Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028072 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 0.0e+00 1127.5 636 100.0
Dinv07531 Davidia involucrata HOM05D003743 ORTHO05D004311 3.9e-263 911.4 637 80.8
Hma1.2p1_0126F.1_g059170 Hydrangea macrophylla HOM05D003743 ORTHO05D004311 4.5e-235 818.1 635 73.5
Thecc.06G191600 Theobroma cacao HOM05D003743 ORTHO05D004311 7.3e-233 810.8 639 73.4
Duzib160G0164 Durio zibethinus HOM05D003743 ORTHO05D004311 2.9e-229 798.9 649 71.6
CiPaw.10G046600 Carya illinoinensis HOM05D003743 ORTHO05D004311 1.4e-228 796.6 639 72.9
Haze_06507 Corylus avellana HOM05D003743 ORTHO05D004311 7.0e-228 794.3 640 72.8
CSS0027200 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 1.2e-227 793.5 634 74.3
RhsimUnG0044100 Rhododendron simsii HOM05D003743 ORTHO05D004311 1.7e-226 789.6 649 73.2
CsaV3_4G005020 Cucumis sativus L. HOM05D003743 ORTHO05D004311 9.5e-225 783.9 644 69.9
Duzib235G1026 Durio zibethinus HOM05D003743 ORTHO05D004311 9.5e-225 783.9 639 70.7
Gohir.D10G024500 Gossypium hirsutum HOM05D003743 ORTHO05D004311 9.5e-225 783.9 640 71.9
Manes.16G024900 Manihot esculenta HOM05D003743 ORTHO05D004311 1.6e-224 783.1 642 69.6
Prupe.3G050300 Prunus persica HOM05D003743 ORTHO05D004311 2.8e-224 782.3 640 70.6
Glyma.07G194200 Glycine max HOM05D003743 ORTHO05D004311 3.6e-224 781.9 641 70.4
Gohir.A10G023800 Gossypium hirsutum HOM05D003743 ORTHO05D004311 6.2e-224 781.2 640 71.6
Rhsim07G0025200 Rhododendron simsii HOM05D003743 ORTHO05D004311 2.3e-223 779.2 649 72.4
MELO3C017564.2 Cucumis melo HOM05D003743 ORTHO05D004311 5.2e-223 778.1 644 71.0
Gorai.011G025800 Gossypium raimondii HOM05D003743 ORTHO05D004311 1.2e-222 776.9 640 71.6
COL.COLO4_31510 Corchorus olitorius HOM05D003743 ORTHO05D004311 4.4e-222 775.0 639 71.4
Cc02_g12930 Coffea canephora HOM05D003743 ORTHO05D004311 4.9e-221 771.5 632 71.0
Potri.004G039500 Populus trichocarpa HOM05D003743 ORTHO05D004311 6.4e-221 771.2 642 68.8
Glyma.13G182500 Glycine max HOM05D003743 ORTHO05D004311 3.2e-220 768.8 641 69.4
MD10G1061800 Malus domestica HOM05D003743 ORTHO05D004311 3.5e-219 765.4 641 69.6
Psat7g112160 Pisum sativum HOM05D003743 ORTHO05D004311 3.9e-218 761.9 637 68.3
Phvul.002G226300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 5.0e-218 761.5 638 69.0
Cpa.g.sc27.76 Carica papaya HOM05D003743 ORTHO05D004311 3.3e-217 758.8 645 67.9
Potri.011G047900 Populus trichocarpa HOM05D003743 ORTHO05D004311 7.3e-217 757.7 646 67.5
Sabra04G0024300 Salix brachista HOM05D003743 ORTHO05D004311 9.5e-217 757.3 640 69.5
VMungo0251G3484 Vigna mungo HOM05D003743 ORTHO05D004311 1.2e-216 756.9 639 69.0
PGR042G1300 Punica granatum HOM05D003743 ORTHO05D004311 1.6e-216 756.5 651 67.6
TAR627G0572 Trochodendron aralioides HOM05D003743 ORTHO05D004311 6.2e-216 754.6 647 68.3
Eucgr.E03353 Eucalyptus grandis HOM05D003743 ORTHO05D004311 8.1e-216 754.2 641 68.5
RcHm_v2.0_Chr5g0007801 Rosa chinensis HOM05D003743 ORTHO05D004311 1.8e-215 753.1 640 68.0
Medtr4g089070 Medicago truncatula HOM05D003743 ORTHO05D004311 3.1e-215 752.3 637 68.3
Sed0012938 Sechium edule HOM05D003743 ORTHO05D004311 5.2e-215 751.5 639 67.9
Ca_25733_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 8.9e-215 750.7 640 70.3
Sabra11G0033300 Salix brachista HOM05D003743 ORTHO05D004311 2.0e-214 749.6 640 66.7
TWI23G0181 Tripterygium wilfordii HOM05D003743 ORTHO05D004311 3.4e-214 748.8 638 66.9
Nitab4.5_0003668g0110 Nicotiana tabacum HOM05D003743 ORTHO05D004311 7.5e-214 747.7 635 69.8
Oeu050830.1 Olea europaea HOM05D003743 ORTHO05D004311 2.2e-213 746.1 636 68.4
Lsat_1_v5_gn_2_40361 Lactuca sativa HOM05D003743 ORTHO05D004311 2.4e-212 742.7 640 69.5
Ciclev10028000m.g Citrus clementina HOM05D003743 ORTHO05D004311 3.2e-212 742.3 638 68.0
QL05p039342 Quercus lobata HOM05D003743 ORTHO05D004311 1.2e-211 740.3 641 69.4
QL10p057179 Quercus lobata HOM05D003743 ORTHO05D004311 1.2e-211 740.3 641 69.4
Lalb_Chr05g0218341 Lupinus albus HOM05D003743 ORTHO05D004311 3.5e-211 738.8 636 67.5
FAN14G3620 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.3e-210 736.9 642 66.8
TPR.G12063 Trifolium pratense HOM05D003743 ORTHO05D004311 2.3e-210 736.1 638 69.1
FAN16G2290 Fragaria x ananassa HOM05D003743 ORTHO05D004311 6.6e-210 734.6 642 66.7
Nitab4.5_0003347g0010 Nicotiana tabacum HOM05D003743 ORTHO05D004311 1.1e-209 733.8 640 68.4
Solyc02g078580.1 Solanum lycopersicum HOM05D003743 ORTHO05D004311 1.5e-209 733.4 646 67.6
Sopen02g023440 Solanum pennellii HOM05D003743 ORTHO05D004311 1.9e-209 733.0 646 67.5
THA.LOC104819165 Tarenaya hassleriana HOM05D003743 ORTHO05D004311 4.3e-209 731.9 638 65.7
PGSC0003DMG400022434 Solanum tuberosum HOM05D003743 ORTHO05D004311 3.6e-208 728.8 646 66.7
FAN21G0113 Fragaria x ananassa HOM05D003743 ORTHO05D004311 8.1e-208 727.6 642 66.0
Peaxi162Scf00379g00092 Petunia axillaris HOM05D003743 ORTHO05D004311 1.1e-207 727.2 640 68.8
FvH4_3g04783 Fragaria vesca HOM05D003743 ORTHO05D004311 1.4e-207 726.9 642 66.2
Lj4g0023106 Lotus japonicus HOM05D003743 ORTHO05D004311 3.4e-206 722.2 641 68.8
FAN03G0627 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.7e-205 718.8 642 66.0
TAR629G2996 Trochodendron aralioides HOM05D003743 ORTHO05D004311 1.6e-203 713.4 645 65.6
arahy.Tifrunner.gnm1.ann1.I4CLDN Arachis hypogaea HOM05D003743 ORTHO05D004311 1.7e-202 709.9 643 65.8
Atru.chr7.2377 Acer truncatum HOM05D003743 ORTHO05D004311 1.9e-201 706.4 636 67.1
CAN.G1627.16 Capsicum annuum HOM05D003743 ORTHO05D004311 1.9e-201 706.4 645 66.4
DCAR_008049 Daucus carota HOM05D003743 ORTHO05D004311 2.1e-200 703.0 637 65.8
DCAR_004097 Daucus carota HOM05D003743 ORTHO05D004311 1.1e-199 700.7 642 67.0
Aa31LG2G9550 Aethionema arabicum HOM05D003743 ORTHO05D004311 3.1e-199 699.1 637 63.7
QL03p016879 Quercus lobata HOM05D003743 ORTHO05D004311 4.4e-198 695.3 639 64.5
CANSAT35G0257 Cannabis sativa HOM05D003743 ORTHO05D004311 1.3e-197 693.7 655 65.5
Thhalv10023338m.g Eutrema salsugineum HOM05D003743 ORTHO05D004311 1.9e-196 689.9 638 62.2
Migut.M01180 Erythranthe guttata HOM05D003743 ORTHO05D004311 2.4e-196 689.5 639 63.4
Nn1g07800 Nelumbo nucifera HOM05D003743 ORTHO05D004311 5.4e-196 688.3 647 65.5
Carub.0002s0416 Capsella rubella HOM05D003743 ORTHO05D004311 7.8e-195 684.5 637 62.3
BcaC06g31829 Brassica carinata HOM05D003743 ORTHO05D004311 1.3e-194 683.7 639 63.8
Prupe.6G309900 Prunus persica HOM05D003743 ORTHO05D004311 1.3e-194 683.7 640 62.5
AT1G61040 Arabidopsis thaliana HOM05D003743 ORTHO05D004311 1.5e-193 680.2 637 62.0
HanXRQChr10g0285841 Helianthus annuus HOM05D003743 ORTHO05D004311 1.5e-193 680.2 640 64.8
AL2G15400 Arabidopsis lyrata HOM05D003743 ORTHO05D004311 5.6e-193 678.3 635 62.0
Lj8P171T25 Lonicera japonica HOM05D003743 ORTHO05D004311 4.8e-192 675.2 517 73.1
SGA_v2.0_scaffold100G29640 Striga asiatica HOM05D003743 ORTHO05D004311 6.9e-191 671.4 634 63.9
unitig_748.g8020 Utricularia gibba HOM05D003743 ORTHO05D004311 1.2e-190 670.6 635 63.5
CARHR052180 Cardamine hirsuta HOM05D003743 ORTHO05D004311 1.5e-190 670.2 633 61.1
RcHm_v2.0_Chr3g0457571 Rosa chinensis HOM05D003743 ORTHO05D004311 2.6e-190 669.5 640 60.8
Sp2g03480 Schrenkiella parvula HOM05D003743 ORTHO05D004311 3.4e-190 669.1 636 61.9
FvH4_6g07870 Fragaria vesca HOM05D003743 ORTHO05D004311 2.2e-189 666.4 640 60.9
SalBow8G3648 Salvia bowleyana HOM05D003743 ORTHO05D004311 1.4e-188 663.7 642 61.5
FAN14G1138 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.4e-188 662.9 640 60.8
Sc05g0007850 Simmondsia chinensis HOM05D003743 ORTHO05D004311 3.2e-188 662.5 635 63.0
BcaC02g10594 Brassica carinata HOM05D003743 ORTHO05D004311 4.2e-188 662.1 635 61.7
C01p37700 Brassica napus HOM05D003743 ORTHO05D004311 4.2e-188 662.1 639 63.2
C04p25600 Brassica napus HOM05D003743 ORTHO05D004311 4.2e-188 662.1 635 61.7
PSO210G5871 Papaver somniferum HOM05D003743 ORTHO05D004311 3.0e-186 656.0 636 63.8
PSO170G2796 Papaver somniferum HOM05D003743 ORTHO05D004311 6.6e-186 654.8 636 63.5
BcaC09g49339 Brassica carinata HOM05D003743 ORTHO05D004311 1.5e-185 653.7 637 62.3
FAN05G4405 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.5e-185 653.7 640 60.0
SHI01836 Sapria himalayana HOM05D003743 ORTHO05D004311 4.3e-185 652.1 642 61.4
Aqoxy1G03805 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 7.4e-185 651.4 640 60.9
FAN09G3903 Fragaria x ananassa HOM05D003743 ORTHO05D004311 9.6e-185 651.0 640 59.8
A01p29850 Brassica napus HOM05D003743 ORTHO05D004311 1.3e-184 650.6 642 63.6
Ah.09g235750 Amaranthus hybridus HOM05D003743 ORTHO05D004311 1.6e-184 650.2 644 60.9
Glyma.03G168800 Glycine max HOM05D003743 ORTHO05D004311 2.8e-184 649.4 637 63.9
BcaB04g20309 Brassica carinata HOM05D003743 ORTHO05D004311 7.1e-180 634.8 647 60.3
Glyma.19G170200 Glycine max HOM05D003743 ORTHO05D004311 2.1e-179 633.3 637 61.2
MBI04_g36401_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 6.0e-179 631.7 650 60.6
BraA01t03113Z Brassica rapa HOM05D003743 ORTHO05D004311 3.0e-178 629.4 641 62.6
EL10Ac8g20336 Beta vulgaris HOM05D003743 ORTHO05D004311 3.9e-178 629.0 644 59.6
Phvul.001G167200 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 5.1e-178 628.6 640 60.8
DCAR_004099 Daucus carota HOM05D003743 ORTHO05D004311 6.7e-178 628.2 636 60.7
ECA240G0220 Erigeron canadensis HOM05D003743 ORTHO05D004311 7.4e-177 624.8 659 58.7
FAN25G1603 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.8e-176 622.9 588 63.8
Lj1g0019037 Lotus japonicus HOM05D003743 ORTHO05D004311 1.2e-174 617.5 641 62.1
FAN02G2028 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.6e-174 616.3 640 57.0
ATR0763G146 Amborella trichopoda HOM05D003743 ORTHO05D004311 1.0e-173 614.4 641 61.2
Lalb_Chr16g0383591 Lupinus albus HOM05D003743 ORTHO05D004311 3.8e-173 612.5 635 59.7
HPP92_024423 Vanilla planifolia HOM05D003743 ORTHO05D004311 4.9e-173 612.1 642 56.7
Ca_08759_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 3.2e-172 609.4 523 66.9
Ca_30219_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 3.2e-172 609.4 523 66.9
Ah.04g152550 Amaranthus hybridus HOM05D003743 ORTHO05D004311 4.6e-171 605.5 638 57.2
MD04G1191400 Malus domestica HOM05D003743 ORTHO05D004311 1.8e-170 603.6 637 56.0
AUR62016972 Chenopodium quinoa HOM05D003743 ORTHO05D004311 3.0e-170 602.8 647 57.0
Actinidia05611 Actinidia chinensis HOM05D003743 ORTHO05D004311 1.1e-169 600.9 402 84.8
Psat3g052160 Pisum sativum HOM05D003743 ORTHO05D004311 9.6e-169 597.8 636 60.5
AUR62014784 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.3e-165 587.4 641 57.6
CDE02G2043 Ceratophyllum demersum HOM05D003743 ORTHO05D004311 1.7e-165 587.0 642 57.0
TPR.G30857 Trifolium pratense HOM05D003743 ORTHO05D004311 5.0e-165 585.5 636 60.1
VMungo1383G3375 Vigna mungo HOM05D003743 ORTHO05D004311 5.0e-165 585.5 637 58.4
MBI16_g34925_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 1.6e-163 580.5 646 57.7
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.0e-162 577.8 637 54.9
CANSAT54G1490 Cannabis sativa HOM05D003743 ORTHO05D004311 3.0e-162 576.2 637 55.6
Phvul.001G224300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 6.7e-162 575.1 644 54.2
Aqoxy3G03252 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 3.7e-160 569.3 640 55.0
VMungo1383G2741 Vigna mungo HOM05D003743 ORTHO05D004311 1.8e-159 567.0 645 54.7
Lalb_Chr04g0260391 Lupinus albus HOM05D003743 ORTHO05D004311 1.7e-157 560.5 650 53.2
SEGI_13209 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 1.4e-156 557.4 639 56.5
MBI16_g34928_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 5.7e-153 545.4 648 56.0
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 9.7e-153 544.7 635 52.4
Glyma.03G230500 Glycine max HOM05D003743 ORTHO05D004311 1.1e-151 541.2 650 53.4
Medtr7g099060 Medicago truncatula HOM05D003743 ORTHO05D004311 1.0e-149 534.6 545 58.5
Lj1g0026238 Lotus japonicus HOM05D003743 ORTHO05D004311 3.7e-144 516.2 636 49.8
Ca_20186_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 7.7e-142 508.4 664 49.1
arahy.Tifrunner.gnm1.ann1.58ANB0 Arachis hypogaea HOM05D003743 ORTHO05D004311 5.0e-141 505.8 655 50.7
Zm00001eb410600 Zea mays HOM05D003743 ORTHO05D004311 1.6e-139 500.7 644 52.5
TPR.G34103 Trifolium pratense HOM05D003743 ORTHO05D004311 1.4e-138 497.7 658 49.1
Psat7g225840 Pisum sativum HOM05D003743 ORTHO05D004311 2.3e-138 496.9 656 49.5
Zm00001eb137720 Zea mays HOM05D003743 ORTHO05D004311 1.3e-136 491.1 643 50.9
EL10Ac8g18529 Beta vulgaris HOM05D003743 ORTHO05D004311 9.1e-135 485.0 523 57.4
Medtr4g032885 Medicago truncatula HOM05D003743 ORTHO05D004311 5.9e-134 482.3 657 50.5
Sc06g0009130 Simmondsia chinensis HOM05D003743 ORTHO05D004311 1.5e-132 477.6 641 49.3
Os12g0535900 Oryza sativa ssp. japonica HOM05D003743 ORTHO05D004311 3.0e-130 469.9 596 51.3
Glyma.13G060000 Glycine max HOM05D003743 ORTHO05D004311 1.1e-127 461.5 403 67.0
FvH4_6g03621 Fragaria vesca HOM05D003743 ORTHO05D004311 4.9e-120 436.0 405 64.0
BolC1t03734H Brassica oleracea HOM05D003743 ORTHO05D004311 1.8e-119 434.1 427 63.5
Mapoly0001s0024 Marchantia polymorpha HOM05D003743 ORTHO05D004311 2.7e-110 403.7 586 44.0
Pp3c12_17420 Physcomitrium patens HOM05D003743 ORTHO05D004311 5.0e-109 399.4 590 46.1
AagrBONN_evm.TU.Sc2ySwM_368.1522 Anthoceros agrestis HOM05D003743 ORTHO05D004311 2.1e-107 394.0 644 43.8
Lj1P877T22 Lonicera japonica HOM05D003743 ORTHO05D004311 3.9e-101 373.2 312 67.9
A03p68920 Brassica napus HOM05D003743 ORTHO05D004311 5.6e-100 369.4 636 46.4
Oeu016117.1 Olea europaea HOM05D003743 ORTHO05D004311 5.6e-84 316.2 634 42.3
Mapoly0009s0176 Marchantia polymorpha HOM05D003743 ORTHO05D004311 4.4e-81 306.6 644 38.2
BraSC39t46172Z Brassica rapa HOM05D003743 ORTHO05D004311 7.8e-78 295.8 516 44.8
ECA248G2279 Erigeron canadensis HOM05D003743 ORTHO05D004311 1.3e-77 295.0 420 46.9
GSVIVG01006453001 Vitis vinifera HOM05D003743 ORTHO05D004311 3.3e-76 290.4 220 74.1
SMO118G0429 Selaginella moellendorffii HOM05D003743 ORTHO05D004311 2.4e-71 274.2 529 38.4
Zm00001eb087640 Zea mays HOM05D003743 ORTHO05D004311 4.2e-55 220.3 272 47.1
CBR_g30024 Chara braunii HOM05D003743 ORTHO05D004311 3.1e-50 204.1 606 31.0
MBI04_g35990_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 1.9e-39 168.3 226 54.0
Lalb_Chr20g0113451 Lupinus albus HOM05D003743 ORTHO05D004311 6.9e-34 149.8 119 60.5
Aqoxy3G03215 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 2.8e-27 127.9 109 58.7
EL10Ac4g08952 Beta vulgaris HOM05D003743 ORTHO05D004311 2.4e-26 124.8 157 51.6
MD05G1317500 Malus domestica HOM05D003743 ORTHO05D004311 7.0e-26 123.2 125 59.2
ECA246G3327 Erigeron canadensis HOM05D001482 ORTHO05D001499 7.2e-23 113.2 88 67.0
SGA_v2.0_scaffold49G18283 Striga asiatica HOM05D003743 ORTHO05D004311 2.7e-22 111.3 140 43.6
Aqoxy3G03214 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 2.0e-20 105.1 78 71.8
Rhsim02G0125200 Rhododendron simsii HOM05D003743 ORTHO05D004311 2.0e-20 105.1 61 78.7
FvH4_6g03622 Fragaria vesca HOM05D003743 ORTHO05D004311 1.4e-18 99.0 53 88.7
EL10Ac5g12107 Beta vulgaris HOM05D003743 ORTHO05D004311 1.3e-11 75.9 60 63.3
Aqoxy3G03213 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.8e-10 72.0 56 62.5
PRCOL_00005809 Prasinoderma coloniale HOM05D003743 ORTHO05D004311 5.4e-10 70.5 265 25.3
Nitab4.5_0000556g0130 Nicotiana tabacum HOM05D002396 ORTHO05D002779 1.6e-09 68.9 87 52.9
Cre03.g196450 Chlamydomonas reinhardtii HOM05D003743 ORTHO05D004311 5.9e-09 67.0 471 22.1
Lj8E171T0 Lonicera japonica HOM05D003743 ORTHO05D004311 2.5e-07 61.6 83 60.2
arahy.Tifrunner.gnm1.ann1.8T1JJH Arachis hypogaea HOM05D003743 ORTHO05D004311 7.2e-07 60.1 142 42.3


User provided reference genes

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