Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031863 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 8.9e-136 486.9 237 100.0
CSS0045137 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 6.5e-86 321.2 251 68.1
CSS0017346 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 2.1e-60 236.5 189 69.3
CSS0049214 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 1.1e-56 224.2 184 67.9
CSS0048200 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 3.6e-52 209.1 157 72.6
Dinv37491 Davidia involucrata HOM05D006943 ORTHO05D008565 1.2e-23 114.4 158 48.1
Dinv38807 Davidia involucrata HOM05D006943 ORTHO05D008565 1.6e-23 114.0 158 48.7
Actinidia25739 Actinidia chinensis HOM05D006943 ORTHO05D008565 9.6e-21 104.8 151 46.4
QL12p025818 Quercus lobata HOM05D006943 ORTHO05D008565 1.4e-19 100.9 167 42.5
GSVIVG01035569001 Vitis vinifera HOM05D006943 ORTHO05D008565 1.2e-18 97.8 224 37.1
TAR636G0756 Trochodendron aralioides HOM05D006943 ORTHO05D008565 7.6e-18 95.1 149 44.3
EL10Ac2g03684 Beta vulgaris HOM05D006943 ORTHO05D008565 6.4e-17 92.0 142 41.5
Manes.16G137900 Manihot esculenta HOM05D006943 ORTHO05D008565 1.1e-16 91.3 148 42.6
CsaV3_3G047250 Cucumis sativus L. HOM05D006943 ORTHO05D008565 1.4e-16 90.9 160 41.2
Sed0013911 Sechium edule HOM05D006943 ORTHO05D008565 1.4e-16 90.9 159 42.1
Haze_21789 Corylus avellana HOM05D006943 ORTHO05D008565 2.4e-16 90.1 145 45.5
Hund03260 Selenicereus undatus HOM05D006943 ORTHO05D008565 2.4e-16 90.1 145 37.9
TWI63G1698 Tripterygium wilfordii HOM05D006943 ORTHO05D008565 3.2e-16 89.7 140 41.4
Duzib168G0749 Durio zibethinus HOM05D006943 ORTHO05D008565 4.2e-16 89.4 152 40.8
MELO3C003604.2 Cucumis melo HOM05D006943 ORTHO05D008565 5.4e-16 89.0 160 40.6
Potri.018G002801 Populus trichocarpa HOM05D006943 ORTHO05D008565 7.1e-16 88.6 110 47.3
ClCG05G026350 Citrullus lanatus HOM05D006943 ORTHO05D008565 1.6e-15 87.4 158 39.9
Potri.006G279100 Populus trichocarpa HOM05D006943 ORTHO05D008565 2.7e-15 86.7 96 47.9
Ah.11g044140 Amaranthus hybridus HOM05D006943 ORTHO05D008565 1.3e-14 84.3 111 41.4
Cpa.g.sc148.5 Carica papaya HOM05D006943 ORTHO05D008565 1.7e-14 84.0 150 39.3
FvH4_2g36510 Fragaria vesca HOM05D006943 ORTHO05D008565 5.1e-14 82.4 172 36.6
FAN20G3130 Fragaria x ananassa HOM05D006943 ORTHO05D008565 5.1e-14 82.4 153 39.2
AUR62020649 Chenopodium quinoa HOM05D006943 ORTHO05D008565 6.6e-14 82.0 122 39.3
FAN27G2029 Fragaria x ananassa HOM05D006943 ORTHO05D008565 6.6e-14 82.0 171 37.4
AUR62038724 Chenopodium quinoa HOM05D006943 ORTHO05D008565 8.7e-14 81.6 122 39.3
AUR62043827 Chenopodium quinoa HOM05D006943 ORTHO05D008565 8.7e-14 81.6 122 39.3
FAN15G2754 Fragaria x ananassa HOM05D006943 ORTHO05D008565 8.7e-14 81.6 154 37.7
Eucgr.C02135 Eucalyptus grandis HOM05D006943 ORTHO05D008565 1.1e-13 81.3 143 40.6
Eucgr.L02411 Eucalyptus grandis HOM05D006943 ORTHO05D008565 1.1e-13 81.3 143 40.6
Sc06g0001270 Simmondsia chinensis HOM05D006943 ORTHO05D008565 2.5e-13 80.1 159 40.3
Cfa013306 Carpinus fangiana HOM05D006943 ORTHO05D008565 3.3e-13 79.7 116 45.7
RcHm_v2.0_Chr6g0305361 Rosa chinensis HOM05D006943 ORTHO05D008565 5.6e-13 79.0 149 36.9
Prupe.1G456500 Prunus persica HOM05D006943 ORTHO05D008565 9.6e-13 78.2 127 40.9
BcaC01g01105 Brassica carinata HOM05D006943 ORTHO05D008565 1.3e-12 77.8 142 39.4
C03p88130 Brassica napus HOM05D006943 ORTHO05D008565 1.3e-12 77.8 142 39.4
BolC3t21121H Brassica oleracea HOM05D006943 ORTHO05D008565 1.3e-12 77.8 142 39.4
A08p18750 Brassica napus HOM05D006943 ORTHO05D008565 4.8e-12 75.9 142 39.4
PGSC0003DMG400029553 Solanum tuberosum HOM05D006943 ORTHO05D008565 4.8e-12 75.9 141 38.3
Thhalv10025787m.g Eutrema salsugineum HOM05D006943 ORTHO05D008565 6.2e-12 75.5 136 41.2
Nn5g27072 Nelumbo nucifera HOM05D006943 ORTHO05D008565 6.2e-12 75.5 149 38.3
BcaB03g12686 Brassica carinata HOM05D006943 ORTHO05D008565 1.4e-11 74.3 142 38.7
BraA08t33836Z Brassica rapa HOM05D006943 ORTHO05D008565 1.4e-11 74.3 142 38.7
Nitab4.5_0001942g0070 Nicotiana tabacum HOM05D006943 ORTHO05D008565 1.8e-11 73.9 143 35.0
Solyc08g069160.3 Solanum lycopersicum HOM05D006943 ORTHO05D008565 1.8e-11 73.9 141 37.6
Sopen08g022790 Solanum pennellii HOM05D006943 ORTHO05D008565 1.8e-11 73.9 141 37.6
Aa31LG2G19090 Aethionema arabicum HOM05D006943 ORTHO05D008565 3.1e-11 73.2 117 40.2
CANSAT35G2034 Cannabis sativa HOM05D006943 ORTHO05D008565 3.1e-11 73.2 152 39.5
AT4G31270 Arabidopsis thaliana HOM05D006943 ORTHO05D008565 4.0e-11 72.8 145 37.2
CAN.G480.10 Capsicum annuum HOM05D006943 ORTHO05D008565 4.0e-11 72.8 117 37.6
AL7G20800 Arabidopsis lyrata HOM05D006943 ORTHO05D008565 9.0e-11 71.6 145 36.6
MD15G1104200 Malus domestica HOM05D006943 ORTHO05D008565 1.5e-10 70.9 104 39.4
THA.LOC104803585 Tarenaya hassleriana HOM05D006943 ORTHO05D008565 2.6e-10 70.1 148 37.2
MD08G1124900 Malus domestica HOM05D006943 ORTHO05D008565 3.4e-10 69.7 104 40.4
Sp7g29130 Schrenkiella parvula HOM05D006943 ORTHO05D008565 5.8e-10 68.9 138 37.0
MBI16_g00837_MAGBIO Magnolia biondii HOM05D006943 ORTHO05D008565 1.7e-09 67.4 139 36.0
Carub.0007s0929 Capsella rubella HOM05D006943 ORTHO05D008565 2.2e-09 67.0 137 37.2
Cc10_g14290 Coffea canephora HOM05D006943 ORTHO05D008565 4.9e-09 65.9 146 33.6
CARHR239150 Cardamine hirsuta HOM05D006943 ORTHO05D008565 3.2e-08 63.2 135 38.5
Nitab4.5_0005058g0010 Nicotiana tabacum HOM05D006943 ORTHO05D008565 7.1e-08 62.0 113 33.6
Peaxi162Scf00213g00939 Petunia axillaris HOM05D006943 ORTHO05D008565 9.3e-08 61.6 142 33.1
PSO063G4511 Papaver somniferum HOM05D006943 ORTHO05D008565 2.7e-07 60.1 134 34.3
DCAR_004562 Daucus carota HOM05D006943 ORTHO05D008565 3.5e-07 59.7 161 32.9
Lsat_1_v5_gn_3_68681 Lactuca sativa HOM05D006943 ORTHO05D008565 3.5e-07 59.7 115 36.5
PSO170G5679 Papaver somniferum HOM05D006943 ORTHO05D008565 4.6e-07 59.3 134 33.6
ECA246G0365 Erigeron canadensis HOM05D006943 ORTHO05D008565 1.3e-06 57.8 99 41.4
Atru.chr7.2692 Acer truncatum HOM05D006943 ORTHO05D008565 1.7e-06 57.4 102 39.2
COL.COLO4_18631 Corchorus olitorius HOM05D006943 ORTHO05D008565 2.3e-06 57.0 151 33.8
Lalb_Chr22g0361191 Lupinus albus HOM05D006943 ORTHO05D008565 2.3e-06 57.0 131 32.1


User provided reference genes

Program Settings