Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031966 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 4.6e-91 337.8 164 100.0
vmacro00375 Vaccinium macrocarpon HOM05D001092 ORTHO05D000923 9.4e-68 260.4 138 90.6
Actinidia25929 Actinidia chinensis HOM05D001092 ORTHO05D000923 1.6e-67 259.6 138 89.9
Rhsim11G0008200 Rhododendron simsii HOM05D001092 ORTHO05D000923 3.6e-67 258.5 138 89.1
Dinv28897 Davidia involucrata HOM05D001092 ORTHO05D000923 2.5e-60 235.7 138 81.2
TAR629G2120 Trochodendron aralioides HOM05D001092 ORTHO05D000923 9.1e-55 217.2 137 78.8
GSVIVG01013268001 Vitis vinifera HOM05D001092 ORTHO05D000923 2.0e-54 216.1 138 77.5
Ciclev10024056m.g Citrus clementina HOM05D001092 ORTHO05D000923 5.0e-53 211.5 139 74.8
Manes.17G019783 Manihot esculenta HOM05D001092 ORTHO05D000923 1.1e-52 210.3 138 72.5
DCAR_000729 Daucus carota HOM05D001092 ORTHO05D000923 1.9e-52 209.5 142 71.8
Cfa012359 Carpinus fangiana HOM05D001092 ORTHO05D000923 1.2e-51 206.8 139 73.4
Oeu033911.2 Olea europaea HOM05D001092 ORTHO05D000923 1.6e-51 206.5 138 71.0
Cc08_g01550 Coffea canephora HOM05D001092 ORTHO05D000923 1.0e-50 203.8 138 68.1
CAN.G1445.5 Capsicum annuum HOM05D001092 ORTHO05D000923 3.0e-50 202.2 138 69.6
Thecc.03G236900 Theobroma cacao HOM05D001092 ORTHO05D000923 4.0e-50 201.8 139 71.9
Solyc08g077490.2 Solanum lycopersicum HOM05D001092 ORTHO05D000923 5.2e-50 201.4 138 69.6
Sopen08g026080 Solanum pennellii HOM05D001092 ORTHO05D000923 5.2e-50 201.4 138 69.6
Nitab4.5_0001255g0080 Nicotiana tabacum HOM05D001092 ORTHO05D000923 8.9e-50 200.7 138 68.8
Atru.chr9.1144 Acer truncatum HOM05D001092 ORTHO05D000923 1.2e-49 200.3 139 71.2
Gohir.A03G003250 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.5e-49 199.9 138 71.7
Duzib205G0058 Durio zibethinus HOM05D001092 ORTHO05D000923 3.4e-49 198.7 139 73.4
Gorai.003G179200 Gossypium raimondii HOM05D001092 ORTHO05D000923 5.7e-49 198.0 138 71.0
ECA246G3294 Erigeron canadensis HOM05D001092 ORTHO05D000923 7.5e-49 197.6 136 70.6
FAN08G1156 Fragaria x ananassa HOM05D001092 ORTHO05D000923 7.5e-49 197.6 166 59.0
PSO063G3710 Papaver somniferum HOM05D001092 ORTHO05D000923 7.5e-49 197.6 139 70.5
Prupe.5G050700 Prunus persica HOM05D001092 ORTHO05D000923 2.2e-48 196.1 138 68.1
Peaxi162Scf00084g00119 Petunia axillaris HOM05D001092 ORTHO05D000923 2.8e-48 195.7 138 66.7
Migut.E00809 Erythranthe guttata HOM05D001092 ORTHO05D000923 3.7e-48 195.3 142 66.2
Cpa.g.sc98.55 Carica papaya HOM05D001092 ORTHO05D000923 4.9e-48 194.9 139 69.8
CiPaw.12G058400 Carya illinoinensis HOM05D001092 ORTHO05D000923 4.9e-48 194.9 139 68.3
TWI60G0589 Tripterygium wilfordii HOM05D001092 ORTHO05D000923 6.3e-48 194.5 143 66.4
Gohir.D03G169100 Gossypium hirsutum HOM05D001092 ORTHO05D000923 8.3e-48 194.1 138 70.3
Nn1g00699 Nelumbo nucifera HOM05D001092 ORTHO05D000923 1.1e-47 193.7 139 68.3
Gorai.004G190500 Gossypium raimondii HOM05D001092 ORTHO05D000923 1.8e-47 193.0 139 71.2
Gohir.A08G161600 Gossypium hirsutum HOM05D001092 ORTHO05D000923 3.1e-47 192.2 139 71.2
MSTRG.1961 Avicennia marina HOM05D001092 ORTHO05D000923 4.1e-47 191.8 138 68.1
Potri.001G148800 Populus trichocarpa HOM05D001092 ORTHO05D000923 5.4e-47 191.4 139 67.6
HanXRQChr17g0535661 Helianthus annuus HOM05D001092 ORTHO05D000923 1.2e-46 190.3 139 66.2
Phvul.002G003000 Phaseolus vulgaris HOM05D001092 ORTHO05D000923 1.2e-46 190.3 139 69.1
FAN04G0578 Fragaria x ananassa HOM05D001092 ORTHO05D000923 1.6e-46 189.9 138 65.9
Lalb_Chr16g0379281 Lupinus albus HOM05D001092 ORTHO05D000923 1.6e-46 189.9 139 69.8
MD06G1043800 Malus domestica HOM05D001092 ORTHO05D000923 1.6e-46 189.9 138 65.2
Sabra01G0118800 Salix brachista HOM05D001092 ORTHO05D000923 1.6e-46 189.9 138 67.4
MBI04_g20742_MAGBIO Magnolia biondii HOM05D001092 ORTHO05D000923 2.7e-46 189.1 142 66.2
PGR031G0629 Punica granatum HOM05D001092 ORTHO05D000923 2.7e-46 189.1 136 69.9
Glyma.11G039900 Glycine max HOM05D001092 ORTHO05D000923 3.5e-46 188.7 139 69.1
COL.COLO4_06705 Corchorus olitorius HOM05D001092 ORTHO05D000923 4.5e-46 188.3 138 72.5
FAN18G3751 Fragaria x ananassa HOM05D001092 ORTHO05D000923 4.5e-46 188.3 138 65.2
MD04G1057200 Malus domestica HOM05D001092 ORTHO05D000923 4.5e-46 188.3 138 65.2
FvH4_5g20820 Fragaria vesca HOM05D001092 ORTHO05D000923 5.9e-46 188.0 138 64.5
Aqoxy3G02588 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 7.8e-46 187.6 138 68.1
SGA_v2.0_scaffold20G09243 Striga asiatica HOM05D001092 ORTHO05D000923 7.8e-46 187.6 142 63.4
RcHm_v2.0_Chr7g0207821 Rosa chinensis HOM05D001092 ORTHO05D000923 1.0e-45 187.2 138 65.9
CANSAT21G2480 Cannabis sativa HOM05D001092 ORTHO05D000923 3.8e-45 185.3 139 64.7
Ca_26022_v3 Cicer arietinum L. HOM05D001092 ORTHO05D000923 6.6e-45 184.5 139 68.3
Ca_30451_v3 Cicer arietinum L. HOM05D001092 ORTHO05D000923 6.6e-45 184.5 139 68.3
arahy.Tifrunner.gnm1.ann1.G3NGVJ Arachis hypogaea HOM05D001092 ORTHO05D000923 3.3e-44 182.2 143 66.4
arahy.Tifrunner.gnm1.ann1.PHJ2IJ Arachis hypogaea HOM05D001092 ORTHO05D000923 3.3e-44 182.2 143 66.4
Sc07g0008990 Simmondsia chinensis HOM05D001092 ORTHO05D000923 5.6e-44 181.4 135 66.7
Lj2g0026983 Lotus japonicus HOM05D001092 ORTHO05D000923 7.3e-44 181.0 139 66.9
THA.LOC104814451 Tarenaya hassleriana HOM05D001092 ORTHO05D000923 2.8e-43 179.1 143 61.5
Lsat_1_v5_gn_3_15901 Lactuca sativa HOM05D001092 ORTHO05D000923 6.1e-43 177.9 134 66.4
ClCG09G012520 Citrullus lanatus HOM05D001092 ORTHO05D000923 3.0e-42 175.6 139 63.3
Psat2g175240 Pisum sativum HOM05D001092 ORTHO05D000923 3.0e-42 175.6 134 67.2
TPR.G33938 Trifolium pratense HOM05D001092 ORTHO05D000923 6.8e-42 174.5 139 64.0
Aa31LG2G13220 Aethionema arabicum HOM05D001092 ORTHO05D000923 8.9e-42 174.1 143 59.4
Haze_08328 Corylus avellana HOM05D001092 ORTHO05D000923 8.9e-42 174.1 139 64.7
MELO3C003359.2 Cucumis melo HOM05D001092 ORTHO05D000923 1.5e-41 173.3 139 65.5
Medtr5g013780 Medicago truncatula HOM05D001092 ORTHO05D000923 4.4e-41 171.8 139 63.3
CsaV3_3G049680 Cucumis sativus L. HOM05D001092 ORTHO05D000923 7.5e-41 171.0 139 64.0
Sed0007068 Sechium edule HOM05D001092 ORTHO05D000923 9.8e-41 170.6 139 63.3
Sp7g17050 Schrenkiella parvula HOM05D001092 ORTHO05D000923 2.2e-40 169.5 143 60.1
A08p12900 Brassica napus HOM05D001092 ORTHO05D000923 2.9e-40 169.1 143 60.1
BraA08t33273Z Brassica rapa HOM05D001092 ORTHO05D000923 2.9e-40 169.1 143 60.1
HPP92_014925 Vanilla planifolia HOM05D001092 ORTHO05D000923 3.7e-40 168.7 136 63.2
HPP92_014930 Vanilla planifolia HOM05D001092 ORTHO05D000923 3.7e-40 168.7 136 63.2
Carub.0007s2427 Capsella rubella HOM05D001092 ORTHO05D000923 4.9e-40 168.3 143 59.4
Thhalv10024176m.g Eutrema salsugineum HOM05D001092 ORTHO05D000923 4.9e-40 168.3 143 58.7
ATR0829G162 Amborella trichopoda HOM05D001092 ORTHO05D000923 8.3e-40 167.5 139 64.0
BcaC07g38054 Brassica carinata HOM05D001092 ORTHO05D000923 2.4e-39 166.0 143 58.7
BolC8t48437H Brassica oleracea HOM05D001092 ORTHO05D000923 2.4e-39 166.0 143 58.7
Ah.12g053800 Amaranthus hybridus HOM05D001092 ORTHO05D000923 5.4e-39 164.9 137 58.4
AL7G37590 Arabidopsis lyrata HOM05D001092 ORTHO05D000923 2.0e-38 162.9 143 58.0
AT4G17140 Arabidopsis thaliana HOM05D001092 ORTHO05D000923 4.6e-38 161.8 143 58.0
AUR62018801 Chenopodium quinoa HOM05D001092 ORTHO05D000923 1.7e-37 159.8 139 58.3
CDE02G1948 Ceratophyllum demersum HOM05D001092 ORTHO05D000923 3.0e-37 159.1 137 59.1
AUR62007201 Chenopodium quinoa HOM05D001092 ORTHO05D000923 3.0e-37 159.1 139 58.3
Zm00001eb390790 Zea mays HOM05D001092 ORTHO05D000923 3.0e-37 159.1 136 56.6
EL10Ac5g12216 Beta vulgaris HOM05D001092 ORTHO05D000923 2.8e-35 152.5 137 54.7
SHI07558 Sapria himalayana HOM05D001092 ORTHO05D000923 3.7e-32 142.1 126 61.1
SEGI_38876 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 6.4e-32 141.4 137 51.1
AagrBONN_evm.TU.Sc2ySwM_362.876 Anthoceros agrestis HOM05D001092 ORTHO05D000923 8.6e-29 131.0 127 52.8
CARHR223710 Cardamine hirsuta HOM05D001092 ORTHO05D000923 3.7e-24 115.5 112 55.4
unitig_21.g20375 Utricularia gibba HOM05D001092 ORTHO05D000923 1.4e-23 113.6 106 52.8
Pp3c22_21110 Physcomitrium patens HOM05D001092 ORTHO05D000923 2.4e-23 112.8 126 42.9
Pp3c18_1370 Physcomitrium patens HOM05D001092 ORTHO05D000923 1.0e-21 107.5 126 42.1
Pp3c18_1376 Physcomitrium patens HOM05D001092 ORTHO05D000923 1.0e-21 107.5 126 42.1
Mapoly0105s0039 Marchantia polymorpha HOM05D001092 ORTHO05D000923 1.7e-21 106.7 126 42.9
Actinidia03403 Actinidia chinensis HOM05D001092 ORTHO05D000923 3.9e-21 105.5 55 92.7
Nn3g21823 Nelumbo nucifera HOM05D001092 ORTHO05D000923 4.0e-18 95.5 74 64.9
SMO356G0164 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 1.9e-15 86.7 99 44.4
SMO240G0003 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 2.2e-08 63.2 144 26.4
SMO240G0016 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 2.2e-08 63.2 144 26.4
SMO240G0049 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 2.2e-08 63.2 144 26.4
Nn2g14501 Nelumbo nucifera HOM05D001092 ORTHO05D000923 2.9e-08 62.8 147 27.9
SMO340G0042 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 2.9e-08 62.8 144 26.4
SMO240G0011 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 6.4e-08 61.6 144 25.7
PSO210G3521 Papaver somniferum HOM05D001092 ORTHO05D000923 1.6e-06 57.0 131 28.2
PSO761G0196 Papaver somniferum HOM05D001092 ORTHO05D000923 1.6e-06 57.0 131 28.2
ATR1145G023 Amborella trichopoda HOM05D001092 ORTHO05D000923 6.0e-06 55.1 152 24.3
ATR1145G101 Amborella trichopoda HOM05D001092 ORTHO05D000923 6.0e-06 55.1 152 24.3
Nitab4.5_0006135g0040 Nicotiana tabacum HOM05D001092 ORTHO05D000923 6.0e-06 55.1 35 65.7
SEGI_34503 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 6.0e-06 55.1 63 44.4


User provided reference genes

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