Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031879 Camellia sinensis var. sinensis HOM05D004154 ORTHO05D004988 1.2e-69 266.5 146 100.0
CSS0019694 Camellia sinensis var. sinensis HOM05D004154 ORTHO05D004988 6.2e-47 191.0 170 70.6
CSS0026293 Camellia sinensis var. sinensis HOM05D004154 ORTHO05D004988 9.3e-43 177.2 163 69.3
CSS0023347 Camellia sinensis var. sinensis HOM05D004154 ORTHO05D004988 8.7e-41 170.6 148 73.0
CSS0027886 Camellia sinensis var. sinensis HOM05D004154 ORTHO05D004988 9.0e-38 160.6 169 63.3
Rhsim07G0083500 Rhododendron simsii HOM05D004154 ORTHO05D004988 3.8e-36 155.2 168 60.1
vmacro13908 Vaccinium macrocarpon HOM05D004154 ORTHO05D004988 1.9e-35 152.9 168 58.3
Potri.001G093700 Populus trichocarpa HOM05D004154 ORTHO05D004988 6.7e-33 144.4 159 57.2
SalBow1G2286 Salvia bowleyana HOM05D004154 ORTHO05D004988 8.8e-33 144.1 165 53.9
SalBow1G6205 Salvia bowleyana HOM05D004154 ORTHO05D004988 8.8e-33 144.1 165 53.9
Sabra01G0069600 Salix brachista HOM05D004154 ORTHO05D004988 1.1e-32 143.7 159 57.2
Cfa012835 Carpinus fangiana HOM05D004154 ORTHO05D004988 9.7e-32 140.6 166 54.8
Dinv38854 Davidia involucrata HOM05D000337 ORTHO05D000297 2.8e-31 139.0 164 56.1
Gorai.007G025500 Gossypium raimondii HOM05D004154 ORTHO05D004988 2.4e-30 136.0 164 52.4
Potri.003G138000 Populus trichocarpa HOM05D004154 ORTHO05D004988 4.1e-30 135.2 169 50.3
Glyma.05G215500 Glycine max HOM05D004154 ORTHO05D004988 1.2e-29 133.7 160 55.0
PSO135G0371 Papaver somniferum HOM05D004154 ORTHO05D004988 2.0e-29 132.9 171 48.5
Gohir.D11G023700 Gossypium hirsutum HOM05D004154 ORTHO05D004988 3.4e-29 132.1 164 52.4
Gohir.A11G024000 Gossypium hirsutum HOM05D004154 ORTHO05D004988 5.9e-29 131.3 165 52.1
Manes.02G012100 Manihot esculenta HOM05D004154 ORTHO05D004988 5.9e-29 131.3 163 50.9
Medtr8g099305 Medicago truncatula HOM05D004154 ORTHO05D004988 7.7e-29 131.0 171 48.0
Cc08_g15820 Coffea canephora HOM05D004154 ORTHO05D004988 1.7e-28 129.8 166 54.8
QL02p031322 Quercus lobata HOM05D004154 ORTHO05D004988 1.7e-28 129.8 164 52.4
CANSAT21G2399 Cannabis sativa HOM05D004154 ORTHO05D004988 2.2e-28 129.4 161 50.9
Nn3g19070 Nelumbo nucifera HOM05D004154 ORTHO05D004988 2.2e-28 129.4 163 55.2
Duzib068G1416 Durio zibethinus HOM05D004154 ORTHO05D004988 2.9e-28 129.0 165 51.5
MSTRG.25659 Avicennia marina HOM05D004154 ORTHO05D004988 3.8e-28 128.6 170 51.2
FAN08G1247 Fragaria x ananassa HOM05D004154 ORTHO05D004988 3.8e-28 128.6 161 50.9
arahy.Tifrunner.gnm1.ann1.Y783I6 Arachis hypogaea HOM05D004154 ORTHO05D004988 6.5e-28 127.9 164 52.4
CDE03G0409 Ceratophyllum demersum HOM05D004154 ORTHO05D004988 1.9e-27 126.3 166 45.8
PSO384G3063 Papaver somniferum HOM05D004154 ORTHO05D004988 1.9e-27 126.3 164 48.8
RcHm_v2.0_Chr7g0195371 Rosa chinensis HOM05D004154 ORTHO05D004988 1.9e-27 126.3 161 51.6
arahy.Tifrunner.gnm1.ann1.1D56YB Arachis hypogaea HOM05D004154 ORTHO05D004988 7.2e-27 124.4 164 51.8
Lj4g0021447 Lotus japonicus HOM05D004154 ORTHO05D004988 1.6e-26 123.2 166 48.2
CiPaw.11G123500 Carya illinoinensis HOM05D004154 ORTHO05D004988 3.6e-26 122.1 164 50.0
Phvul.002G296700 Phaseolus vulgaris HOM05D004154 ORTHO05D004988 3.6e-26 122.1 161 49.7
Prupe.5G115800 Prunus persica HOM05D004154 ORTHO05D004988 3.6e-26 122.1 162 49.4
Lalb_Chr05g0224221 Lupinus albus HOM05D004154 ORTHO05D004988 6.1e-26 121.3 165 49.7
VMungo0251G3674 Vigna mungo HOM05D004154 ORTHO05D004988 7.9e-26 120.9 167 47.3
AUR62019814 Chenopodium quinoa HOM05D004154 ORTHO05D004988 1.0e-25 120.6 142 52.1
Migut.A00676 Erythranthe guttata HOM05D004154 ORTHO05D004988 1.8e-25 119.8 165 49.1
Zm00001eb238060 Zea mays HOM05D004154 ORTHO05D004988 1.8e-25 119.8 157 49.7
Thecc.03G293700 Theobroma cacao HOM05D004154 ORTHO05D004988 3.0e-25 119.0 169 46.7
COL.COLO4_21713 Corchorus olitorius HOM05D004154 ORTHO05D004988 3.9e-25 118.6 169 48.5
Sopen08g030360 Solanum pennellii HOM05D004154 ORTHO05D004988 3.9e-25 118.6 169 46.7
DCAR_027717 Daucus carota HOM05D004154 ORTHO05D004988 5.1e-25 118.2 176 45.5
Haze_08653 Corylus avellana HOM05D004154 ORTHO05D004988 6.7e-25 117.9 163 49.1
TWI60G1238 Tripterygium wilfordii HOM05D004154 ORTHO05D004988 6.7e-25 117.9 159 50.3
Glyma.08G021700 Glycine max HOM05D004154 ORTHO05D004988 8.8e-25 117.5 163 48.5
Aqoxy7G00145 Aquilegia oxysepala HOM05D004154 ORTHO05D004988 1.1e-24 117.1 168 49.4
Oeu061093.1 Olea europaea HOM05D004154 ORTHO05D004988 1.1e-24 117.1 165 48.5
MBI07_g24338_MAGBIO Magnolia biondii HOM05D004154 ORTHO05D004988 1.5e-24 116.7 161 48.4
Ca_17492_v3 Cicer arietinum L. HOM05D004154 ORTHO05D004988 3.3e-24 115.5 173 44.5
Sed0017887 Sechium edule HOM05D004154 ORTHO05D004988 3.3e-24 115.5 162 46.9
Solyc08g082070.3 Solanum lycopersicum HOM05D004154 ORTHO05D004988 3.3e-24 115.5 168 46.4
SGA_v2.0_scaffold173G39085 Striga asiatica HOM05D004154 ORTHO05D004988 4.4e-24 115.2 159 48.4
CSS0017125 Camellia sinensis var. sinensis HOM05D004154 ORTHO05D004988 7.4e-24 114.4 90 78.9
Eucgr.E00847 Eucalyptus grandis HOM05D004154 ORTHO05D004988 9.7e-24 114.0 157 47.8
PGSC0003DMG400012298 Solanum tuberosum HOM05D004154 ORTHO05D004988 1.3e-23 113.6 169 46.7
Cpa.g.sc122.41 Carica papaya HOM05D004154 ORTHO05D004988 2.2e-23 112.8 163 47.2
unitig_32.g11609 Utricularia gibba HOM05D004154 ORTHO05D004988 2.8e-23 112.5 156 46.8
TPR.G3381 Trifolium pratense HOM05D004154 ORTHO05D004988 3.7e-23 112.1 174 43.7
CSS0011943 Camellia sinensis var. sinensis HOM05D004154 ORTHO05D004988 4.8e-23 111.7 89 76.4
HanXRQChr17g0535161 Helianthus annuus HOM05D004154 ORTHO05D004988 8.2e-23 110.9 165 50.3
Atru.chr9.2030 Acer truncatum HOM05D004154 ORTHO05D004988 1.8e-22 109.8 157 47.8
BraA01t01449Z Brassica rapa HOM05D004154 ORTHO05D004988 4.1e-22 108.6 158 45.6
Duzib183G0002 Durio zibethinus HOM05D004154 ORTHO05D004988 4.1e-22 108.6 82 70.7
MELO3C016306.2 Cucumis melo HOM05D004154 ORTHO05D004988 5.3e-22 108.2 162 44.4
THA.LOC104806434 Tarenaya hassleriana HOM05D004154 ORTHO05D004988 5.3e-22 108.2 159 48.4
BcaC09g50947 Brassica carinata HOM05D004154 ORTHO05D004988 7.0e-22 107.8 157 45.9
Nitab4.5_0010205g0030 Nicotiana tabacum HOM05D004154 ORTHO05D004988 7.0e-22 107.8 84 69.0
Sp7g21760 Schrenkiella parvula HOM05D004154 ORTHO05D004988 7.0e-22 107.8 155 47.1
Lj8A210T88 Lonicera japonica HOM05D004154 ORTHO05D004988 9.1e-22 107.5 142 50.0
A01p15110 Brassica napus HOM05D004154 ORTHO05D004988 1.2e-21 107.1 158 44.9
MD14G1121900 Malus domestica HOM05D004154 ORTHO05D004988 1.2e-21 107.1 144 47.9
BcaNung01086 Brassica carinata HOM05D004154 ORTHO05D004988 2.0e-21 106.3 158 45.6
AL7G29550 Arabidopsis lyrata HOM05D004154 ORTHO05D004988 2.6e-21 105.9 158 44.9
Carub.0007s1732 Capsella rubella HOM05D004154 ORTHO05D004988 2.6e-21 105.9 158 45.6
CARHR231190 Cardamine hirsuta HOM05D004154 ORTHO05D004988 2.6e-21 105.9 158 43.7
Ciclev10023918m.g Citrus clementina HOM05D004154 ORTHO05D004988 7.7e-21 104.4 77 74.0
CsaV3_4G006440 Cucumis sativus L. HOM05D004154 ORTHO05D004988 1.3e-20 103.6 173 42.2
Thhalv10025168m.g Eutrema salsugineum HOM05D004154 ORTHO05D004988 1.3e-20 103.6 157 44.6
AT4G23800 Arabidopsis thaliana HOM05D004154 ORTHO05D004988 2.2e-20 102.8 158 44.3
AUR62010814 Chenopodium quinoa HOM05D004154 ORTHO05D004988 2.9e-20 102.4 142 47.2
AL6G45220 Arabidopsis lyrata HOM05D004154 ORTHO05D004988 3.8e-20 102.1 159 44.7
ECA234G2690 Erigeron canadensis HOM05D004154 ORTHO05D004988 6.5e-20 101.3 173 47.4
MD06G1103000 Malus domestica HOM05D004154 ORTHO05D004988 1.4e-19 100.1 154 45.5
EL10Ac5g12892 Beta vulgaris HOM05D004154 ORTHO05D004988 1.9e-19 99.8 162 44.4
GSVIVG01019504001 Vitis vinifera HOM05D004154 ORTHO05D004988 1.9e-19 99.8 175 46.3
C01p19010 Brassica napus HOM05D004154 ORTHO05D004988 2.5e-19 99.4 159 43.4
BolC1t01827H Brassica oleracea HOM05D004154 ORTHO05D004988 2.5e-19 99.4 159 43.4
PGR042G2687 Punica granatum HOM05D004154 ORTHO05D004988 2.5e-19 99.4 165 44.8
Lsat_1_v5_gn_3_10260 Lactuca sativa HOM05D004154 ORTHO05D004988 4.2e-19 98.6 173 42.8
Hund11402 Selenicereus undatus HOM05D004154 ORTHO05D004988 5.5e-19 98.2 160 44.4
Peaxi162Scf00074g01143 Petunia axillaris HOM05D004154 ORTHO05D004988 7.2e-19 97.8 74 68.9
A09p28160 Brassica napus HOM05D004154 ORTHO05D004988 1.2e-18 97.1 160 43.8
BraA09t38379Z Brassica rapa HOM05D004154 ORTHO05D004988 1.2e-18 97.1 160 43.8
Sp6g06370 Schrenkiella parvula HOM05D004154 ORTHO05D004988 1.2e-18 97.1 158 44.3
FvH4_5g04120 Fragaria vesca HOM05D004154 ORTHO05D004988 3.6e-18 95.5 130 47.7
Thhalv10028648m.g Eutrema salsugineum HOM05D004154 ORTHO05D004988 4.7e-18 95.1 158 44.3
Carub.0006s2985 Capsella rubella HOM05D004154 ORTHO05D004988 1.4e-17 93.6 158 41.8
CARHR255520 Cardamine hirsuta HOM05D004154 ORTHO05D004988 1.4e-17 93.6 158 43.0
Aa31LG5G23780 Aethionema arabicum HOM05D004154 ORTHO05D004988 1.8e-17 93.2 156 43.6
AT4G11080 Arabidopsis thaliana HOM05D004154 ORTHO05D004988 3.9e-17 92.0 158 41.1
BcaC04g21100 Brassica carinata HOM05D004154 ORTHO05D004988 3.9e-17 92.0 160 42.5
C09p35690 Brassica napus HOM05D004154 ORTHO05D004988 3.9e-17 92.0 160 42.5
BolC9t56405H Brassica oleracea HOM05D004154 ORTHO05D004988 3.9e-17 92.0 160 42.5
Duzib205G2047 Durio zibethinus HOM05D004154 ORTHO05D004988 5.7e-16 88.2 128 45.3
Aa31LG6G7020 Aethionema arabicum HOM05D004154 ORTHO05D004988 2.2e-15 86.3 124 46.0
Psat7g026240 Pisum sativum HOM05D004154 ORTHO05D004988 2.2e-15 86.3 107 48.6
SEGI_25080 Sequoiadendron giganteum HOM05D004154 ORTHO05D004988 2.2e-15 86.3 94 48.9
ATR1100G049 Amborella trichopoda HOM05D004154 ORTHO05D004988 1.1e-14 84.0 165 38.2
PGSC0003DMG400012086 Solanum tuberosum HOM05D004154 ORTHO05D004988 4.1e-14 82.0 165 42.4
Pp3c11_8530 Physcomitrium patens HOM05D004154 ORTHO05D004988 9.1e-14 80.9 176 34.1
Sc07g0009970 Simmondsia chinensis HOM05D004154 ORTHO05D004988 3.5e-13 79.0 159 39.6
Os02g0258200 Oryza sativa ssp. japonica HOM05D004154 ORTHO05D004988 1.0e-12 77.4 162 38.3
SEGI_34551 Sequoiadendron giganteum HOM05D004154 ORTHO05D004988 5.0e-12 75.1 162 33.3
AagrBONN_evm.TU.Sc2ySwM_117.3685 Anthoceros agrestis HOM05D004154 ORTHO05D004988 3.6e-10 68.9 156 36.5
Nitab4.5_0000223g0250 Nicotiana tabacum HOM05D004154 ORTHO05D004988 6.1e-10 68.2 169 36.7
Pp3c7_20570 Physcomitrium patens HOM05D004154 ORTHO05D004988 1.8e-09 66.6 176 33.5
Manes.17G117281 Manihot esculenta HOM05D004154 ORTHO05D004988 3.1e-06 55.8 93 44.1
SMO367G1063 Selaginella moellendorffii HOM05D004154 ORTHO05D004988 3.1e-06 55.8 155 34.8
FAN18G0035 Fragaria x ananassa HOM05D004154 ORTHO05D004988 7.0e-06 54.7 100 41.0


User provided reference genes

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