Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033423 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 1.1e-184 649.8 321 100.0
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 1.2e-175 619.8 334 93.7
Actinidia33290 Actinidia chinensis HOM05D006268 ORTHO05D008118 7.3e-141 504.2 336 76.8
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 6.2e-140 501.1 338 75.4
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 4.6e-135 485.0 338 72.8
GSVIVG01016051001 Vitis vinifera HOM05D006268 ORTHO05D008118 7.1e-128 461.1 329 70.8
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 1.5e-125 453.4 335 69.6
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 7.4e-125 451.1 337 67.7
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 9.6e-125 450.7 332 70.2
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 2.8e-124 449.1 336 69.6
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 1.8e-123 446.4 334 68.6
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 2.4e-123 446.0 331 68.6
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 5.3e-123 444.9 333 67.9
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 1.5e-122 443.4 332 69.0
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 2.0e-122 443.0 336 67.6
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 9.9e-122 440.7 333 67.6
Potri.002G238300 Populus trichocarpa HOM05D006268 ORTHO05D008118 4.9e-121 438.3 332 66.6
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 8.4e-121 437.6 332 68.1
Glyma.03G093200 Glycine max HOM05D006268 ORTHO05D008118 3.2e-120 435.6 328 66.8
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 1.2e-119 433.7 333 67.3
FvH4_7g08020 Fragaria vesca HOM05D006268 ORTHO05D008118 2.1e-119 433.0 331 68.0
Glyma.16G080700 Glycine max HOM05D006268 ORTHO05D008118 4.6e-119 431.8 328 66.5
Sed0013667 Sechium edule HOM05D006268 ORTHO05D008118 7.9e-119 431.0 328 65.5
FAN06G0712 Fragaria x ananassa HOM05D006268 ORTHO05D008118 2.3e-118 429.5 332 67.8
FAN03G0807 Fragaria x ananassa HOM05D006268 ORTHO05D008118 3.0e-118 429.1 332 67.5
Prupe.2G109200 Prunus persica HOM05D006268 ORTHO05D008118 1.9e-117 426.4 328 64.6
MD00G1098400 Malus domestica HOM05D006268 ORTHO05D008118 2.5e-117 426.0 329 67.2
TWI59G0917 Tripterygium wilfordii HOM05D006268 ORTHO05D008118 2.5e-117 426.0 325 64.9
RcHm_v2.0_Chr1g0341291 Rosa chinensis HOM05D006268 ORTHO05D008118 5.6e-117 424.9 330 67.3
SalBow4G0743 Salvia bowleyana HOM05D006268 ORTHO05D008118 7.4e-117 424.5 330 65.2
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 1.6e-116 423.3 337 64.4
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 2.8e-116 422.5 329 64.7
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 3.7e-116 422.2 335 65.1
VMungo0331G0592 Vigna mungo HOM05D006268 ORTHO05D008118 8.2e-116 421.0 329 64.7
Sabra02G0181600 Salix brachista HOM05D006268 ORTHO05D008118 1.8e-115 419.9 331 64.4
CANSAT54G1338 Cannabis sativa HOM05D006268 ORTHO05D008118 3.1e-115 419.1 335 65.4
Nn1g00551 Nelumbo nucifera HOM05D006268 ORTHO05D008118 4.0e-115 418.7 332 64.5
Eucgr.D01130 Eucalyptus grandis HOM05D006268 ORTHO05D008118 1.5e-114 416.8 332 65.7
Lalb_Chr07g0194551 Lupinus albus HOM05D006268 ORTHO05D008118 2.0e-114 416.4 330 64.2
Ciclev10021110m.g Citrus clementina HOM05D006268 ORTHO05D008118 4.5e-114 415.2 327 64.5
Gorai.N008000 Gossypium raimondii HOM05D006268 ORTHO05D008118 4.5e-114 415.2 331 64.0
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 2.9e-113 412.5 331 65.0
Gohir.A06G169600 Gossypium hirsutum HOM05D006268 ORTHO05D008118 3.8e-113 412.1 334 63.5
Cc02_g26120 Coffea canephora HOM05D006268 ORTHO05D008118 6.5e-113 411.4 335 63.3
MELO3C006233.2 Cucumis melo HOM05D006268 ORTHO05D008118 8.4e-113 411.0 332 64.2
FAN01G0355 Fragaria x ananassa HOM05D006268 ORTHO05D008118 1.1e-112 410.6 376 59.6
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 1.4e-112 410.2 331 64.4
Duzib128G0100 Durio zibethinus HOM05D006268 ORTHO05D008118 4.2e-112 408.7 347 61.4
Psat4g207400 Pisum sativum HOM05D006268 ORTHO05D008118 1.2e-111 407.1 330 63.3
CsaV3_3G010120 Cucumis sativus L. HOM05D006268 ORTHO05D008118 1.6e-111 406.8 332 63.9
QL04p024264 Quercus lobata HOM05D006268 ORTHO05D008118 1.6e-111 406.8 355 61.1
Sc26g0001930 Simmondsia chinensis HOM05D006268 ORTHO05D008118 2.1e-111 406.4 333 62.5
COL.COLO4_19510 Corchorus olitorius HOM05D006268 ORTHO05D006513 2.3e-110 402.9 327 64.2
PSO063G1446 Papaver somniferum HOM05D006268 ORTHO05D008118 2.3e-110 402.9 331 61.6
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 3.0e-110 402.5 331 61.6
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 1.1e-109 400.6 333 64.3
Atru.BG.53.p Acer truncatum HOM05D006268 ORTHO05D008118 1.3e-108 397.1 318 66.0
HanXRQChr04g0123661 Helianthus annuus HOM05D006268 ORTHO05D008118 6.3e-108 394.8 331 62.8
Ah.06g189690 Amaranthus hybridus HOM05D006268 ORTHO05D008118 5.3e-107 391.7 345 59.7
EL10Ac1g00692 Beta vulgaris HOM05D006268 ORTHO05D008118 5.3e-107 391.7 332 60.2
AUR62023342 Chenopodium quinoa HOM05D006268 ORTHO05D008118 5.3e-107 391.7 332 60.5
Medtr8g010550 Medicago truncatula HOM05D006268 ORTHO05D008118 5.9e-106 388.3 340 59.7
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 2.2e-105 386.3 332 60.8
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 2.2e-105 386.3 332 60.8
Lsat_1_v5_gn_7_10860 Lactuca sativa HOM05D006268 ORTHO05D008118 6.5e-105 384.8 328 61.9
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 2.5e-101 372.9 329 58.7
Aa31LG11G10 Aethionema arabicum HOM05D006268 ORTHO05D008118 5.7e-101 371.7 334 56.9
THA.LOC104799599 Tarenaya hassleriana HOM05D006268 ORTHO05D008118 1.7e-100 370.2 321 60.4
unitig_22.g5778 Utricularia gibba HOM05D006268 ORTHO05D008118 1.7e-100 370.2 333 59.2
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 3.7e-100 369.0 318 61.6
ClCG05G002670 Citrullus lanatus HOM05D006268 ORTHO05D008118 3.7e-100 369.0 331 58.3
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 6.3e-100 368.2 318 61.6
Thhalv10014126m.g Eutrema salsugineum HOM05D006268 ORTHO05D008118 2.4e-99 366.3 331 57.1
A02p07860 Brassica napus HOM05D006268 ORTHO05D008118 1.2e-98 364.0 325 57.2
BcaB05g22409 Brassica carinata HOM05D006268 ORTHO05D008118 3.4e-98 362.5 325 56.9
AL8G34320 Arabidopsis lyrata HOM05D006268 ORTHO05D008118 4.5e-98 362.1 333 56.5
BraA02t05859Z Brassica rapa HOM05D006268 ORTHO05D008118 4.5e-98 362.1 325 57.5
BcaC03g14111 Brassica carinata HOM05D006268 ORTHO05D008118 1.0e-97 360.9 325 57.2
C02p13500 Brassica napus HOM05D006268 ORTHO05D008118 1.7e-97 360.1 325 57.2
BolC2t07462H Brassica oleracea HOM05D006268 ORTHO05D008118 1.7e-97 360.1 325 57.2
ATR0049G059 Amborella trichopoda HOM05D006268 ORTHO05D008118 1.1e-96 357.5 339 55.2
Manes.08G055700 Manihot esculenta HOM05D006268 ORTHO05D008118 2.1e-95 353.2 293 62.5
Os03g0390700 Oryza sativa ssp. japonica HOM05D006268 ORTHO05D008118 4.7e-95 352.1 325 57.8
Sp6g19880 Schrenkiella parvula HOM05D006268 ORTHO05D008118 1.8e-94 350.1 331 55.3
HPP92_028001 Vanilla planifolia HOM05D006268 ORTHO05D008118 5.1e-94 348.6 320 56.6
CARHR272020 Cardamine hirsuta HOM05D006268 ORTHO05D008118 7.4e-93 344.7 331 55.9
AUR62013813 Chenopodium quinoa HOM05D006268 ORTHO05D008118 1.2e-90 337.4 329 53.2
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 2.6e-90 336.3 240 72.1
AT5G58220 Arabidopsis thaliana HOM05D006268 ORTHO05D008118 4.5e-90 335.5 335 53.7
Zm00001eb392560 Zea mays HOM05D006268 ORTHO05D008118 1.1e-88 330.9 318 57.2
SEGI_16160 Sequoiadendron giganteum HOM05D006268 ORTHO05D008118 3.2e-88 329.3 350 51.4
Carub.0008s1876 Capsella rubella HOM05D006268 ORTHO05D008118 4.2e-88 328.9 331 52.6
FAN10G2079 Fragaria x ananassa HOM05D006268 ORTHO05D008118 2.3e-86 323.2 287 60.3
TPR.G9770 Trifolium pratense HOM05D006268 ORTHO05D008118 3.0e-86 322.8 337 50.7
ECA236G2174 Erigeron canadensis HOM05D006268 ORTHO05D008118 1.5e-85 320.5 303 57.8
SGA_v2.0_scaffold95G28736 Striga asiatica HOM05D006268 ORTHO05D008118 1.4e-78 297.4 245 65.3
Pp3c4_10360 Physcomitrium patens HOM05D006268 ORTHO05D008118 9.7e-77 291.2 330 50.0
SMO367G0371 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 3.4e-69 266.2 359 41.2
CDE04G2879 Ceratophyllum demersum HOM05D006268 ORTHO05D008118 3.8e-65 252.7 269 49.1
Mapoly0090s0043 Marchantia polymorpha HOM05D006268 ORTHO05D008118 3.3e-64 249.6 337 43.6
CBR_g30589 Chara braunii HOM05D006268 ORTHO05D008118 2.8e-60 236.5 466 36.1
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis HOM05D006268 ORTHO05D008118 9.2e-59 231.5 309 44.0
Lj7C555T10 Lonicera japonica HOM05D006268 ORTHO05D008118 2.0e-58 230.3 150 73.3
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 2.9e-57 226.5 183 65.6
BcaB05g22411 Brassica carinata HOM05D006268 ORTHO05D008118 4.4e-53 212.6 187 60.4
Cre17.g735950 Chlamydomonas reinhardtii HOM05D006268 ORTHO05D008118 3.5e-50 203.0 335 37.6
PRCOL_00004243 Prasinoderma coloniale HOM05D006268 ORTHO05D008118 2.3e-46 190.3 332 38.0
DCAR_025012 Daucus carota HOM05D006268 ORTHO05D008118 4.6e-42 176.0 167 59.3
SHI28983 Sapria himalayana HOM05D006268 ORTHO05D008118 4.9e-36 156.0 160 48.8
Sc26g0001910 Simmondsia chinensis HOM05D006268 ORTHO05D008118 4.1e-35 152.9 147 53.1
Cpa.g.sc74.89 Carica papaya HOM05D006268 ORTHO05D008118 4.3e-32 142.9 163 50.3
SMO197G0011 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 6.8e-30 135.6 142 47.9
SMO367G0431 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 8.9e-30 135.2 168 41.7
BolC9t57859H Brassica oleracea HOM05D006268 ORTHO05D008118 5.4e-27 125.9 81 72.8
Oeu050272.1 Olea europaea HOM05D006268 ORTHO05D008118 7.1e-27 125.6 80 72.5
MCO07G440 Micromonas commoda HOM05D006268 ORTHO05D008118 9.0e-22 108.6 150 41.3
Hma1.2p1_0076F.1_g039600 Hydrangea macrophylla HOM05D006268 ORTHO05D008118 1.2e-21 108.2 60 78.3
MCO05G065 Micromonas commoda HOM05D006268 ORTHO05D008118 3.3e-16 90.1 132 40.2
Cfa010995 Carpinus fangiana HOM05D006268 ORTHO05D008118 3.6e-15 86.7 60 70.0
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 9.0e-14 82.0 70 54.3
BcaC04g19902 Brassica carinata HOM05D006268 ORTHO05D008118 4.5e-13 79.7 57 64.9
MD02G1236900 Malus domestica HOM05D006268 ORTHO05D008118 1.7e-12 77.8 133 41.4
Dinv43550 Davidia involucrata HOM05D006268 ORTHO05D008118 6.4e-12 75.9 60 71.7
C09p50070 Brassica napus HOM05D006268 ORTHO05D008118 1.8e-06 57.8 81 43.2


User provided reference genes

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