Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028094 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 1.3e-64 249.6 129 100.0
Dinv27220 Davidia involucrata HOM05D004786 ORTHO05D005582 8.2e-59 230.3 129 91.5
Rhsim01G0289800 Rhododendron simsii HOM05D004786 ORTHO05D005582 1.1e-58 229.9 129 89.9
CSS0001467 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 4.1e-58 228.0 129 90.7
CSS0006628 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 4.1e-58 228.0 129 90.7
Oeu047382.1 Olea europaea HOM05D004786 ORTHO05D005582 9.1e-58 226.9 129 88.4
vmacro02412 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 2.6e-57 225.3 129 89.9
Nitab4.5_0002158g0250 Nicotiana tabacum HOM05D004786 ORTHO05D005582 4.5e-57 224.6 129 88.4
Nitab4.5_0007940g0040 Nicotiana tabacum HOM05D004786 ORTHO05D005582 4.5e-57 224.6 129 88.4
vmacro15120 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 4.5e-57 224.6 129 89.1
CAN.G1164.25 Capsicum annuum HOM05D004786 ORTHO05D005582 1.0e-56 223.4 125 90.4
Cc06_g14210 Coffea canephora HOM05D004786 ORTHO05D005582 1.0e-56 223.4 129 88.4
Peaxi162Scf00736g00421 Petunia axillaris HOM05D004786 ORTHO05D005582 1.7e-56 222.6 129 87.6
Migut.D00095 Erythranthe guttata HOM05D004786 ORTHO05D005582 2.2e-56 222.2 129 86.0
Hma1.2p1_0089F.1_g045460 Hydrangea macrophylla HOM05D004786 ORTHO05D005582 2.2e-56 222.2 129 89.9
Actinidia21008 Actinidia chinensis HOM05D004395 ORTHO05D005234 6.5e-56 220.7 131 87.0
Solyc02g078300.3 Solanum lycopersicum HOM05D004786 ORTHO05D005582 6.5e-56 220.7 126 88.1
Sopen02g023150 Solanum pennellii HOM05D004786 ORTHO05D005582 6.5e-56 220.7 126 88.1
PGSC0003DMG400029688 Solanum tuberosum HOM05D004786 ORTHO05D005582 6.5e-56 220.7 126 88.1
Rhsim13G0006100 Rhododendron simsii HOM05D004786 ORTHO05D005582 1.9e-55 219.2 129 89.1
Gohir.D10G086000 Gossypium hirsutum HOM05D004786 ORTHO05D005582 2.5e-55 218.8 129 85.3
Manes.02G090900 Manihot esculenta HOM05D004786 ORTHO05D005582 2.5e-55 218.8 129 84.5
HanXRQChr01g0000811 Helianthus annuus HOM05D004786 ORTHO05D005582 4.2e-55 218.0 128 86.7
Gorai.011G094200 Gossypium raimondii HOM05D004786 ORTHO05D005582 7.2e-55 217.2 129 84.5
MSTRG.21673 Avicennia marina HOM05D004786 ORTHO05D005582 9.4e-55 216.9 130 86.2
Nn4g25644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 3.6e-54 214.9 131 83.2
Solyc02g078285.1 Solanum lycopersicum HOM05D004786 ORTHO05D005582 3.6e-54 214.9 126 86.5
TAR636G2395 Trochodendron aralioides HOM05D004786 ORTHO05D005582 3.6e-54 214.9 129 82.9
GSVIVG01028095001 Vitis vinifera HOM05D004786 ORTHO05D005582 4.7e-54 214.5 147 77.6
TWI18G0747 Tripterygium wilfordii HOM05D004786 ORTHO05D005582 7.9e-54 213.8 129 82.2
COL.COLO4_29184 Corchorus olitorius HOM05D004786 ORTHO05D005582 1.4e-53 213.0 129 82.9
Actinidia21415 Actinidia chinensis HOM05D004786 ORTHO05D005582 1.8e-53 212.6 133 85.0
Haze_05017 Corylus avellana HOM05D004786 ORTHO05D005582 3.9e-53 211.5 124 83.1
Potri.014G122500 Populus trichocarpa HOM05D004786 ORTHO05D005582 5.2e-53 211.1 130 83.8
Gorai.001G266700 Gossypium raimondii HOM05D004786 ORTHO05D005582 8.8e-53 210.3 129 81.4
Duzib147G1635 Durio zibethinus HOM05D004786 ORTHO05D005582 1.5e-52 209.5 129 81.4
Ciclev10002837m.g Citrus clementina HOM05D004786 ORTHO05D005582 2.0e-52 209.1 130 83.1
Atru.chr5.1041 Acer truncatum HOM05D004786 ORTHO05D005582 2.6e-52 208.8 130 83.1
DCAR_002518 Daucus carota HOM05D004786 ORTHO05D005582 2.6e-52 208.8 129 81.4
CiPaw.08G091100 Carya illinoinensis HOM05D004786 ORTHO05D005582 3.3e-52 208.4 124 82.3
Ciclev10022845m.g Citrus clementina HOM05D004786 ORTHO05D005582 3.3e-52 208.4 130 82.3
Thecc.04G020200 Theobroma cacao HOM05D004786 ORTHO05D005582 3.3e-52 208.4 129 81.4
QL02p082487 Quercus lobata HOM05D004786 ORTHO05D005582 4.4e-52 208.0 124 81.5
QL12p029078 Quercus lobata HOM05D004786 ORTHO05D005582 5.7e-52 207.6 124 82.3
Sabra14G0090900 Salix brachista HOM05D004786 ORTHO05D005582 2.2e-51 205.7 130 82.3
SGA_v2.0_scaffold376G50268 Striga asiatica HOM05D004786 ORTHO05D005582 2.8e-51 205.3 136 77.2
Nn3g21644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 3.7e-51 204.9 129 79.1
Prupe.2G036200 Prunus persica HOM05D004786 ORTHO05D005582 6.3e-51 204.1 124 80.6
Ah.11g049360 Amaranthus hybridus HOM05D004786 ORTHO05D005582 1.8e-50 202.6 130 80.0
ECA248G3582 Erigeron canadensis HOM05D004786 ORTHO05D005582 1.8e-50 202.6 125 84.0
Aqoxy5G00800 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 2.4e-50 202.2 126 81.0
Cpa.g.sc18.18 Carica papaya HOM05D004786 ORTHO05D005582 4.1e-50 201.4 130 80.0
Glyma.10G001200 Glycine max HOM05D004786 ORTHO05D005582 7.0e-50 200.7 127 78.7
Gohir.A10G101800 Gossypium hirsutum HOM05D004786 ORTHO05D005582 1.2e-49 199.9 129 79.8
Glyma.10G014500 Glycine max HOM05D004786 ORTHO05D005582 2.0e-49 199.1 127 78.0
Lj5g0024614 Lotus japonicus HOM05D004786 ORTHO05D005582 2.0e-49 199.1 124 79.0
arahy.Tifrunner.gnm1.ann1.QQF2XI Arachis hypogaea HOM05D004786 ORTHO05D005582 2.6e-49 198.7 127 77.2
RcHm_v2.0_Chr4g0410491 Rosa chinensis HOM05D004786 ORTHO05D005582 2.6e-49 198.7 126 79.4
CsaV3_7G029840 Cucumis sativus L. HOM05D004786 ORTHO05D005582 3.5e-49 198.4 124 78.2
PSO478G0620 Papaver somniferum HOM05D004786 ORTHO05D005582 3.5e-49 198.4 131 77.1
Phvul.007G215700 Phaseolus vulgaris HOM05D004786 ORTHO05D005582 3.5e-49 198.4 127 77.2
Ca_01909_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 4.5e-49 198.0 127 76.4
FAN13G1587 Fragaria x ananassa HOM05D004786 ORTHO05D005582 4.5e-49 198.0 126 78.6
unitig_736.g22945 Utricularia gibba HOM05D004786 ORTHO05D005582 7.7e-49 197.2 140 75.7
PSO017G1185 Papaver somniferum HOM05D004786 ORTHO05D005582 1.3e-48 196.4 131 76.3
PGR142G0252 Punica granatum HOM05D004786 ORTHO05D005582 1.3e-48 196.4 123 78.0
EL10As5g23505 Beta vulgaris HOM05D004786 ORTHO05D005582 2.9e-48 195.3 130 76.9
MELO3C015937.2 Cucumis melo HOM05D004786 ORTHO05D005582 2.9e-48 195.3 124 77.4
FvH4_5g39500 Fragaria vesca HOM05D004786 ORTHO05D005582 2.9e-48 195.3 126 78.6
FAN18G2645 Fragaria x ananassa HOM05D004786 ORTHO05D005582 2.9e-48 195.3 126 78.6
THA.LOC104801297 Tarenaya hassleriana HOM05D004786 ORTHO05D005582 3.8e-48 194.9 130 77.7
RcHm_v2.0_Chr7g0241821 Rosa chinensis HOM05D004786 ORTHO05D005582 5.0e-48 194.5 126 77.8
CDE02G4247 Ceratophyllum demersum HOM05D004786 ORTHO05D005582 8.5e-48 193.7 129 78.3
SalBow3G4092 Salvia bowleyana HOM05D004786 ORTHO05D005582 8.5e-48 193.7 129 81.4
SEGI_16103 Sequoiadendron giganteum HOM05D004786 ORTHO05D005582 8.5e-48 193.7 126 75.4
arahy.Tifrunner.gnm1.ann1.BSR60Q Arachis hypogaea HOM05D004786 ORTHO05D005582 1.1e-47 193.4 127 74.8
Ca_10295_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 1.1e-47 193.4 127 74.8
Oeu005869.1 Olea europaea HOM05D004786 ORTHO05D005582 1.1e-47 193.4 122 77.9
CANSAT01G0603 Cannabis sativa HOM05D004786 ORTHO05D005582 1.5e-47 193.0 122 77.9
PSO478G2484 Papaver somniferum HOM05D004786 ORTHO05D005582 2.5e-47 192.2 131 75.6
Eucgr.C00116 Eucalyptus grandis HOM05D004786 ORTHO05D005582 4.2e-47 191.4 126 78.6
arahy.Tifrunner.gnm1.ann1.7GX23T Arachis hypogaea HOM05D004786 ORTHO05D005582 9.4e-47 190.3 127 73.2
Lalb_Chr11g0063261 Lupinus albus HOM05D004786 ORTHO05D005582 1.6e-46 189.5 127 75.6
TPR.G19757 Trifolium pratense HOM05D004786 ORTHO05D005582 2.1e-46 189.1 124 74.2
Atru.chr5.1040 Acer truncatum HOM05D004786 ORTHO05D005582 2.7e-46 188.7 130 74.6
Hund02934 Selenicereus undatus HOM05D004786 ORTHO05D005582 3.6e-46 188.3 167 62.9
Atru.chr2.1244 Acer truncatum HOM05D004786 ORTHO05D005582 6.1e-46 187.6 130 73.8
ClCG09G005230 Citrullus lanatus HOM05D004786 ORTHO05D005582 1.4e-45 186.4 131 72.5
arahy.Tifrunner.gnm1.ann1.U8589F Arachis hypogaea HOM05D004786 ORTHO05D005582 1.8e-45 186.0 127 71.7
Atru.chr2.1242 Acer truncatum HOM05D004786 ORTHO05D005582 2.3e-45 185.7 130 73.8
Sed0001914 Sechium edule HOM05D004786 ORTHO05D005582 3.0e-45 185.3 124 72.6
AUR62024675 Chenopodium quinoa HOM05D004786 ORTHO05D005582 8.8e-45 183.7 126 72.2
Sc05g0000530 Simmondsia chinensis HOM05D004786 ORTHO05D005582 8.8e-45 183.7 132 74.2
Zm00001eb131310 Zea mays HOM05D004786 ORTHO05D005582 1.2e-44 183.3 107 85.0
PSO339G0583 Papaver somniferum HOM05D004786 ORTHO05D005582 4.4e-44 181.4 132 69.7
PSO384G2419 Papaver somniferum HOM05D004786 ORTHO05D005582 4.4e-44 181.4 132 69.7
CANSAT01G2201 Cannabis sativa HOM05D004786 ORTHO05D005582 7.5e-44 180.6 122 73.8
Os01g0338100 Oryza sativa ssp. japonica HOM05D004786 ORTHO05D005582 9.7e-44 180.3 107 83.2
Aqoxy2G02794 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 1.7e-43 179.5 121 73.6
FAN14G2614 Fragaria x ananassa HOM05D004786 ORTHO05D005582 2.8e-43 178.7 105 81.0
Thhalv10009111m.g Eutrema salsugineum HOM05D004786 ORTHO05D005582 7.0e-42 174.1 127 69.3
Aqoxy293s004 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 2.7e-41 172.2 156 62.8
Sp1g01660 Schrenkiella parvula HOM05D004786 ORTHO05D005582 2.7e-41 172.2 129 67.4
AL1G12010 Arabidopsis lyrata HOM05D004786 ORTHO05D005582 1.0e-40 170.2 125 69.6
BcaC07g36997 Brassica carinata HOM05D004786 ORTHO05D005582 1.0e-40 170.2 128 66.4
C08p00190 Brassica napus HOM05D004786 ORTHO05D005582 1.0e-40 170.2 128 66.4
BolC8t46821H Brassica oleracea HOM05D004786 ORTHO05D005582 1.0e-40 170.2 128 66.4
A08p37600 Brassica napus HOM05D004786 ORTHO05D005582 1.3e-40 169.9 116 71.6
C05p01350 Brassica napus HOM05D004786 ORTHO05D005582 1.3e-40 169.9 120 69.2
BraA08t35657Z Brassica rapa HOM05D004786 ORTHO05D005582 1.3e-40 169.9 116 71.6
Carub.0001s0173 Capsella rubella HOM05D004786 ORTHO05D005582 2.9e-40 168.7 122 70.5
SHI21583 Sapria himalayana HOM05D004786 ORTHO05D005582 2.9e-40 168.7 120 72.5
A10p01370 Brassica napus HOM05D004786 ORTHO05D005582 5.0e-40 167.9 127 67.7
BolC5t28917H Brassica oleracea HOM05D004786 ORTHO05D005582 6.5e-40 167.5 120 68.3
AT1G02680 Arabidopsis thaliana HOM05D004786 ORTHO05D005582 8.5e-40 167.2 111 73.0
Psat6g162520 Pisum sativum HOM05D004786 ORTHO05D005582 1.1e-39 166.8 128 67.2
CARHR001960 Cardamine hirsuta HOM05D004786 ORTHO05D005582 3.2e-39 165.2 120 70.0
Medtr1g087370 Medicago truncatula HOM05D004786 ORTHO05D005582 3.2e-39 165.2 127 64.6
AUR62011833 Chenopodium quinoa HOM05D004786 ORTHO05D005582 4.2e-39 164.9 167 54.5
BraA10t42413Z Brassica rapa HOM05D004786 ORTHO05D005582 5.5e-39 164.5 125 64.8
Mapoly0033s0143 Marchantia polymorpha HOM05D004786 ORTHO05D005582 9.4e-39 163.7 120 71.7
Glyma.10G002500 Glycine max HOM05D004786 ORTHO05D005582 1.2e-38 163.3 104 76.9
Lsat_1_v5_gn_3_69620 Lactuca sativa HOM05D004786 ORTHO05D005582 1.2e-38 163.3 125 72.0
TAR633G1250 Trochodendron aralioides HOM05D004786 ORTHO05D005582 2.7e-38 162.2 95 83.2
Gohir.A07G224200 Gossypium hirsutum HOM05D004786 ORTHO05D005582 4.7e-38 161.4 92 84.8
Aa31LG1G9890 Aethionema arabicum HOM05D004786 ORTHO05D005582 3.0e-37 158.7 163 54.6
DCAR_030468 Daucus carota HOM05D004786 ORTHO05D005582 4.4e-36 154.8 96 80.2
AagrBONN_evm.TU.Sc2ySwM_228.4423 Anthoceros agrestis HOM05D004786 ORTHO05D005582 9.8e-36 153.7 114 64.9
AagrBONN_evm.TU.Sc2ySwM_344.2318 Anthoceros agrestis HOM05D004786 ORTHO05D005582 1.3e-35 153.3 126 62.7
AagrBONN_evm.TU.Sc2ySwM_362.2238 Anthoceros agrestis HOM05D004786 ORTHO05D005582 1.7e-35 152.9 109 67.0
Pp3c10_23650 Physcomitrium patens HOM05D004786 ORTHO05D005582 2.2e-35 152.5 110 64.5
FvH4_6g14960 Fragaria vesca HOM05D004786 ORTHO05D005582 3.7e-35 151.8 87 81.6
Mapoly0066s0092 Marchantia polymorpha HOM05D004786 ORTHO05D005582 4.8e-35 151.4 128 60.2
ATR0068G032 Amborella trichopoda HOM05D004786 ORTHO05D005582 2.4e-34 149.1 93 80.6
Pp3c20_20300 Physcomitrium patens HOM05D004786 ORTHO05D005582 9.1e-34 147.1 129 57.4
CBR_g31434 Chara braunii HOM05D004977 ORTHO05D006454 3.5e-33 145.2 101 68.3
arahy.Tifrunner.gnm1.ann1.8ER521 Arachis hypogaea HOM05D004786 ORTHO05D005582 1.0e-32 143.7 127 61.4
arahy.Tifrunner.gnm1.ann1.NH5DW8 Arachis hypogaea HOM05D004786 ORTHO05D005582 5.0e-32 141.4 127 61.4
HPP92_025545 Vanilla planifolia HOM05D004786 ORTHO05D005582 5.0e-32 141.4 90 75.6
Actinidia12745 Actinidia chinensis HOM05D004786 ORTHO05D005582 9.5e-31 137.1 82 85.4
SMO172G0161 Selaginella moellendorffii HOM05D004786 ORTHO05D005582 2.8e-30 135.6 117 59.0
HanXRQChr04g0094601 Helianthus annuus HOM05D004786 ORTHO05D005582 4.0e-29 131.7 83 83.1
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 1.2e-28 130.2 84 75.0
PGSC0003DMG400028899 Solanum tuberosum HOM05D000457 ORTHO05D000560 1.8e-26 122.9 78 78.2
BcaB03g13505 Brassica carinata HOM05D004786 ORTHO05D005582 3.8e-24 115.2 76 71.1
MD02G1287100 Malus domestica HOM05D004786 ORTHO05D005582 5.0e-24 114.8 69 79.7
HPP92_025439 Vanilla planifolia HOM05D004786 ORTHO05D005582 1.5e-23 113.2 63 81.0
BcaB03g15799 Brassica carinata HOM05D004786 ORTHO05D005582 1.9e-23 112.8 92 60.9
Solyc06g036200.2 Solanum lycopersicum HOM05D004786 ORTHO05D005582 4.7e-22 108.2 95 58.9
MCO05G258 Micromonas commoda HOM05D004786 ORTHO05D005582 8.0e-22 107.5 105 49.5
SGA_v2.0_scaffold334G49058 Striga asiatica HOM05D004395 ORTHO05D005234 5.2e-21 104.8 61 83.6
arahy.Tifrunner.gnm1.ann1.17AZVE Arachis hypogaea HOM05D004786 ORTHO05D005582 2.6e-20 102.4 124 50.0
Dinv10078 Davidia involucrata HOM05D004786 ORTHO05D005582 2.0e-17 92.8 77 63.6
PRCOL_00006976 Prasinoderma coloniale HOM05D004786 ORTHO05D005582 2.7e-17 92.4 103 40.8
Haze_27741 Corylus avellana HOM05D004786 ORTHO05D005582 3.5e-17 92.0 89 50.6
Cre04.g222100 Chlamydomonas reinhardtii HOM05D004786 ORTHO05D005582 1.2e-14 83.6 114 43.0
MD02G1287200 Malus domestica HOM05D004786 ORTHO05D005582 4.4e-12 75.1 47 76.6
Cfa022415 Carpinus fangiana HOM05D004786 ORTHO05D005582 1.3e-11 73.6 93 37.6
Gohir.D07G231500 Gossypium hirsutum HOM05D004786 ORTHO05D005582 1.7e-11 73.2 65 58.5
SEGI_38506 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.6e-09 65.1 35 88.6


User provided reference genes

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