Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034120 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D001832 1.7e-271 938.7 480 100.0
Dinv22150 Davidia involucrata HOM05D001312 ORTHO05D001832 3.8e-85 319.7 405 49.4
Actinidia06935 Actinidia chinensis HOM05D001312 ORTHO05D001832 1.2e-81 308.1 307 56.0
Rhsim13G0217000 Rhododendron simsii HOM05D001312 ORTHO05D001832 1.7e-77 294.3 489 43.6
Hma1.2p1_1920F.1_g307540 Hydrangea macrophylla HOM05D001312 ORTHO05D001832 4.9e-72 276.2 490 41.0
CiPaw.13G153400 Carya illinoinensis HOM05D001312 ORTHO05D001832 1.3e-48 198.4 281 45.2
CAN.G633.5 Capsicum annuum HOM05D001312 ORTHO05D001832 2.2e-48 197.6 346 40.5
CiPaw.14G115800 Carya illinoinensis HOM05D001312 ORTHO05D001832 2.9e-48 197.2 283 45.2
Potri.009G049100 Populus trichocarpa HOM05D001312 ORTHO05D001832 6.4e-48 196.1 423 39.2
Peaxi162Scf00004g03919 Petunia axillaris HOM05D001312 ORTHO05D001832 1.9e-47 194.5 342 41.2
GSVIVG01037231001 Vitis vinifera HOM05D001312 ORTHO05D001832 3.2e-47 193.7 438 35.2
Prupe.4G257200 Prunus persica HOM05D001312 ORTHO05D001832 9.2e-47 192.2 277 45.8
Cc01_g05990 Coffea canephora HOM05D001312 ORTHO05D001832 7.8e-46 189.1 405 37.0
Thecc.09G241500 Theobroma cacao HOM05D001312 ORTHO05D001832 1.0e-45 188.7 439 35.3
Sopen11g024890 Solanum pennellii HOM05D001312 ORTHO05D001832 1.7e-45 188.0 347 39.8
Sabra09G0035800 Salix brachista HOM05D001312 ORTHO05D001832 5.1e-45 186.4 414 38.9
MD03G1169900 Malus domestica HOM05D001312 ORTHO05D001832 1.1e-44 185.3 289 42.9
RcHm_v2.0_Chr5g0051171 Rosa chinensis HOM05D001312 ORTHO05D001832 2.5e-44 184.1 305 41.3
Solyc11g065160.3 Solanum lycopersicum HOM05D001312 ORTHO05D001832 2.5e-44 184.1 346 39.3
Manes.14G005800 Manihot esculenta HOM05D001312 ORTHO05D001832 9.5e-44 182.2 322 41.0
Nitab4.5_0002726g0060 Nicotiana tabacum HOM05D001312 ORTHO05D001832 3.6e-43 180.3 347 39.5
SGA_v2.0_scaffold29G12279 Striga asiatica HOM05D001312 ORTHO05D001832 2.3e-42 177.6 307 40.7
Haze_23185 Corylus avellana HOM05D001312 ORTHO05D001832 3.1e-42 177.2 285 43.5
Potri.001G254300 Populus trichocarpa HOM05D001312 ORTHO05D001832 3.1e-42 177.2 373 38.9
Atru.chr3.2620 Acer truncatum HOM05D001312 ORTHO05D001832 5.2e-42 176.4 444 33.8
MD11G1187100 Malus domestica HOM05D001312 ORTHO05D001832 6.8e-42 176.0 288 39.6
Manes.06G161100 Manihot esculenta HOM05D001312 ORTHO05D001832 2.6e-41 174.1 288 40.3
Oeu038110.1 Olea europaea HOM05D001312 ORTHO05D001832 1.3e-40 171.8 312 39.4
COL.COLO4_36486 Corchorus olitorius HOM05D001312 ORTHO05D008204 1.9e-39 167.9 354 35.6
TAR623G0760 Trochodendron aralioides HOM05D001312 ORTHO05D001832 2.4e-39 167.5 435 32.0
MSTRG.21358 Avicennia marina HOM05D001312 ORTHO05D001832 3.2e-39 167.2 337 38.6
Cfa009825 Carpinus fangiana HOM05D001312 ORTHO05D001832 1.7e-37 161.4 280 42.1
FvH4_3g28290 Fragaria vesca HOM05D001312 ORTHO05D001832 8.6e-37 159.1 309 38.5
Sabra16G0155000 Salix brachista HOM05D001312 ORTHO05D001832 8.6e-37 159.1 413 34.9
Migut.D00642 Erythranthe guttata HOM05D001312 ORTHO05D001832 1.1e-36 158.7 337 38.0
Nitab4.5_0006878g0030 Nicotiana tabacum HOM05D001312 ORTHO05D001832 1.1e-36 158.7 347 38.3
Oeu001484.2 Olea europaea HOM05D001312 ORTHO05D001832 1.5e-36 158.3 255 42.0
FAN11G1475 Fragaria x ananassa HOM05D001312 ORTHO05D001832 1.9e-36 157.9 307 38.8
Gorai.001G136300 Gossypium raimondii HOM05D001312 ORTHO05D001832 4.3e-36 156.8 255 40.8
ClCG03G012960 Citrullus lanatus HOM05D001312 ORTHO05D001832 5.6e-36 156.4 279 39.8
Gohir.D07G126400 Gossypium hirsutum HOM05D001312 ORTHO05D001832 9.6e-36 155.6 255 40.4
Lj3g0017534 Lotus japonicus HOM05D001312 ORTHO05D001832 1.2e-35 155.2 305 36.4
QL01p018031 Quercus lobata HOM05D001312 ORTHO05D001832 3.6e-35 153.7 288 38.2
Gohir.A07G122300 Gossypium hirsutum HOM05D001312 ORTHO05D001832 4.7e-35 153.3 262 40.1
TWI39G0267 Tripterygium wilfordii HOM05D001312 ORTHO05D001832 1.4e-34 151.8 429 32.4
Gohir.D07G126500 Gossypium hirsutum HOM05D001312 ORTHO05D001832 2.4e-34 151.0 260 38.8
TWI23G1095 Tripterygium wilfordii HOM05D001312 ORTHO05D001832 5.2e-34 149.8 261 39.1
Glyma.12G021900 Glycine max HOM05D001312 ORTHO05D001832 1.2e-33 148.7 302 36.1
CsaV3_1G043090 Cucumis sativus L. HOM05D001312 ORTHO05D001832 4.4e-33 146.7 265 40.0
FAN16G2548 Fragaria x ananassa HOM05D001312 ORTHO05D001832 5.8e-33 146.4 309 37.5
Gohir.A07G122400 Gossypium hirsutum HOM05D001312 ORTHO05D001832 9.9e-33 145.6 263 37.6
MELO3C015157.2 Cucumis melo HOM05D001312 ORTHO05D001832 1.3e-32 145.2 249 41.4
FAN21G0684 Fragaria x ananassa HOM05D001312 ORTHO05D008204 1.3e-32 145.2 309 36.6
Glyma.11G095800 Glycine max HOM05D001312 ORTHO05D001832 2.2e-32 144.4 305 35.7
FAN25G1359 Fragaria x ananassa HOM05D001312 ORTHO05D001832 4.9e-32 143.3 309 37.2
Gorai.001G136400 Gossypium raimondii HOM05D001312 ORTHO05D001832 4.9e-32 143.3 260 38.1
TPR.G22567 Trifolium pratense HOM05D001312 ORTHO05D001832 1.1e-31 142.1 298 37.2
Eucgr.J00728 Eucalyptus grandis HOM05D001312 ORTHO05D001832 1.4e-31 141.7 324 35.2
arahy.Tifrunner.gnm1.ann1.9N20R9 Arachis hypogaea HOM05D001312 ORTHO05D001832 3.2e-31 140.6 307 35.2
Actinidia16356 Actinidia chinensis HOM05D001312 ORTHO05D001832 5.4e-31 139.8 108 71.3
Lsat_1_v5_gn_6_71181 Lactuca sativa HOM05D001312 ORTHO05D001832 5.4e-31 139.8 267 37.5
EL10Ac4g10179 Beta vulgaris HOM05D001312 ORTHO05D001832 9.3e-31 139.0 307 33.6
arahy.Tifrunner.gnm1.ann1.BS1MHB Arachis hypogaea HOM05D001312 ORTHO05D001832 2.7e-30 137.5 306 35.0
SGA_v2.0_scaffold8G04558 Striga asiatica HOM05D001312 ORTHO05D001832 6.0e-30 136.3 280 38.9
Phvul.011G023900 Phaseolus vulgaris HOM05D001312 ORTHO05D001832 1.0e-29 135.6 302 34.8
VMungo1127G2034 Vigna mungo HOM05D001312 ORTHO05D001832 1.3e-29 135.2 302 34.1
Lalb_Chr03g0024551 Lupinus albus HOM05D001312 ORTHO05D001832 8.7e-29 132.5 314 35.0
Ah.06g194370 Amaranthus hybridus HOM05D001312 ORTHO05D001832 1.1e-28 132.1 271 35.8
Sed0027883 Sechium edule HOM05D001312 ORTHO05D001832 7.3e-28 129.4 255 37.6
Lalb_Chr19g0139691 Lupinus albus HOM05D001312 ORTHO05D001832 9.6e-28 129.0 318 34.0
Dinv36206 Davidia involucrata HOM05D001312 ORTHO05D001832 6.2e-27 126.3 487 26.5
Psat7g179760 Pisum sativum HOM05D001312 ORTHO05D001832 6.2e-27 126.3 298 35.9
ECA233G2461 Erigeron canadensis HOM05D001312 ORTHO05D001832 8.1e-27 125.9 331 36.3
Cpa.g.sc84.8 Carica papaya HOM05D001312 ORTHO05D001832 1.8e-26 124.8 165 47.3
Migut.N02359 Erythranthe guttata HOM05D001312 ORTHO05D001832 5.3e-26 123.2 187 43.9
Hund21993 Selenicereus undatus HOM05D001312 ORTHO05D001832 2.6e-25 120.9 503 26.6
Ciclev10014020m.g Citrus clementina HOM05D001312 ORTHO05D001832 7.6e-25 119.4 412 28.4
Lj1A305G17 Lonicera japonica HOM05D001312 ORTHO05D001832 1.3e-24 118.6 248 35.5
Medtr4g076180 Medicago truncatula HOM05D001312 ORTHO05D001832 9.3e-23 112.5 280 35.0
Gohir.A07G122500 Gossypium hirsutum HOM05D001312 ORTHO05D001832 2.1e-22 111.3 187 39.0
AUR62000168 Chenopodium quinoa HOM05D001312 ORTHO05D001832 3.0e-21 107.5 314 31.8
Nn7g36465 Nelumbo nucifera HOM05D001312 ORTHO05D001832 2.5e-20 104.4 521 27.3
Aqoxy2G00289 Aquilegia oxysepala HOM05D001312 ORTHO05D001832 9.6e-20 102.4 268 32.5
AUR62039843 Chenopodium quinoa HOM05D001312 ORTHO05D001832 1.3e-19 102.1 311 30.9
PGR119G2014 Punica granatum HOM05D001312 ORTHO05D001832 4.8e-19 100.1 317 31.9
Ca_18983_v3 Cicer arietinum L. HOM05D001312 ORTHO05D001832 2.4e-18 97.8 237 34.6
PSO384G1094 Papaver somniferum HOM05D001312 ORTHO05D001832 2.4e-15 87.8 509 24.4
BcaNung01192 Brassica carinata HOM05D001312 ORTHO05D001832 7.1e-15 86.3 269 31.2
BolC2t06519H Brassica oleracea HOM05D001312 ORTHO05D001832 7.1e-15 86.3 269 31.2
C02p05740 Brassica napus HOM05D001312 ORTHO05D001832 1.2e-14 85.5 269 30.5
THA.LOC104811188 Tarenaya hassleriana HOM05D001312 ORTHO05D001832 6.0e-14 83.2 267 31.1
Aa31LG3G14830 Aethionema arabicum HOM05D001312 ORTHO05D001832 1.8e-13 81.6 268 32.5
A02p01520 Brassica napus HOM05D001312 ORTHO05D001832 1.8e-13 81.6 270 29.6
BcaNung03620 Brassica carinata HOM05D001312 ORTHO05D001832 5.1e-13 80.1 261 29.9
BraA02t05132Z Brassica rapa HOM05D001312 ORTHO05D001832 6.7e-13 79.7 270 30.0
PSO339G2353 Papaver somniferum HOM05D001312 ORTHO05D001832 8.7e-13 79.3 506 23.3
HanXRQChr12g0378141 Helianthus annuus HOM05D001312 ORTHO05D001832 2.5e-12 77.8 377 28.9
AL6G23200 Arabidopsis lyrata HOM05D001312 ORTHO05D001832 3.3e-12 77.4 269 30.9
CARHR200700 Cardamine hirsuta HOM05D001312 ORTHO05D001832 6.2e-11 73.2 274 29.6
Carub.0006s1090 Capsella rubella HOM05D001312 ORTHO05D001832 2.4e-10 71.2 272 29.4
Thhalv10012427m.g Eutrema salsugineum HOM05D001312 ORTHO05D001832 4.0e-10 70.5 273 29.3
BcaB01g05404 Brassica carinata HOM05D001312 ORTHO05D001832 1.2e-09 68.9 245 30.2
AT5G12400 Arabidopsis thaliana HOM05D001312 ORTHO05D001832 2.0e-09 68.2 272 28.7
Zm00001eb329910 Zea mays HOM05D001312 ORTHO05D001832 1.6e-06 58.5 281 24.6
ATR0721G002 Amborella trichopoda HOM05D001312 ORTHO05D001832 2.7e-06 57.8 373 23.1


User provided reference genes

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