Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033092 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 0.0e+00 1402.9 844 100.0
CSS0017834 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 0.0e+00 1398.6 844 99.8
Actinidia37752 Actinidia chinensis HOM05D004426 ORTHO05D005417 1.0e-279 966.8 839 70.0
Dinv12344 Davidia involucrata HOM05D004426 ORTHO05D005417 1.3e-258 896.7 838 69.2
GSVIVG01020162001 Vitis vinifera HOM05D004426 ORTHO05D005417 2.7e-227 792.7 845 62.2
vmacro07479 Vaccinium macrocarpon HOM05D004426 ORTHO05D005417 4.5e-222 775.4 817 62.7
Haze_20162 Corylus avellana HOM05D004426 ORTHO05D005417 1.7e-192 677.2 848 57.7
QL07p036440 Quercus lobata HOM05D004426 ORTHO05D005417 1.8e-191 673.7 832 57.6
Cc06_g06650 Coffea canephora HOM05D004426 ORTHO05D005417 9.1e-191 671.4 822 56.2
Manes.09G046200 Manihot esculenta HOM05D004426 ORTHO05D005417 3.0e-186 656.4 840 53.9
Prupe.7G093800 Prunus persica HOM05D004426 ORTHO05D005417 3.0e-186 656.4 841 55.3
Potri.016G069100 Populus trichocarpa HOM05D004426 ORTHO05D005417 4.1e-183 646.0 843 54.2
Sopen03g029610 Solanum pennellii HOM05D004426 ORTHO05D005417 4.1e-183 646.0 834 56.8
Cfa020044 Carpinus fangiana HOM05D004426 ORTHO05D005417 7.0e-183 645.2 841 57.6
Atru.chr8.1340 Acer truncatum HOM05D004426 ORTHO05D005417 5.0e-181 639.0 844 52.3
CAN.G861.37 Capsicum annuum HOM05D004426 ORTHO05D005417 7.2e-180 635.2 807 57.2
Solyc03g020020.3 Solanum lycopersicum HOM05D004426 ORTHO05D005417 9.4e-180 634.8 834 56.6
Thecc.05G105900 Theobroma cacao HOM05D004426 ORTHO05D005417 2.7e-179 633.3 841 52.0
CiPaw.10G018400 Carya illinoinensis HOM05D004426 ORTHO05D005417 8.0e-179 631.7 841 54.0
RcHm_v2.0_Chr3g0476141 Rosa chinensis HOM05D004426 ORTHO05D005417 1.4e-178 630.9 806 54.6
Lj1A1205G57 Lonicera japonica HOM05D004426 ORTHO05D005417 1.5e-177 627.5 812 56.2
TAR369G0229 Trochodendron aralioides HOM05D004426 ORTHO05D005417 1.5e-177 627.5 906 52.9
COL.COLO4_29556 Corchorus olitorius HOM05D004426 ORTHO05D005417 7.5e-177 625.2 809 55.4
TAR375G1129 Trochodendron aralioides HOM05D004426 ORTHO05D005417 6.3e-176 622.1 918 51.5
CANSAT64G0287 Cannabis sativa HOM05D004426 ORTHO05D005417 5.4e-175 619.0 838 51.7
Cpa.g.sc104.21 Carica papaya HOM05D004426 ORTHO05D005417 5.9e-174 615.5 806 52.0
Glyma.02G195600 Glycine max HOM05D004426 ORTHO05D005417 2.9e-173 613.2 836 52.9
Nitab4.5_0004363g0030 Nicotiana tabacum HOM05D004426 ORTHO05D005417 6.6e-173 612.1 808 55.3
Gorai.009G393700 Gossypium raimondii HOM05D004426 ORTHO05D005417 3.0e-170 603.2 846 50.4
Gohir.D04G091700 Gossypium hirsutum HOM05D004426 ORTHO05D005417 6.8e-170 602.1 846 51.1
Sabra16G0070000 Salix brachista HOM05D004426 ORTHO05D005417 6.8e-170 602.1 854 50.6
Ciclev10010887m.g Citrus clementina HOM05D004426 ORTHO05D005417 1.3e-168 597.8 845 51.1
Nitab4.5_0001495g0100 Nicotiana tabacum HOM05D004426 ORTHO05D005417 9.2e-167 591.7 809 53.2
Gohir.A04G053650 Gossypium hirsutum HOM05D004426 ORTHO05D005417 1.6e-166 590.9 843 49.1
Peaxi162Scf00171g00133 Petunia axillaris HOM05D004426 ORTHO05D005417 2.7e-166 590.1 769 55.3
FAN05G5173 Fragaria x ananassa HOM05D004426 ORTHO05D005417 4.6e-166 589.3 808 51.7
FAN05G1531 Fragaria x ananassa HOM05D004426 ORTHO05D005417 5.9e-166 589.0 808 52.0
TWI74G0602 Tripterygium wilfordii HOM05D004426 ORTHO05D005417 7.8e-166 588.6 838 51.1
FvH4_6g20410 Fragaria vesca HOM05D004426 ORTHO05D005417 1.3e-165 587.8 807 51.9
Ca_11691_v3 Cicer arietinum L. HOM05D004426 ORTHO05D005417 3.0e-165 586.6 803 52.6
Lalb_Chr06g0172651 Lupinus albus HOM05D004426 ORTHO05D005417 2.8e-163 580.1 839 50.5
Lj5g0003460 Lotus japonicus HOM05D004426 ORTHO05D005417 4.7e-163 579.3 843 50.9
FAN09G4366 Fragaria x ananassa HOM05D004426 ORTHO05D005417 8.0e-163 578.6 807 51.7
FAN14G5903 Fragaria x ananassa HOM05D004426 ORTHO05D005417 8.0e-163 578.6 807 51.7
arahy.Tifrunner.gnm1.ann1.C5PQVK Arachis hypogaea HOM05D004426 ORTHO05D005417 5.2e-162 575.9 837 50.3
arahy.Tifrunner.gnm1.ann1.S879XT Arachis hypogaea HOM05D004426 ORTHO05D005417 6.8e-162 575.5 837 50.1
Migut.J00694 Erythranthe guttata HOM05D004426 ORTHO05D005417 6.8e-162 575.5 851 50.3
FAN09G0172 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.5e-161 574.3 807 50.3
Glyma.10G082100 Glycine max HOM05D004426 ORTHO05D005417 2.0e-161 573.9 834 49.8
DCAR_020696 Daucus carota HOM05D004426 ORTHO05D005417 1.7e-160 570.9 806 51.5
TPR.G2812 Trifolium pratense HOM05D004426 ORTHO05D005417 6.4e-160 568.9 802 53.4
FAN02G2855 Fragaria x ananassa HOM05D004426 ORTHO05D005417 7.0e-159 565.5 806 50.1
MSTRG.5892 Avicennia marina HOM05D004426 ORTHO05D005417 6.0e-158 562.4 835 49.1
VMungo0720G0551 Vigna mungo HOM05D004426 ORTHO05D005417 7.8e-158 562.0 802 50.4
Phvul.007G267500 Phaseolus vulgaris HOM05D004426 ORTHO05D005417 5.0e-157 559.3 836 48.9
Oeu035645.2 Olea europaea HOM05D004426 ORTHO05D005417 1.2e-155 554.7 801 51.9
Nn6g34673 Nelumbo nucifera HOM05D004426 ORTHO05D005417 6.2e-155 552.4 907 50.7
MD14G1040500 Malus domestica HOM05D004426 ORTHO05D005417 6.8e-154 548.9 847 51.1
Eucgr.A02578 Eucalyptus grandis HOM05D004426 ORTHO05D005417 2.0e-153 547.4 841 49.2
Duzib093G0840 Durio zibethinus HOM05D004426 ORTHO05D005417 8.3e-152 542.0 839 49.2
ClCG10G018280 Citrullus lanatus HOM05D004426 ORTHO05D005417 2.1e-150 537.3 848 50.7
MELO3C009545.2 Cucumis melo HOM05D004426 ORTHO05D005417 3.5e-150 536.6 817 49.1
Psat6g115600 Pisum sativum HOM05D004426 ORTHO05D005417 1.2e-145 521.5 845 50.7
Medtr1g056800 Medicago truncatula HOM05D004426 ORTHO05D005417 1.1e-143 515.0 837 49.7
CsaV3_3G038030 Cucumis sativus L. HOM05D004426 ORTHO05D005417 7.1e-143 512.3 848 49.9
PSO339G1314 Papaver somniferum HOM05D004426 ORTHO05D005417 2.9e-136 490.3 880 45.9
ECA233G4189 Erigeron canadensis HOM05D004426 ORTHO05D005417 3.8e-136 490.0 819 47.3
Sed0007001 Sechium edule HOM05D004426 ORTHO05D005417 3.8e-136 490.0 845 45.3
PSO384G1970 Papaver somniferum HOM05D004426 ORTHO05D005417 4.9e-136 489.6 881 44.6
Aqoxy1G00646 Aquilegia oxysepala HOM05D004426 ORTHO05D005417 1.9e-135 487.6 921 45.4
MBI03_g28304_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 1.3e-131 474.9 906 42.3
AUR62027347 Chenopodium quinoa HOM05D004426 ORTHO05D005417 1.1e-130 471.9 797 48.2
EL10Ac5g11771 Beta vulgaris HOM05D004426 ORTHO05D005417 9.0e-130 468.8 846 46.7
AUR62040133 Chenopodium quinoa HOM05D004426 ORTHO05D005417 9.9e-129 465.3 810 47.3
Ah.12g059670 Amaranthus hybridus HOM05D004426 ORTHO05D005417 3.8e-128 463.4 836 47.7
THA.LOC104816640 Tarenaya hassleriana HOM05D004426 ORTHO05D005417 9.3e-127 458.8 845 43.4
Sc22g0002960 Simmondsia chinensis HOM05D004426 ORTHO05D005417 1.3e-123 448.4 534 56.0
HanXRQChr13g0398531 Helianthus annuus HOM05D004426 ORTHO05D005417 6.2e-123 446.0 775 47.2
AL3G16340 Arabidopsis lyrata HOM05D004426 ORTHO05D005417 2.0e-121 441.0 842 43.8
Dinv31767 Davidia involucrata HOM05D004426 ORTHO05D005417 4.5e-121 439.9 322 77.3
AT3G05680 Arabidopsis thaliana HOM05D004426 ORTHO05D005417 1.3e-120 438.3 842 42.4
Thhalv10019873m.g Eutrema salsugineum HOM05D004426 ORTHO05D005417 3.8e-120 436.8 808 43.2
Carub.0003s0502 Capsella rubella HOM05D004426 ORTHO05D005417 9.3e-119 432.2 852 43.2
CARHR080130 Cardamine hirsuta HOM05D004426 ORTHO05D005417 8.7e-117 425.6 843 42.7
Sp3g04560 Schrenkiella parvula HOM05D004426 ORTHO05D005417 5.8e-113 412.9 843 41.6
Aa31LG5G16100 Aethionema arabicum HOM05D004426 ORTHO05D005417 4.9e-112 409.8 840 43.0
PGR004G1788 Punica granatum HOM05D004426 ORTHO05D005417 7.9e-110 402.5 851 41.5
BraA03t12600Z Brassica rapa HOM05D004426 ORTHO05D005417 1.8e-109 401.4 808 42.3
A03p34260 Brassica napus HOM05D004426 ORTHO05D005417 5.1e-109 399.8 822 42.0
BcaB04g19244 Brassica carinata HOM05D004426 ORTHO05D005417 1.3e-107 395.2 838 41.4
BolC3t16451H Brassica oleracea HOM05D004426 ORTHO05D005417 1.4e-106 391.7 808 41.2
C03p41680 Brassica napus HOM05D004426 ORTHO05D005417 2.4e-106 391.0 806 41.2
Lsat_1_v5_gn_6_33801 Lactuca sativa HOM05D004426 ORTHO05D005417 8.7e-101 372.5 806 43.7
BcaB04g19248 Brassica carinata HOM05D004426 ORTHO05D005417 1.1e-100 372.1 805 40.9
SGA_v2.0_scaffold115G32146 Striga asiatica HOM05D004426 ORTHO05D005417 8.2e-99 365.9 840 43.1
unitig_578.g15811 Utricularia gibba HOM05D004426 ORTHO05D005417 5.9e-89 333.2 805 37.5
Dinv31766 Davidia involucrata HOM05D004426 ORTHO05D005417 5.7e-84 316.6 462 56.3
Oeu036109.3 Olea europaea HOM05D004426 ORTHO05D005417 4.7e-62 243.8 433 46.0
ATR0665G194 Amborella trichopoda HOM05D004426 ORTHO05D005417 3.0e-61 241.1 710 34.8
HPP92_005908 Vanilla planifolia HOM05D004426 ORTHO05D005417 7.5e-60 236.5 816 38.2
CDE07G0138 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 1.0e-56 226.1 384 42.7
MD12G1041200 Malus domestica HOM05D004426 ORTHO05D005417 4.0e-53 214.2 431 47.3
TPR.G15240 Trifolium pratense HOM05D004426 ORTHO05D005417 1.1e-50 206.1 252 57.5
Os03g0554900 Oryza sativa ssp. japonica HOM05D004426 ORTHO05D005417 1.2e-49 202.6 721 35.4
Psat2g116240 Pisum sativum HOM05D004426 ORTHO05D005417 1.2e-49 202.6 247 52.6
SEGI_22283 Sequoiadendron giganteum HOM05D004426 ORTHO05D005417 1.8e-45 188.7 734 31.2
Zm00001eb220020 Zea mays HOM05D004426 ORTHO05D005417 1.2e-44 186.0 880 31.4
Psat2g116200 Pisum sativum HOM05D004426 ORTHO05D005417 2.8e-38 164.9 163 62.6
Psat5g196200 Pisum sativum HOM05D004426 ORTHO05D005417 1.7e-27 129.0 139 59.0
Actinidia03884 Actinidia chinensis HOM05D004426 ORTHO05D005417 1.5e-23 115.9 135 54.1
Duzib093G0602 Durio zibethinus HOM05D004426 ORTHO05D005417 2.1e-22 112.1 178 39.9
Actinidia03992 Actinidia chinensis HOM05D004426 ORTHO05D005417 8.4e-19 100.1 106 56.6
CDE04G0059 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 8.4e-19 100.1 219 35.2
Psat5g133160 Pisum sativum HOM05D004426 ORTHO05D005417 4.2e-18 97.8 109 56.9
Mapoly0014s0197 Marchantia polymorpha HOM05D004426 ORTHO05D005417 3.0e-16 91.7 276 31.2
Psat5g196160 Pisum sativum HOM05D004426 ORTHO05D005417 7.6e-12 77.0 89 53.9
AagrBONN_evm.TU.Sc2ySwM_368.1933 Anthoceros agrestis HOM05D004426 ORTHO05D005417 6.4e-11 73.9 113 39.8
Pp3c22_17700 Physcomitrium patens HOM05D004426 ORTHO05D005417 6.4e-11 73.9 102 47.1
CDE07G2012 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 1.1e-10 73.2 433 31.6
Psat2g137560 Pisum sativum HOM05D004426 ORTHO05D005417 2.4e-10 72.0 84 52.4
Actinidia03993 Actinidia chinensis HOM05D004426 ORTHO05D005417 8.7e-08 63.5 102 43.1
CDE04G1213 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 5.6e-07 60.8 305 35.1
CBR_g906 Chara braunii HOM05D004426 ORTHO05D005417 2.1e-06 58.9 116 37.9


User provided reference genes

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