Gene: Sopen11g024890

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g024890
  • Transcript Identifier Sopen11g024890.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 60158524-60171781 : positive

Gene Family Information

  • ID HOM05D001312
  • #Genes/#Species 478/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g024890.1

Descriptions

  • Description DNA binding, zinc ion binding, DNA binding | FUNCTIONS IN: DNA binding, zinc ion binding | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif , DDT domain , Zinc finger, PHD-type, conserved site , Zinc finger, PHD-type , DDT domain superfamily , DDT domain, subgroup , Zinc finger, FYVE/PHD-type , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: PHD finger family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

No GO associations found for this gene.
InterPro Description
IPR011011 Zinc finger, FYVE/PHD-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
12.4.2.2.1 Chromatin organisation.nucleosome remodeling.ISWI chromatin remodeling complexes.ISWI-CDM complex.component DDP
15.5.29 RNA biosynthesis.transcriptional regulation.transcription factor (PHD)