaver somniferum HOM05D004135 ORTHO05D005558 5.9e-128 461.5 301 79.1
Prupe.4G101800 Prunus persica HOM05D004135 ORTHO05D005558 1.0e-127 460.7 301 76.4
Gohir.A02G088700 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.3e-127 460.3 301 76.1
DCAR_007807 Daucus carota HOM05D004135 ORTHO05D005558 1.7e-127 459.9 306 77.5
Aa31LG6G11870 Aethionema arabicum HOM05D004135 ORTHO05D005558 3.8e-127 458.8 301 76.1
AT1G30630 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 6.5e-127 458.0 301 75.1
EL10Ac8g19524 Beta vulgaris HOM05D004135 ORTHO05D005558 6.5e-127 458.0 303 74.9
CDE02G1412 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 1.9e-126 456.4 305 76.7
AL1G44690 Arabidopsis lyrata HOM05D004135 ORTHO05D005558 2.5e-126 456.1 301 75.1
AUR62027344 Chenopodium quinoa HOM05D004135 ORTHO05D005558 2.5e-126 456.1 303 74.9
Sed0006315 Sechium edule HOM05D004135 ORTHO05D005558 2.5e-126 456.1 302 76.5
Carub.0001s2889 Capsella rubella HOM05D004135 ORTHO05D005558 3.2e-126 455.7 301 74.8
Nn7g38349 Nelumbo nucifera HOM05D004135 ORTHO05D005558 3.2e-126 455.7 332 72.6
Aa31LG10G6460 Aethionema arabicum HOM05D004135 ORTHO05D005558 7.2e-126 454.5 301 75.1
Thhalv10008349m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 1.2e-125 453.8 309 72.5
Lsat_1_v5_gn_7_31180 Lactuca sativa HOM05D004135 ORTHO05D005558 1.2e-125 453.8 308 76.0
A03p19330 Brassica napus HOM05D004135 ORTHO05D005558 3.6e-125 452.2 309 72.8
Sp1g26530 Schrenkiella parvula HOM05D004135 ORTHO05D005558 4.6e-125 451.8 301 74.1
BcaC01g05751 Brassica carinata HOM05D004135 ORTHO05D005558 6.1e-125 451.4 301 74.4
C03p22580 Brassica napus HOM05D004135 ORTHO05D005558 6.1e-125 451.4 301 74.4
Aqoxy6G00202 Aquilegia oxysepala HOM05D004135 ORTHO05D005558 7.9e-125 451.1 301 76.4
BcaB06g28829 Brassica carinata HOM05D004135 ORTHO05D005558 7.9e-125 451.1 301 74.1
BolC3t14655H Brassica oleracea HOM05D004135 ORTHO05D005558 1.3e-124 450.3 301 74.8
BraA03t11189Z Brassica rapa HOM05D004135 ORTHO05D005558 1.3e-124 450.3 301 74.1
CARHR030110 Cardamine hirsuta HOM05D004135 ORTHO05D005558 3.0e-124 449.1 309 72.5
ATR0763G246 Amborella trichopoda HOM05D004135 ORTHO05D005558 5.1e-124 448.4 301 75.1
AUR62042515 Chenopodium quinoa HOM05D004135 ORTHO05D005558 5.1e-124 448.4 303 73.3
Thhalv10017028m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 6.7e-124 448.0 301 75.4
AT2G34840 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 8.7e-124 447.6 301 74.4
BcaB07g32703 Brassica carinata HOM05D004135 ORTHO05D005558 1.1e-123 447.2 309 71.2
Sp4g17120 Schrenkiella parvula HOM05D004135 ORTHO05D005558 1.1e-123 447.2 301 74.1
BraA04t18166Z Brassica rapa HOM05D004135 ORTHO05D005558 1.5e-123 446.8 309 72.2
Sabra11G0144000 Salix brachista HOM05D004135 ORTHO05D005558 1.9e-123 446.4 316 75.9
C04p64030 Brassica napus HOM05D004135 ORTHO05D005558 4.3e-123 445.3 301 73.4
A04p26610 Brassica napus HOM05D004135 ORTHO05D005558 5.7e-123 444.9 301 73.4
unitig_748.g7354 Utricularia gibba HOM05D004135 ORTHO05D005558 5.7e-123 444.9 301 73.8
BcaC05g27087 Brassica carinata HOM05D004135 ORTHO05D005558 7.4e-123 444.5 309 70.9
C05p29690 Brassica napus HOM05D004135 ORTHO05D005558 7.4e-123 444.5 309 70.9
BolC5t31698H Brassica oleracea HOM05D004135 ORTHO05D005558 7.4e-123 444.5 309 70.9
A09p35780 Brassica napus HOM05D004135 ORTHO05D005558 1.6e-122 443.4 309 70.6
BraA09t39101Z Brassica rapa HOM05D004135 ORTHO05D005558 1.6e-122 443.4 309 70.6
PGR083G2348 Punica granatum HOM05D004135 ORTHO05D005558 1.6e-122 443.4 310 73.2
Carub.0004s1652 Capsella rubella HOM05D004135 ORTHO05D005558 2.2e-122 443.0 301 73.8
Nn4g26687 Nelumbo nucifera HOM05D004135 ORTHO05D005558 2.8e-122 442.6 301 75.1
vmacro03457 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 2.8e-122 442.6 319 74.6
BcaC02g07752 Brassica carinata HOM05D004135 ORTHO05D005558 3.7e-122 442.2 301 73.1
BolC4t27879H Brassica oleracea HOM05D004135 ORTHO05D005558 4.8e-122 441.8 301 73.1
HPP92_013200 Vanilla planifolia HOM05D004135 ORTHO05D005558 4.8e-122 441.8 307 72.0
TWI38G0133 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 8.2e-122 441.0 304 77.6
TWI15G0841 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 3.1e-121 439.1 304 77.6
TWI81G0788 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 5.3e-121 438.3 302 74.8
Os04g0612600 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 1.5e-120 436.8 305 71.5
Glyma.15G136100 Glycine max HOM05D004135 ORTHO05D005558 2.6e-120 436.0 300 72.0
Zm00001eb430730 Zea mays HOM05D004135 ORTHO05D005558 2.6e-120 436.0 305 71.5
Ah.11g045310 Amaranthus hybridus HOM05D004135 ORTHO05D005558 3.4e-120 435.6 301 72.4
Ca_00931_v3 Cicer arietinum L. HOM05D004135 ORTHO05D005558 3.4e-120 435.6 301 73.1
vmacro10993 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 4.5e-120 435.3 461 56.2
Phvul.006G122500 Phaseolus vulgaris HOM05D004135 ORTHO05D005558 1.7e-119 433.3 300 72.0
arahy.Tifrunner.gnm1.ann1.CJHC7K Arachis hypogaea HOM05D004135 ORTHO05D005558 2.9e-119 432.6 305 71.8
Lj6g0020585 Lotus japonicus HOM05D004135 ORTHO05D005558 2.9e-119 432.6 301 71.8
MD05G1263700 Malus domestica HOM05D004135 ORTHO05D005558 3.8e-119 432.2 298 75.5
Medtr2g032130 Medicago truncatula HOM05D004135 ORTHO05D005558 1.1e-118 430.6 301 72.4
RcHm_v2.0_Chr5g0018341 Rosa chinensis HOM05D004135 ORTHO05D005558 1.1e-118 430.6 310 73.9
Glyma.09G030400 Glycine max HOM05D004135 ORTHO05D005558 4.2e-118 428.7 300 70.7
Actinidia31378 Actinidia chinensis HOM05D004135 ORTHO05D005558 2.1e-117 426.4 274 80.7
Actinidia32352 Actinidia chinensis HOM05D004135 ORTHO05D005558 2.7e-117 426.0 305 75.1
Oeu052702.4 Olea europaea HOM05D004135 ORTHO05D005558 4.6e-117 425.2 298 75.2
ECA236G2122 Erigeron canadensis HOM05D000091 ORTHO05D001510 6.1e-117 424.9 291 74.6
Lalb_Chr20g0120301 Lupinus albus HOM05D004135 ORTHO05D005558 8.8e-116 421.0 301 69.8
FvH4_3g11400 Fragaria vesca HOM05D004135 ORTHO05D005558 2.6e-115 419.5 309 70.6
Haze_08569 Corylus avellana HOM05D004135 ORTHO05D005558 2.8e-114 416.0 304 72.0
FAN16G1287 Fragaria x ananassa HOM05D004135 ORTHO05D005558 3.7e-114 415.6 340 65.3
VMungo0540G1545 Vigna mungo HOM05D004135 ORTHO05D005558 6.3e-114 414.8 300 69.7
FAN25G0882 Fragaria x ananassa HOM05D004135 ORTHO05D005558 8.2e-114 414.5 303 71.6
FAN21G1456 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.1e-113 414.1 311 69.8
MBI18_g26296_MAGBIO Magnolia biondii HOM05D004135 ORTHO05D005558 5.3e-113 411.8 326 67.5
MD10G1241400 Malus domestica HOM05D004135 ORTHO05D005558 6.9e-113 411.4 295 72.2
Atru.chr6.3256 Acer truncatum HOM05D004135 ORTHO05D005558 2.2e-111 406.4 303 69.3
Dinv04216 Davidia involucrata HOM05D004135 ORTHO05D005558 5.7e-107 391.7 245 81.6
TPR.G8030 Trifolium pratense HOM05D004135 ORTHO05D005558 2.0e-104 383.3 274 71.2
Psat1g164080 Pisum sativum HOM05D004135 ORTHO05D005558 1.0e-103 380.9 267 71.9
Rhsim02G0165800 Rhododendron simsii HOM05D004135 ORTHO05D005558 1.5e-102 377.1 311 68.8
Zm00001eb432010 Zea mays HOM05D004135 ORTHO05D005558 2.5e-102 376.3 311 62.4
Pp3c27_2170 Physcomitrium patens HOM05D004135 ORTHO05D005558 4.2e-102 375.6 303 61.7
Pp3c16_16890 Physcomitrium patens HOM05D004135 ORTHO05D005558 1.0e-100 370.9 303 61.1
Pp3c6_18240 Physcomitrium patens HOM05D004135 ORTHO05D005558 1.0e-100 370.9 303 60.7
Os04g0644700 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 1.8e-100 370.2 309 62.8
Cc09_g07090 Coffea canephora HOM05D004135 ORTHO05D005558 5.2e-100 368.6 243 77.4
Mapoly0002s0056 Marchantia polymorpha HOM05D004135 ORTHO05D005558 2.8e-98 362.8 297 60.6
Actinidia25200 Actinidia chinensis HOM05D004135 ORTHO05D005558 2.9e-95 352.8 203 86.7
arahy.Tifrunner.gnm1.ann1.NB4WMM Arachis hypogaea HOM05D004135 ORTHO05D005558 1.9e-94 350.1 243 72.4
AagrBONN_evm.TU.Sc2ySwM_117.3836 Anthoceros agrestis HOM05D004135 ORTHO05D005558 4.4e-91 339.0 301 61.5
COL.COLO4_26892 Corchorus olitorius HOM05D004135 ORTHO05D005558 1.9e-78 297.0 287 57.5
SMO358G0532 Selaginella moellendorffii HOM05D004135 ORTHO05D005558 8.0e-77 291.6 302 52.0
CBR_g34668 Chara braunii HOM05D004135 ORTHO05D005558 9.8e-75 284.6 303 50.5
Cre13.g592450 Chlamydomonas reinhardtii HOM05D004135 ORTHO05D005558 2.8e-69 266.5 304 47.0
PRCOL_00001868 Prasinoderma coloniale HOM05D004135 ORTHO05D005558 3.7e-66 256.1 299 44.8
MCO11G236 Micromonas commoda HOM05D004135 ORTHO05D005558 1.4e-65 254.2 296 45.6
CDE06G2577 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 8.9e-60 235.0 179 68.7
Zm00001eb274480 Zea mays HOM05D004135 ORTHO05D005558 2.2e-58 230.3 154 72.1
Haze_05958 Corylus avellana HOM05D006556 ORTHO05D008146 1.9e-57 227.3 151 77.5
Thecc.06G007200 Theobroma cacao HOM05D004135 ORTHO05D005558 1.9e-54 217.2 113 92.0
COL.COLO4_29004 Corchorus olitorius HOM05D004135 ORTHO05D005558 4.0e-44 183.0 138 68.8
Zm00001eb180170 Zea mays HOM05D004135 ORTHO05D444922 2.3e-23 114.0 75 76.0
CSS0024113 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D028393 5.6e-22 109.4 57 94.7
Zm00001eb135420 Zea mays HOM05D004135 ORTHO05D443401 4.8e-21 106.3 93 60.2
AUR62011277 Chenopodium quinoa HOM05D004135 ORTHO05D138132 6.2e-21 105.9 65 81.5
SGA_v2.0_scaffold147G36336 Striga asiatica HOM05D004135 ORTHO05D000001 6.2e-21 105.9 197 37.1
RcHm_v2.0_Chr6g0289631 Rosa chinensis HOM05D004135 ORTHO05D008146 1.8e-20 104.4 66 77.3
SGA_v2.0_scaffold147G36337 Striga asiatica HOM05D004135 ORTHO05D401852 2.0e-19 100.9 141 41.8
RcHm_v2.0_Chr6g0289621 Rosa chinensis HOM05D004135 ORTHO05D028393 2.9e-18 97.1 70 67.1
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 1.4e-17 94.7 80 63.8
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 1.2e-16 91.7 80 62.5
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 1.3e-15 88.2 80 61.2
RcHm_v2.0_Chr0c29g0501101 Rosa chinensis HOM05D004135 ORTHO05D028393 8.7e-15 85.5 58 67.2
RcHm_v2.0_Chr1g0337861 Rosa chinensis HOM05D004135 ORTHO05D028393 8.7e-15 85.5 58 67.2
Zm00001eb388920 Zea mays HOM05D000787 ORTHO05D001019 1.1e-14 85.1 97 51.5
AUR62044460 Chenopodium quinoa HOM05D004135 ORTHO05D137931 6.1e-08 62.8 38 81.6
VMungo0540G1336 Vigna mungo HOM05D000328 ORTHO05D000191 1.0e-07 62.0 41 65.9
Zm00001eb297670 Zea mays HOM05D004958 ORTHO05D005983 1.9e-06 57.8 48 62.5
Zm00001eb373640 Zea mays HOM05D004135 ORTHO05D444823 5.7e-06 56.2 63 54.0


User provided reference genes

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