Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030902 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 5.7e-152 540.8 259 100.0
Aqoxy2G01714 Aquilegia oxysepala HOM05D004644 ORTHO05D005700 1.7e-84 316.6 256 57.8
QL08p054123 Quercus lobata HOM05D004644 ORTHO05D005700 1.5e-83 313.5 258 61.2
TAR633G1934 Trochodendron aralioides HOM05D004644 ORTHO05D005700 2.5e-83 312.8 260 59.2
Manes.07G133120 Manihot esculenta HOM05D004644 ORTHO05D005700 6.4e-79 298.1 262 56.9
Prupe.2G207900 Prunus persica HOM05D004644 ORTHO05D005700 5.4e-78 295.0 257 54.9
Potri.010G228000 Populus trichocarpa HOM05D004644 ORTHO05D005700 4.6e-77 292.0 262 55.0
GSVIVG01033660001 Vitis vinifera HOM05D004644 ORTHO05D005700 1.1e-75 287.3 259 55.2
Dinv35798 Davidia involucrata HOM05D004644 ORTHO05D005700 1.9e-75 286.6 269 53.9
Cfa017634 Carpinus fangiana HOM05D004644 ORTHO05D005700 5.6e-75 285.0 255 56.1
CSS0046520 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 2.0e-72 276.6 260 53.8
MD01G1102300 Malus domestica HOM05D004644 ORTHO05D005700 4.5e-72 275.4 259 53.3
PSO801G0701 Papaver somniferum HOM05D004644 ORTHO05D005700 7.6e-72 274.6 254 53.1
PSO339G1979 Papaver somniferum HOM05D004644 ORTHO05D005700 1.1e-70 270.8 254 53.5
Potri.006G122800 Populus trichocarpa HOM05D004644 ORTHO05D005700 5.5e-70 268.5 258 52.7
QL07p043006 Quercus lobata HOM05D004644 ORTHO05D005700 6.0e-69 265.0 257 52.1
Actinidia28913 Actinidia chinensis HOM05D004644 ORTHO05D005700 1.0e-68 264.2 257 51.8
Duzib093G1101 Durio zibethinus HOM05D004644 ORTHO05D005700 1.0e-68 264.2 250 49.2
Sabra06G0097000 Salix brachista HOM05D004644 ORTHO05D005700 5.1e-68 261.9 255 52.2
TWI53G0078 Tripterygium wilfordii HOM05D004644 ORTHO05D005700 8.7e-68 261.2 254 53.5
Rhsim03G0090100 Rhododendron simsii HOM05D004644 ORTHO05D005700 1.1e-67 260.8 263 52.9
MBI18_g00904_MAGBIO Magnolia biondii HOM05D004644 ORTHO05D005700 1.9e-67 260.0 277 48.0
CSS0001913 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 1.3e-66 257.3 118 99.2
COL.COLO4_26937 Corchorus olitorius HOM05D004644 ORTHO05D005700 1.1e-65 254.2 251 47.8
CiPaw.09G171100 Carya illinoinensis HOM05D004644 ORTHO05D005700 2.6e-64 249.6 245 53.9
Migut.J00643 Erythranthe guttata HOM05D004644 ORTHO05D005700 2.9e-63 246.1 253 49.8
Oeu045234.3 Olea europaea HOM05D004644 ORTHO05D005700 2.9e-63 246.1 260 48.5
Eucgr.A01659 Eucalyptus grandis HOM05D004644 ORTHO05D005700 4.9e-63 245.4 256 48.4
MD12G1109200 Malus domestica HOM05D004644 ORTHO05D005700 4.9e-63 245.4 260 48.8
Cpa.g.sc102.18 Carica papaya HOM05D004644 ORTHO05D005700 1.4e-62 243.8 259 49.4
MSTRG.5768 Avicennia marina HOM05D004644 ORTHO05D005700 3.2e-62 242.7 254 50.0
vmacro07303 Vaccinium macrocarpon HOM05D004644 ORTHO05D005700 3.2e-62 242.7 263 49.8
Gorai.006G162300 Gossypium raimondii HOM05D004644 ORTHO05D005700 9.3e-62 241.1 251 47.4
RcHm_v2.0_Chr3g0470481 Rosa chinensis HOM05D004644 ORTHO05D005700 2.1e-61 240.0 255 46.7
Atru.chr8.1780 Acer truncatum HOM05D004644 ORTHO05D005700 2.7e-61 239.6 258 46.5
Gohir.D09G141400 Gossypium hirsutum HOM05D004644 ORTHO05D005700 3.5e-61 239.2 251 47.4
Prupe.7G127800 Prunus persica HOM05D004644 ORTHO05D005700 3.5e-61 239.2 261 46.7
DCAR_009308 Daucus carota HOM05D004644 ORTHO05D005700 7.9e-61 238.0 258 46.5
Gohir.A09G145300 Gossypium hirsutum HOM05D004644 ORTHO05D005700 3.0e-60 236.1 251 47.4
CsaV3_6G039930 Cucumis sativus L. HOM05D004644 ORTHO05D005700 3.9e-60 235.7 258 46.1
Sc02g0001570 Simmondsia chinensis HOM05D004644 ORTHO05D005700 6.7e-60 235.0 257 47.1
Sopen09g003150 Solanum pennellii HOM05D004644 ORTHO05D005700 1.5e-59 233.8 256 48.0
EL10Ac7g16657 Beta vulgaris HOM05D004644 ORTHO05D005700 3.3e-59 232.6 261 47.9
Lj2C119G5 Lonicera japonica HOM05D004644 ORTHO05D005700 3.3e-59 232.6 255 46.7
MELO3C024470.2 Cucumis melo HOM05D004644 ORTHO05D005700 7.4e-59 231.5 258 45.7
Sed0011501 Sechium edule HOM05D004644 ORTHO05D005700 7.4e-59 231.5 260 46.9
FAN09G2255 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.6e-58 230.3 259 47.1
PGSC0003DMG401003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 2.2e-58 229.9 256 47.7
FvH4_6g16560 Fragaria vesca HOM05D004644 ORTHO05D005700 4.8e-58 228.8 258 46.5
FAN05G3668 Fragaria x ananassa HOM05D004644 ORTHO05D005700 6.3e-58 228.4 259 46.7
FAN05G5479 Fragaria x ananassa HOM05D004644 ORTHO05D005700 6.3e-58 228.4 259 46.7
TPR.G32811 Trifolium pratense HOM05D004644 ORTHO05D005700 1.4e-57 227.3 249 47.4
Phvul.001G180000 Phaseolus vulgaris HOM05D004644 ORTHO05D005700 9.0e-57 224.6 254 46.9
FAN02G4433 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.2e-56 224.2 257 46.3
Nitab4.5_0000578g0020 Nicotiana tabacum HOM05D004644 ORTHO05D005700 2.9e-55 219.5 249 46.6
AUR62042062 Chenopodium quinoa HOM05D004644 ORTHO05D005700 3.8e-55 219.2 257 46.7
ClCG04G009350 Citrullus lanatus HOM05D004644 ORTHO05D005700 3.8e-55 219.2 262 43.9
AUR62026918 Chenopodium quinoa HOM05D004644 ORTHO05D005700 1.4e-54 217.2 257 45.9
Ca_08912_v3 Cicer arietinum L. HOM05D004644 ORTHO05D005700 4.2e-54 215.7 251 44.6
Glyma.03G184600 Glycine max HOM05D004644 ORTHO05D005700 4.2e-54 215.7 253 45.5
VMungo1383G2434 Vigna mungo HOM05D004644 ORTHO05D005700 1.6e-53 213.8 254 45.3
arahy.Tifrunner.gnm1.ann1.W70S5M Arachis hypogaea HOM05D004644 ORTHO05D005700 2.1e-53 213.4 256 46.9
Cc06_g04370 Coffea canephora HOM05D004644 ORTHO05D005700 3.6e-53 212.6 257 44.4
THA.LOC104816355 Tarenaya hassleriana HOM05D004644 ORTHO05D005700 1.0e-52 211.1 263 42.6
ATR0763G089 Amborella trichopoda HOM05D004644 ORTHO05D005700 1.4e-52 210.7 256 44.1
ECA238G2777 Erigeron canadensis HOM05D004644 ORTHO05D005700 1.8e-52 210.3 254 44.5
Lalb_Chr20g0112551 Lupinus albus HOM05D004644 ORTHO05D005700 1.8e-52 210.3 254 46.9
PGR004G1497 Punica granatum HOM05D004644 ORTHO05D005700 6.7e-52 208.4 218 51.8
Sp6g39290 Schrenkiella parvula HOM05D004644 ORTHO05D005700 8.8e-52 208.0 257 44.4
Lj1g0025951 Lotus japonicus HOM05D004644 ORTHO05D005700 1.5e-51 207.2 258 45.0
Medtr7g102280 Medicago truncatula HOM05D004644 ORTHO05D005700 1.5e-51 207.2 249 44.6
Psat3g041720 Pisum sativum HOM05D004644 ORTHO05D005700 9.7e-51 204.5 255 44.3
Aa31LG1G21710 Aethionema arabicum HOM05D004644 ORTHO05D005700 1.3e-50 204.1 257 43.6
Solyc09g008330.3 Solanum lycopersicum HOM05D004644 ORTHO05D005700 1.3e-50 204.1 232 46.6
Actinidia26658 Actinidia chinensis HOM05D004644 ORTHO05D005700 1.7e-50 203.8 238 45.0
Carub.0006s0226 Capsella rubella HOM05D004644 ORTHO05D005700 1.1e-49 201.1 259 45.6
AL6G12810 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 1.8e-49 200.3 258 41.9
FAN14G1031 Fragaria x ananassa HOM05D004644 ORTHO05D005700 9.1e-49 198.0 233 45.5
CARHR209890 Cardamine hirsuta HOM05D004644 ORTHO05D005700 2.0e-48 196.8 258 43.4
SGA_v2.0_scaffold40G15487 Striga asiatica HOM05D004644 ORTHO05D005700 2.6e-48 196.4 257 42.8
BcaB05g21841 Brassica carinata HOM05D004644 ORTHO05D005700 3.4e-48 196.1 256 42.6
BraA02t04761Z Brassica rapa HOM05D004644 ORTHO05D005700 4.5e-48 195.7 254 42.5
AT5G03450 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 5.9e-48 195.3 258 41.5
Os10g0545600 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 1.0e-47 194.5 268 40.7
BolC2t06098H Brassica oleracea HOM05D004644 ORTHO05D005700 2.2e-47 193.4 254 42.5
Zm00001eb393970 Zea mays HOM05D004644 ORTHO05D005700 1.1e-46 191.0 261 41.0
Zm00001eb393990 Zea mays HOM05D004644 ORTHO05D005700 3.2e-46 189.5 258 41.1
HanXRQChr14g0432961 Helianthus annuus HOM05D004644 ORTHO05D005700 4.2e-46 189.1 255 43.1
C02p01080 Brassica napus HOM05D004644 ORTHO05D005700 1.2e-45 187.6 254 41.7
Lj1g0007058 Lotus japonicus HOM05D004644 ORTHO05D005700 5.1e-44 182.2 272 40.8
CARHR209550 Cardamine hirsuta HOM05D004644 ORTHO05D005700 1.1e-43 181.0 252 39.7
SGA_v2.0_scaffold75G24833 Striga asiatica HOM05D004644 ORTHO05D005700 2.6e-43 179.9 257 40.1
Lsat_1_v5_gn_2_30721 Lactuca sativa HOM05D004644 ORTHO05D005700 1.0e-39 167.9 231 40.3
Nitab4.5_0004476g0040 Nicotiana tabacum HOM05D004644 ORTHO05D005700 1.2e-37 161.0 201 45.8
Haze_20519 Corylus avellana HOM05D004644 ORTHO05D005700 4.7e-37 159.1 153 52.9
AL6G13290 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 6.1e-37 158.7 257 37.0
Zm00001eb000650 Zea mays HOM05D004644 ORTHO05D005700 8.0e-37 158.3 265 36.2
Peaxi162Scf00722g00210 Petunia axillaris HOM05D004644 ORTHO05D005700 1.8e-36 157.1 202 45.0
Thhalv10013047m.g Eutrema salsugineum HOM05D004644 ORTHO05D005700 1.1e-35 154.5 230 42.2
unitig_8.g4114 Utricularia gibba HOM05D004644 ORTHO05D005700 2.4e-33 146.7 219 37.9
Mapoly0033s0098 Marchantia polymorpha HOM05D004644 ORTHO05D005700 1.0e-31 141.4 297 33.7
Pp3c22_3930 Physcomitrium patens HOM05D004644 ORTHO05D005700 1.5e-30 137.5 292 33.2
Nn2g13824 Nelumbo nucifera HOM05D004644 ORTHO05D005700 9.4e-30 134.8 144 49.3
Haze_20518 Corylus avellana HOM05D004644 ORTHO05D005700 4.4e-27 125.9 95 61.1
Manes.09G065000 Manihot esculenta HOM05D004644 ORTHO05D005700 1.3e-23 114.4 98 55.1
PGR004G0361 Punica granatum HOM05D004644 ORTHO05D005700 1.2e-21 107.8 117 50.4
PGR004G0952 Punica granatum HOM05D004644 ORTHO05D005700 1.0e-20 104.8 83 62.7
Glyma.19G185000 Glycine max HOM05D004644 ORTHO05D005700 1.4e-20 104.4 92 51.1
Thecc.05G069300 Theobroma cacao HOM05D004644 ORTHO05D005700 3.0e-20 103.2 87 55.2
CBR_g31861 Chara braunii HOM05D004644 ORTHO05D005700 5.2e-20 102.4 178 32.6
CDE02G0420 Ceratophyllum demersum HOM05D004644 ORTHO05D005700 2.0e-19 100.5 99 48.5
SEGI_17091 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.6e-11 73.6 205 25.9
AT5G03750 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 4.5e-08 62.8 50 54.0


User provided reference genes

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