Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032809 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.5e-59 231.9 116 100.0
CSS0035385 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.4e-43 177.2 116 77.6
CSS0028114 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.2e-39 165.6 116 74.1
CSS0036731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.7e-37 157.9 113 69.9
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.0e-36 155.2 113 70.8
CSS0032736 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.0e-35 152.5 111 69.4
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 9.7e-35 150.2 98 72.4
CSS0009370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.1e-33 146.7 98 70.4
CSS0034075 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.5e-32 141.4 116 66.4
CSS0032702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.7e-28 127.5 102 65.7
CSS0044722 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.6e-27 125.6 113 57.5
CSS0048939 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.3e-27 125.2 86 67.4
CSS0023133 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.4e-27 124.8 113 57.5
CSS0010523 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.7e-27 124.4 113 56.6
CSS0045195 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.4e-27 124.0 92 64.1
CSS0032088 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.2e-26 122.5 92 63.0
CSS0026614 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.8e-26 122.1 113 55.8
CSS0027105 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.7e-26 121.7 113 54.0
CSS0041994 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.8e-26 121.3 92 63.0
CSS0043443 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.4e-25 119.0 113 53.1
CSS0016748 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 2.0e-24 115.9 113 53.1
CSS0049818 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.6e-24 115.5 94 62.8
CSS0046575 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-23 112.8 95 60.0
CSS0020468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.5e-23 110.5 113 50.4
CSS0033039 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.1e-22 110.2 93 52.7
CSS0007439 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.2e-22 108.6 111 45.9
CSS0013630 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.0e-20 103.6 84 60.7
CSS0028214 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.0e-20 103.6 94 53.2
CSS0016336 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.8e-20 100.9 90 51.1
CSS0001115 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.8e-18 95.5 113 38.9
CSS0006381 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.7e-18 95.1 79 57.0
CSS0004389 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.4e-17 92.4 95 47.4
CSS0032111 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.5e-16 88.2 95 45.3
CSS0006955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.9e-16 87.8 95 44.2
CSS0002074 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.7e-16 87.4 90 42.2
CSS0020179 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.8e-15 85.1 94 41.5
CSS0045587 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.8e-15 85.1 108 38.0
CSS0045787 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 3.8e-15 85.1 90 43.3
CSS0037140 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-14 83.6 112 34.8
Actinidia35690 Actinidia chinensis HOM05D000003 ORTHO05D000022 5.5e-14 81.3 95 43.2
CSS0047834 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.2e-14 80.9 94 38.3
CSS0014386 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.1e-13 79.3 112 33.0
CSS0010509 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.4e-12 76.6 93 37.6
CSS0016144 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-12 76.6 101 36.6
vmacro08191 Vaccinium macrocarpon HOM05D000548 ORTHO05D000987 1.2e-11 73.6 87 43.7
vmacro14890 Vaccinium macrocarpon HOM05D002989 ORTHO05D003218 9.8e-11 70.5 90 36.7
vmacro08980 Vaccinium macrocarpon HOM05D000055 ORTHO05D002202 1.3e-10 70.1 95 36.8
vmacro19136 Vaccinium macrocarpon HOM05D001065 ORTHO05D003103 2.2e-10 69.3 92 38.0
CSS0007605 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.8e-10 68.9 108 33.3
Hma1.2p1_0333F.1_g128210 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 4.8e-10 68.2 93 39.8
Hma1.2p1_3263F.1_g334663 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 4.8e-10 68.2 93 39.8
Hma1.2p1_3263F.1_g334666 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 4.8e-10 68.2 93 39.8
vmacro01816 Vaccinium macrocarpon HOM05D000489 ORTHO05D000372 8.3e-10 67.4 85 36.5
CSS0017504 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.4e-09 66.6 69 44.9
Lj1P687T17 Lonicera japonica HOM05D000155 ORTHO05D000022 5.4e-09 64.7 100 36.0
vmacro00861 Vaccinium macrocarpon HOM05D000042 ORTHO05D000980 5.4e-09 64.7 92 39.1
Lj1P685T53 Lonicera japonica HOM05D000155 ORTHO05D000022 9.1e-09 63.9 98 36.7
vmacro09610 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 9.1e-09 63.9 85 36.5
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-08 63.2 91 35.2
Solyc07g056380.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 1.6e-08 63.2 114 33.3
vmacro16872 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 2.0e-08 62.8 83 36.1
Nitab4.5_0007519g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000022 2.7e-08 62.4 113 31.0
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 4.5e-08 61.6 95 31.6
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 4.5e-08 61.6 112 32.1
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 4.5e-08 61.6 85 40.0
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 5.9e-08 61.2 96 34.4
Lj1P688T36 Lonicera japonica HOM05D000155 ORTHO05D000022 5.9e-08 61.2 100 35.0
Nitab4.5_0007388g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000022 5.9e-08 61.2 101 31.7
Atru.chr11.82 Acer truncatum HOM05D000003 ORTHO05D000022 7.7e-08 60.8 95 32.6
CSS0011514 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.7e-08 60.8 46 67.4
Nitab4.5_0012197g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.0e-07 60.5 101 30.7
Psat1g119200 Pisum sativum HOM05D000003 ORTHO05D000022 1.0e-07 60.5 91 36.3
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-07 60.1 95 33.7
CSS0038564 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.3e-07 60.1 71 40.8
Lj9P217T13 Lonicera japonica HOM05D000003 ORTHO05D000022 2.3e-07 59.3 90 34.4
vmacro04810 Vaccinium macrocarpon HOM05D000301 ORTHO05D000022 2.3e-07 59.3 95 30.5
Atru.chr4.29 Acer truncatum HOM05D000003 ORTHO05D000022 2.9e-07 58.9 112 30.4
Phvul.001G128200 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 2.9e-07 58.9 91 37.4
TPR.G32733 Trifolium pratense HOM05D000005 ORTHO05D000012 2.9e-07 58.9 91 35.2
Atru.chr10.1106 Acer truncatum HOM05D000003 ORTHO05D000022 3.8e-07 58.5 95 32.6
vmacro11643 Vaccinium macrocarpon HOM05D000490 ORTHO05D000785 3.8e-07 58.5 97 32.0
vmacro18663 Vaccinium macrocarpon HOM05D000010 ORTHO05D000022 3.8e-07 58.5 69 40.6
CSS0027359 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.0e-07 58.2 90 32.2
Sopen10g006600 Solanum pennellii HOM05D000003 ORTHO05D001349 5.0e-07 58.2 90 37.8
vmacro11435 Vaccinium macrocarpon HOM05D000455 ORTHO05D426981 5.0e-07 58.2 73 41.1
VMungo1383G2358 Vigna mungo HOM05D000005 ORTHO05D000012 5.0e-07 58.2 91 37.4
Atru.chr12.2484 Acer truncatum HOM05D000003 ORTHO05D000022 6.6e-07 57.8 95 34.7
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 6.6e-07 57.8 93 34.4
Lj8C275T19 Lonicera japonica HOM05D016027 ORTHO05D000022 8.6e-07 57.4 75 38.7
Nitab4.5_0000593g0300 Nicotiana tabacum HOM05D000003 ORTHO05D000022 8.6e-07 57.4 74 35.1
vmacro06797 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 8.6e-07 57.4 92 37.0
COL.COLO4_01560 Corchorus olitorius HOM05D022577 ORTHO05D010957 1.1e-06 57.0 87 37.9
COL.COLO4_02464 Corchorus olitorius HOM05D022577 ORTHO05D010957 1.1e-06 57.0 87 37.9
COL.COLO4_03155 Corchorus olitorius HOM05D022577 ORTHO05D010957 1.1e-06 57.0 87 37.9
COL.COLO4_03198 Corchorus olitorius HOM05D022577 ORTHO05D010957 1.1e-06 57.0 87 37.9
vmacro00419 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 1.1e-06 57.0 100 33.0
Atru.chr12.2455 Acer truncatum HOM05D000003 ORTHO05D000022 1.5e-06 56.6 95 32.6
Lj1P723T10 Lonicera japonica HOM05D016027 ORTHO05D010957 1.9e-06 56.2 73 35.6
COL.COLO4_30280 Corchorus olitorius HOM05D000155 ORTHO05D000022 2.5e-06 55.8 91 33.0
Atru.chr1.1905 Acer truncatum HOM05D000003 ORTHO05D000022 3.3e-06 55.5 112 31.2
Sabra09G0061300 Salix brachista HOM05D000003 ORTHO05D000022 3.3e-06 55.5 89 34.8
Sopen10g008360 Solanum pennellii HOM05D000003 ORTHO05D000022 3.3e-06 55.5 96 33.3
Atru.chr2.1419 Acer truncatum HOM05D000003 ORTHO05D000022 4.2e-06 55.1 95 30.5
CSS0039165 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-06 55.1 63 41.3
Atru.chr3.1505 Acer truncatum HOM05D000003 ORTHO05D000022 5.5e-06 54.7 95 31.6
Atru.chr7.890 Acer truncatum HOM05D005989 ORTHO05D000022 5.5e-06 54.7 92 37.0
Medtr7g052220 Medicago truncatula HOM05D008718 ORTHO05D010957 5.5e-06 54.7 82 32.9
vmacro20205 Vaccinium macrocarpon HOM05D002235 ORTHO05D006252 5.5e-06 54.7 80 35.0
Atru.chr11.1308 Acer truncatum HOM05D000003 ORTHO05D000022 7.2e-06 54.3 95 31.6
Lj2C976T3 Lonicera japonica HOM05D000003 ORTHO05D000022 7.2e-06 54.3 90 32.2
QL01p016530 Quercus lobata HOM05D000003 ORTHO05D000022 7.2e-06 54.3 92 33.7
Solyc10g018550.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 7.2e-06 54.3 91 34.1
Actinidia03487 Actinidia chinensis HOM05D000003 ORTHO05D000022 9.5e-06 53.9 74 35.1


User provided reference genes

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