Gene: CiPaw.12G058400

General Information

Structural Information

Species Carya illinoinensis
Gene Identifier CiPaw.12G058400
Transcript Identifier CiPaw.12G058400.1
Gene Type Coding gene
Location Chr12 : 23123114-23155214 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001092
#Genes/#Species 562/99
Phylogenetic origin

ID ORTHO05D000923
#Genes/#Species 551/99
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id CiPaw.12G058400.v1.1
pacid 45805143

Descriptions

Short descriptions
Ortholog descriptions

Description PF00169//PF12624//PF16908//PF16910 - PH domain (PH) // N-terminal region of Chorein or VPS13 (Chorein_N) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Repeating coiled region of VPS13 (VPS13_mid_rpt)

Loading (ortholog descriptions from ath)...

Functional Annotation

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009506	ISO	PLAZA Integrative Orthology	plasmodesma	AT4G17140
GO:0005794	ISO	PLAZA Integrative Orthology	Golgi apparatus	AT4G17140
GO:0005773	ISO	PLAZA Integrative Orthology	vacuole	AT4G17140

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR031642	VPS13, repeated coiled region
IPR011993	PH-like domain superfamily
IPR026854	Vacuolar protein sorting-associated protein 13-like, N-terminal domain
IPR001849	Pleckstrin homology domain
IPR031646	Vacuolar protein sorting-associated protein 13, second N-terminal domain

Mapman id	Description
35.1	not assigned.annotated