Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032914 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 0.0e+00 1088.6 536 100.0
CSS0007657 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 3.9e-296 1020.8 536 93.1
CSS0015305 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 1.2e-260 902.9 538 84.4
CSS0032678 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 1.0e-235 820.1 588 73.5
Rhsim13G0190300 Rhododendron simsii HOM05D002338 ORTHO05D006102 5.6e-218 761.1 536 70.1
Rhsim09G0087800 Rhododendron simsii HOM05D002338 ORTHO05D006102 1.8e-216 756.1 534 70.0
Dinv32217 Davidia involucrata HOM05D002338 ORTHO05D006102 2.6e-215 752.3 537 69.8
Hma1.2p1_0987F.1_g244570 Hydrangea macrophylla HOM05D002338 ORTHO05D006102 2.4e-197 692.6 536 63.2
Lj1P636T28 Lonicera japonica HOM05D002338 ORTHO05D006102 3.4e-191 672.2 540 61.1
Oeu030709.1 Olea europaea HOM05D002338 ORTHO05D006102 3.9e-179 632.1 537 57.9
Cc02_g14860 Coffea canephora HOM05D002338 ORTHO05D006102 4.3e-178 628.6 531 58.9
GSVIVG01021206001 Vitis vinifera HOM05D002338 ORTHO05D006102 1.8e-176 623.2 536 56.7
TAR698G0001 Trochodendron aralioides HOM05D002338 ORTHO05D006102 2.4e-176 622.9 535 57.4
CAN.G943.27 Capsicum annuum HOM05D002338 ORTHO05D006102 4.0e-176 622.1 531 58.6
MSTRG.7403 Avicennia marina HOM05D002338 ORTHO05D006102 7.6e-175 617.8 532 56.8
PGSC0003DMG400004381 Solanum tuberosum HOM05D002338 ORTHO05D006102 3.8e-174 615.5 531 59.7
Peaxi162Scf00753g00411 Petunia axillaris HOM05D002338 ORTHO05D006102 4.2e-173 612.1 533 59.1
QL05p046957 Quercus lobata HOM05D002338 ORTHO05D006102 1.5e-170 603.6 542 55.4
Sopen03g002200 Solanum pennellii HOM05D002338 ORTHO05D006102 1.5e-170 603.6 531 58.4
GSVIVG01026940001 Vitis vinifera HOM05D002338 ORTHO05D006102 2.4e-165 586.3 541 54.3
Manes.06G033800 Manihot esculenta HOM05D002338 ORTHO05D006102 9.3e-165 584.3 535 53.6
CiPaw.10G058500 Carya illinoinensis HOM05D002338 ORTHO05D006102 1.2e-164 583.9 533 56.1
Prupe.4G060500 Prunus persica HOM05D002338 ORTHO05D006102 2.7e-164 582.8 543 54.1
ClCG03G007760 Citrullus lanatus HOM05D002338 ORTHO05D006102 7.9e-164 581.3 529 54.4
SGA_v2.0_scaffold1G00039 Striga asiatica HOM05D002338 ORTHO05D006102 3.0e-163 579.3 534 54.5
Ciclev10031207m.g Citrus clementina HOM05D002338 ORTHO05D006102 2.5e-162 576.2 533 52.0
Glyma.01G042900 Glycine max HOM05D002338 ORTHO05D006102 8.1e-161 571.2 543 53.4
MELO3C002646.2 Cucumis melo HOM05D002338 ORTHO05D006102 9.0e-160 567.8 533 52.7
SalBow4G0953 Salvia bowleyana HOM05D002338 ORTHO05D006102 4.5e-159 565.5 535 53.5
Migut.H00865 Erythranthe guttata HOM05D002338 ORTHO05D006102 5.8e-159 565.1 533 52.9
Nn1g04395 Nelumbo nucifera HOM05D002338 ORTHO05D006102 7.6e-159 564.7 535 53.1
Sed0024643 Sechium edule HOM05D002338 ORTHO05D006102 1.7e-158 563.5 532 53.2
arahy.Tifrunner.gnm1.ann1.2YH6BX Arachis hypogaea HOM05D002338 ORTHO05D006706 4.9e-158 562.0 539 52.5
Lalb_Chr18g0054471 Lupinus albus HOM05D002338 ORTHO05D006102 4.9e-158 562.0 539 52.9
DCAR_005225 Daucus carota HOM05D002338 ORTHO05D006102 6.5e-158 561.6 536 51.5
Cfa000603 Carpinus fangiana HOM05D002338 ORTHO05D006102 1.6e-156 557.0 537 53.6
CsaV3_1G033380 Cucumis sativus L. HOM05D002338 ORTHO05D006102 4.6e-156 555.4 533 51.8
PGR004G1505 Punica granatum HOM05D002338 ORTHO05D006102 1.3e-155 553.9 534 53.2
Haze_06238 Corylus avellana HOM05D002338 ORTHO05D006102 5.1e-155 552.0 538 53.0
Phvul.002G066000 Phaseolus vulgaris HOM05D002338 ORTHO05D006102 3.3e-154 549.3 536 52.2
VMungo1215G0129 Vigna mungo HOM05D002338 ORTHO05D006102 5.7e-154 548.5 538 52.2
Atru.chr2.3891 Acer truncatum HOM05D002338 ORTHO05D006102 7.4e-154 548.1 532 51.5
Ca_00873_v3 Cicer arietinum L. HOM05D002338 ORTHO05D006102 2.1e-153 546.6 533 51.8
Duzib138G0048 Durio zibethinus HOM05D002338 ORTHO05D006102 1.4e-152 543.9 533 52.9
CANSAT54G0294 Cannabis sativa HOM05D002338 ORTHO05D006102 4.1e-152 542.3 533 53.3
Gohir.D11G163900 Gossypium hirsutum HOM05D002338 ORTHO05D006102 5.3e-152 542.0 533 52.9
Lj6g0008317 Lotus japonicus HOM05D002338 ORTHO05D006102 9.0e-152 541.2 543 52.1
Gorai.007G174700 Gossypium raimondii HOM05D002338 ORTHO05D006102 2.6e-151 539.7 533 53.1
Sabra04G0055900 Salix brachista HOM05D002338 ORTHO05D006102 2.9e-150 536.2 535 50.3
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 2.9e-150 536.2 536 50.7
MD05G1301900 Malus domestica HOM05D002338 ORTHO05D006102 8.5e-150 534.6 543 50.5
AUR62031197 Chenopodium quinoa HOM05D002338 ORTHO05D006102 3.2e-149 532.7 540 50.2
unitig_736.g22955 Utricularia gibba HOM05D002338 ORTHO05D006102 4.2e-149 532.3 532 50.8
Cpa.g.sc7.51 Carica papaya HOM05D002338 ORTHO05D006102 1.2e-148 530.8 533 49.5
Lsat_1_v5_gn_4_49520 Lactuca sativa HOM05D002338 ORTHO05D006102 1.8e-147 526.9 536 51.9
TPR.G22268 Trifolium pratense HOM05D002338 ORTHO05D006102 3.0e-147 526.2 539 50.5
Potri.004G084700 Populus trichocarpa HOM05D002338 ORTHO05D006102 3.9e-147 525.8 538 50.2
Medtr2g031410 Medicago truncatula HOM05D002338 ORTHO05D006102 6.7e-147 525.0 539 51.6
AUR62036936 Chenopodium quinoa HOM05D002338 ORTHO05D006102 1.1e-146 524.2 542 48.7
RcHm_v2.0_Chr5g0010711 Rosa chinensis HOM05D002338 ORTHO05D006102 3.3e-146 522.7 531 51.0
COL.COLO4_08893 Corchorus olitorius HOM05D002338 ORTHO05D006102 2.8e-145 519.6 535 52.5
Gohir.A11G156900 Gossypium hirsutum HOM05D002338 ORTHO05D006102 4.8e-145 518.8 533 51.2
TWI38G1256 Tripterygium wilfordii HOM05D002338 ORTHO05D006102 8.2e-145 518.1 451 57.4
AUR62027671 Chenopodium quinoa HOM05D002338 ORTHO05D006102 4.1e-144 515.8 536 48.9
Ah.09g233540 Amaranthus hybridus HOM05D002338 ORTHO05D006102 5.3e-144 515.4 553 48.8
FAN05G5039 Fragaria x ananassa HOM05D002338 ORTHO05D006102 5.3e-144 515.4 534 49.8
FvH4_6g24910 Fragaria vesca HOM05D002338 ORTHO05D006102 1.2e-143 514.2 534 49.8
FAN14G3958 Fragaria x ananassa HOM05D002338 ORTHO05D006102 4.5e-143 512.3 532 49.8
EL10Ac8g20603 Beta vulgaris HOM05D002338 ORTHO05D006102 8.5e-142 508.1 547 48.1
FAN02G0479 Fragaria x ananassa HOM05D002338 ORTHO05D006102 2.7e-140 503.1 526 49.4
FAN05G1035 Fragaria x ananassa HOM05D002338 ORTHO05D006102 6.1e-140 501.9 526 49.2
ECA247G1464 Erigeron canadensis HOM05D002338 ORTHO05D006102 2.3e-139 500.0 535 49.9
PSO675G9291 Papaver somniferum HOM05D002338 ORTHO05D006102 3.0e-139 499.6 533 49.3
HanXRQChr16g0518871 Helianthus annuus HOM05D002338 ORTHO05D006102 6.7e-139 498.4 533 50.5
PSO541G5199 Papaver somniferum HOM05D002338 ORTHO05D006102 8.8e-139 498.0 533 49.3
HanXRQChr16g0520661 Helianthus annuus HOM05D002338 ORTHO05D006102 1.1e-138 497.7 530 51.3
SHI24483 Sapria himalayana HOM05D002338 ORTHO05D006102 1.2e-135 487.6 532 46.6
Aqoxy1G02082 Aquilegia oxysepala HOM05D002338 ORTHO05D006102 1.5e-135 487.3 539 48.1
Thecc.01G169900 Theobroma cacao HOM05D002338 ORTHO05D006102 4.5e-135 485.7 443 55.5
THA.LOC104826474 Tarenaya hassleriana HOM05D002338 ORTHO05D006102 3.9e-131 472.6 551 46.6
Nitab4.5_0002076g0140 Nicotiana tabacum HOM05D002338 ORTHO05D006102 5.2e-131 472.2 530 49.6
THA.LOC104827541 Tarenaya hassleriana HOM05D002338 ORTHO05D006102 3.3e-130 469.5 554 46.6
CARHR243880 Cardamine hirsuta HOM05D002338 ORTHO05D006102 1.4e-128 464.2 544 46.1
Nitab4.5_0007975g0050 Nicotiana tabacum HOM05D002338 ORTHO05D006102 4.5e-127 459.1 515 49.3
AT4G35540 Arabidopsis thaliana HOM05D002338 ORTHO05D006102 5.9e-127 458.8 538 45.5
Sp7g33320 Schrenkiella parvula HOM05D002338 ORTHO05D006102 1.3e-126 457.6 542 44.6
Oeu017495.1 Olea europaea HOM05D002338 ORTHO05D006102 4.2e-125 452.6 536 46.6
Aa31LG6G12510 Aethionema arabicum HOM05D002338 ORTHO05D006102 5.5e-125 452.2 536 44.8
AL7G15620 Arabidopsis lyrata HOM05D002338 ORTHO05D006102 1.8e-123 447.2 541 45.1
Glyma.04G157100 Glycine max HOM05D002338 ORTHO05D006102 4.4e-122 442.6 539 45.8
Nn3g21334 Nelumbo nucifera HOM05D002338 ORTHO05D006102 8.2e-121 438.3 419 53.2
CDE02G4213 Ceratophyllum demersum HOM05D002338 ORTHO05D006102 7.7e-119 431.8 552 42.8
DCAR_030917 Daucus carota HOM05D002338 ORTHO05D006102 7.2e-117 425.2 474 45.8
Thhalv10027569m.g Eutrema salsugineum HOM05D002338 ORTHO05D006102 1.6e-116 424.1 536 42.9
MBI18_g09632_MAGBIO Magnolia biondii HOM05D002338 ORTHO05D006102 1.6e-116 424.1 534 44.0
BraA01t00291Z Brassica rapa HOM05D002338 ORTHO05D006102 3.1e-112 409.8 531 41.8
BcaNung00583 Brassica carinata HOM05D002338 ORTHO05D006102 7.7e-111 405.2 530 41.1
C01p03420 Brassica napus HOM05D002338 ORTHO05D006102 7.7e-111 405.2 530 41.1
BolC1t00329H Brassica oleracea HOM05D002338 ORTHO05D006102 7.7e-111 405.2 530 41.1
A01p03070 Brassica napus HOM05D002338 ORTHO05D006102 1.3e-110 404.4 531 40.3
Lj2A298G34 Lonicera japonica HOM05D002338 ORTHO05D006102 6.5e-110 402.1 489 47.0
BcaB03g12416 Brassica carinata HOM05D002338 ORTHO05D006102 8.8e-107 391.7 532 40.4
Solyc03g006177.2 Solanum lycopersicum HOM05D002338 ORTHO05D006102 4.1e-104 382.9 330 60.3
Sc05g0007130 Simmondsia chinensis HOM05D002338 ORTHO05D006102 8.6e-102 375.2 546 41.0
Migut.M01042 Erythranthe guttata HOM05D002338 ORTHO05D006102 5.4e-96 355.9 511 39.9
ATR0794G026 Amborella trichopoda HOM05D002338 ORTHO05D006102 1.3e-89 334.7 584 38.0
SEGI_17381 Sequoiadendron giganteum HOM05D002338 ORTHO05D006102 3.3e-85 320.1 614 34.2
HanXRQChr16g0518151 Helianthus annuus HOM05D002338 ORTHO05D006102 2.9e-81 307.0 325 52.3
Psat1g166240 Pisum sativum HOM05D002338 ORTHO05D006102 4.9e-81 306.2 317 53.0
Atru.chr10.1675 Acer truncatum HOM05D002338 ORTHO05D006102 2.1e-79 300.8 302 48.7
HanXRQChr16g0517751 Helianthus annuus HOM05D002338 ORTHO05D006102 4.6e-79 299.7 280 52.5
FAN16G2383 Fragaria x ananassa HOM05D002338 ORTHO05D006102 5.2e-75 286.2 282 50.0
TAR627G0524 Trochodendron aralioides HOM05D002338 ORTHO05D006102 1.5e-69 268.1 228 53.5
HPP92_006302 Vanilla planifolia HOM05D002338 ORTHO05D006102 2.5e-69 267.3 419 41.8
Zm00001eb175250 Zea mays HOM05D002338 ORTHO05D006102 5.4e-64 249.6 576 32.6
Pp3c3_11130 Physcomitrium patens HOM05D002338 ORTHO05D006102 6.9e-59 232.6 557 31.4
Mapoly0022s0109 Marchantia polymorpha HOM05D002338 ORTHO05D006102 7.1e-48 196.1 567 27.7
C03p80710 Brassica napus HOM05D002338 ORTHO05D006102 1.9e-45 188.0 297 36.7
BcaC01g00499 Brassica carinata HOM05D002338 ORTHO05D006102 2.1e-44 184.5 387 32.0
AagrBONN_evm.TU.Sc2ySwM_228.3636 Anthoceros agrestis HOM05D002338 ORTHO05D006102 3.4e-42 177.2 555 26.8
SMO137G0058 Selaginella moellendorffii HOM05D002338 ORTHO05D006102 9.7e-37 159.1 319 29.8
Psat6g197040 Pisum sativum HOM05D002338 ORTHO05D006102 1.8e-35 154.8 184 47.8
BcaNung03635 Brassica carinata HOM05D002338 ORTHO05D006102 9.0e-35 152.5 196 37.8
TAR627G0992 Trochodendron aralioides HOM05D002338 ORTHO05D006102 8.2e-28 129.4 144 47.9
BolC3t20316H Brassica oleracea HOM05D002338 ORTHO05D006102 4.1e-27 127.1 132 50.0
Atru.chr10.1674 Acer truncatum HOM05D002338 ORTHO05D006102 1.1e-24 119.0 122 48.4
BcaNung03637 Brassica carinata HOM05D002338 ORTHO05D006102 5.5e-24 116.7 295 27.8
Solyc05g023840.1 Solanum lycopersicum HOM05D002338 ORTHO05D006102 1.2e-23 115.5 130 43.8
Os08g0532500 Oryza sativa ssp. japonica HOM05D002338 ORTHO05D006102 1.8e-19 101.7 212 33.5
SEGI_36544 Sequoiadendron giganteum HOM05D002338 ORTHO05D006102 2.9e-17 94.4 200 34.0
Actinidia16798 Actinidia chinensis HOM05D002338 ORTHO05D006102 1.9e-16 91.7 155 39.4
BcaNung03636 Brassica carinata HOM05D002338 ORTHO05D006102 7.2e-16 89.7 104 40.4
FvH4_3g07850 Fragaria vesca HOM05D009570 ORTHO05D009451 9.4e-16 89.4 91 40.7
Sc05g0007150 Simmondsia chinensis HOM05D002338 ORTHO05D006102 1.4e-14 85.5 69 60.9
FAN05G0140 Fragaria x ananassa HOM05D002338 ORTHO05D006102 3.0e-14 84.3 188 31.4
FAN05G0862 Fragaria x ananassa HOM05D002338 ORTHO05D006102 3.9e-14 84.0 188 31.4
MCO04G551 Micromonas commoda HOM05D002338 ORTHO05D006102 6.3e-12 76.6 181 28.7
FAN06G1043 Fragaria x ananassa HOM05D002338 ORTHO05D006102 2.4e-11 74.7 86 39.5
Pp3c8_20180 Physcomitrium patens HOM05D002702 ORTHO05D003416 1.9e-08 65.1 272 22.4
CBR_g34074 Chara braunii HOM05D000019 ORTHO05D000002 5.5e-08 63.5 68 39.7
FAN14G0023 Fragaria x ananassa HOM05D002338 ORTHO05D006102 5.5e-08 63.5 74 51.4
ATR0794G076 Amborella trichopoda HOM05D002338 ORTHO05D006102 9.4e-08 62.8 65 43.1
AagrBONN_evm.TU.Sc2ySwM_228.5644 Anthoceros agrestis HOM05D002702 ORTHO05D003416 1.6e-07 62.0 268 21.3
TPR.G39999 Trifolium pratense HOM05D002338 ORTHO05D006102 1.6e-07 62.0 61 42.6
ATR0582G311 Amborella trichopoda HOM05D002338 ORTHO05D006102 3.6e-07 60.8 65 49.2
FAN10G3983 Fragaria x ananassa HOM05D002338 ORTHO05D006102 1.0e-06 59.3 60 40.0
FAN02G2027 Fragaria x ananassa HOM05D002338 ORTHO05D006102 1.4e-06 58.9 62 41.9


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