Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025577 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 1.2e-46 189.5 96 100.0
CSS0045322 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 1.3e-45 186.0 96 97.9
CSS0041671 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 2.6e-33 145.2 96 84.4
Actinidia18277 Actinidia chinensis HOM05D007034 ORTHO05D008665 1.1e-23 113.2 70 80.0
Lj5C84G9 Lonicera japonica HOM05D007034 ORTHO05D008665 7.1e-23 110.5 70 78.6
ECA246G4515 Erigeron canadensis HOM05D007034 ORTHO05D008665 2.1e-22 109.0 70 77.1
HanXRQChr05g0154511 Helianthus annuus HOM05D007034 ORTHO05D008665 1.0e-21 106.7 70 75.7
DCAR_025620 Daucus carota HOM05D007034 ORTHO05D008665 1.3e-21 106.3 70 74.3
Rhsim08G0200400 Rhododendron simsii HOM05D007034 ORTHO05D008665 1.7e-21 105.9 70 74.3
Nitab4.5_0000976g0250 Nicotiana tabacum HOM05D007034 ORTHO05D008665 2.3e-21 105.5 71 73.2
SalBow7G3686 Salvia bowleyana HOM05D007034 ORTHO05D008665 3.0e-21 105.1 70 71.4
Cc04_g05570 Coffea canephora HOM05D007034 ORTHO05D008665 5.1e-21 104.4 70 72.9
Nitab4.5_0009037g0010 Nicotiana tabacum HOM05D007034 ORTHO05D008665 5.1e-21 104.4 70 72.9
Lsat_1_v5_gn_5_9280 Lactuca sativa HOM05D007034 ORTHO05D008665 8.6e-21 103.6 70 71.4
Oeu012864.4 Olea europaea HOM05D007034 ORTHO05D008665 8.6e-21 103.6 70 71.4
SGA_v2.0_scaffold37G14662 Striga asiatica HOM05D007034 ORTHO05D008665 8.6e-21 103.6 71 70.4
Dinv13693 Davidia involucrata HOM05D007034 ORTHO05D008665 1.1e-20 103.2 70 72.9
PGSC0003DMG400014226 Solanum tuberosum HOM05D007034 ORTHO05D008665 1.1e-20 103.2 70 71.4
CAN.G1008.36 Capsicum annuum HOM05D007034 ORTHO05D008665 1.9e-20 102.4 70 71.4
Migut.I00651 Erythranthe guttata HOM05D007034 ORTHO05D008665 2.5e-20 102.1 70 70.0
Peaxi162Scf00314g00825 Petunia axillaris HOM05D007034 ORTHO05D008665 2.5e-20 102.1 70 71.4
Solyc03g117960.4 Solanum lycopersicum HOM05D007034 ORTHO05D008665 2.5e-20 102.1 70 70.0
Sopen03g036860 Solanum pennellii HOM05D007034 ORTHO05D008665 2.5e-20 102.1 70 70.0
Ciclev10030559m.g Citrus clementina HOM05D007034 ORTHO05D008665 3.3e-20 101.7 67 73.1
GSVIVG01014061001 Vitis vinifera HOM05D007034 ORTHO05D008665 4.3e-20 101.3 68 75.0
Potri.012G111800 Populus trichocarpa HOM05D007034 ORTHO05D008665 9.5e-20 100.1 70 71.4
Nn3g16191 Nelumbo nucifera HOM05D007034 ORTHO05D008665 1.6e-19 99.4 68 73.5
Sabra12G0081400 Salix brachista HOM05D007034 ORTHO05D008665 3.6e-19 98.2 67 71.6
Manes.06G128800 Manihot esculenta HOM05D007034 ORTHO05D008665 2.3e-18 95.5 60 78.3
TAR374G0491 Trochodendron aralioides HOM05D007034 ORTHO05D008665 5.2e-18 94.4 69 71.0
CANSAT56G2345 Cannabis sativa HOM05D007034 ORTHO05D008665 1.2e-17 93.2 60 75.0
Ca_16833_v3 Cicer arietinum L. HOM05D007034 ORTHO05D008665 1.5e-17 92.8 67 64.2
Haze_19381 Corylus avellana HOM05D007034 ORTHO05D008665 1.5e-17 92.8 68 70.6
Lalb_Chr07g0183941 Lupinus albus HOM05D007034 ORTHO05D008665 2.0e-17 92.4 67 62.7
Psat7g040600 Pisum sativum HOM05D007034 ORTHO05D008665 2.0e-17 92.4 70 61.4
Thecc.03G143600 Theobroma cacao HOM05D007034 ORTHO05D008665 2.6e-17 92.0 74 64.9
Eucgr.G00023 Eucalyptus grandis HOM05D007034 ORTHO05D008665 3.4e-17 91.7 71 67.6
TPR.G12786 Trifolium pratense HOM05D007034 ORTHO05D008665 3.4e-17 91.7 67 62.7
QL10p035731 Quercus lobata HOM05D007034 ORTHO05D008665 5.8e-17 90.9 68 70.6
Medtr8g095490 Medicago truncatula HOM05D007034 ORTHO05D008665 7.6e-17 90.5 60 68.3
Cpa.g.sc13.204 Carica papaya HOM05D007034 ORTHO05D008665 9.9e-17 90.1 67 65.7
Duzib205G0091 Durio zibethinus HOM05D007034 ORTHO05D008665 1.3e-16 89.7 71 66.2
MBI11_g45190_MAGBIO Magnolia biondii HOM05D007034 ORTHO05D008665 1.3e-16 89.7 68 67.6
Prupe.5G138100 Prunus persica HOM05D007034 ORTHO05D008665 1.3e-16 89.7 67 65.7
Atru.BG.50.p Acer truncatum HOM05D007034 ORTHO05D008665 1.7e-16 89.4 67 64.2
MD06G1128300 Malus domestica HOM05D007034 ORTHO05D008665 1.7e-16 89.4 67 64.2
PGR042G1727 Punica granatum HOM05D007034 ORTHO05D008665 2.2e-16 89.0 72 63.9
Gohir.D07G050000 Gossypium hirsutum HOM05D007034 ORTHO05D008665 2.9e-16 88.6 71 64.8
arahy.Tifrunner.gnm1.ann1.XWK03B Arachis hypogaea HOM05D007034 ORTHO05D008665 3.7e-16 88.2 68 63.2
VMungo0251G1097 Vigna mungo HOM05D007034 ORTHO05D008665 3.7e-16 88.2 68 63.2
FAN04G0206 Fragaria x ananassa HOM05D007034 ORTHO05D008665 6.4e-16 87.4 67 64.2
Gorai.001G053100 Gossypium raimondii HOM05D007034 ORTHO05D008665 6.4e-16 87.4 71 63.4
RcHm_v2.0_Chr7g0188231 Rosa chinensis HOM05D007034 ORTHO05D008665 8.3e-16 87.0 67 64.2
FAN08G2641 Fragaria x ananassa HOM05D007034 ORTHO05D008665 1.1e-15 86.7 67 64.2
Glyma.08G005800 Glycine max HOM05D007034 ORTHO05D008665 1.4e-15 86.3 69 60.9
Phvul.002G279600 Phaseolus vulgaris HOM05D007034 ORTHO05D008665 1.4e-15 86.3 69 59.4
Lj4g0024388 Lotus japonicus HOM05D007034 ORTHO05D008665 1.9e-15 85.9 68 61.8
HPP92_006434 Vanilla planifolia HOM05D007034 ORTHO05D008665 1.9e-15 85.9 72 61.1
Ah.15g089920 Amaranthus hybridus HOM05D007034 ORTHO05D008665 2.4e-15 85.5 68 61.8
EL10Ac7g17117 Beta vulgaris HOM05D007034 ORTHO05D008665 2.4e-15 85.5 68 61.8
Aqoxy5G02954 Aquilegia oxysepala HOM05D007034 ORTHO05D008665 3.2e-15 85.1 69 58.0
PSO017G2510 Papaver somniferum HOM05D007034 ORTHO05D008665 3.2e-15 85.1 68 60.3
arahy.Tifrunner.gnm1.ann1.FYEN8G Arachis hypogaea HOM05D007034 ORTHO05D008665 4.1e-15 84.7 68 61.8
TWI23G0512 Tripterygium wilfordii HOM05D007034 ORTHO05D008665 7.1e-15 84.0 68 64.7
PSO017G4759 Papaver somniferum HOM05D007034 ORTHO05D008665 9.2e-15 83.6 68 58.8
AUR62029782 Chenopodium quinoa HOM05D007034 ORTHO05D008665 1.2e-14 83.2 68 61.8
Gohir.A07G045600 Gossypium hirsutum HOM05D007034 ORTHO05D008665 1.6e-14 82.8 71 62.0
THA.LOC104818293 Tarenaya hassleriana HOM05D007034 ORTHO05D008665 3.5e-14 81.6 69 62.3
FAN18G0345 Fragaria x ananassa HOM05D007034 ORTHO05D008665 4.6e-14 81.3 67 61.2
Os04g0403400 Oryza sativa ssp. japonica HOM05D007034 ORTHO05D008665 4.6e-14 81.3 72 52.8
Sc10g0005150 Simmondsia chinensis HOM05D007034 ORTHO05D008665 4.6e-14 81.3 69 62.3
Aa31LG3G18970 Aethionema arabicum HOM05D007034 ORTHO05D008665 1.0e-13 80.1 69 62.3
CBR_g36305 Chara braunii HOM05D007034 ORTHO05D008665 1.3e-13 79.7 71 54.9
BcaB05g21618 Brassica carinata HOM05D007034 ORTHO05D008665 3.9e-13 78.2 69 59.4
Zm00001eb084530 Zea mays HOM05D007034 ORTHO05D008665 5.1e-13 77.8 71 52.1
Sp6g35470 Schrenkiella parvula HOM05D007034 ORTHO05D008665 6.6e-13 77.4 69 58.0
BraA02t04915Z Brassica rapa HOM05D007034 ORTHO05D008665 1.1e-12 76.6 69 58.0
Thhalv10012509m.g Eutrema salsugineum HOM05D007034 ORTHO05D008665 1.9e-12 75.9 69 59.4
BcaB05g21619 Brassica carinata HOM05D007034 ORTHO05D008665 2.5e-12 75.5 69 58.0
BcaC03g13189 Brassica carinata HOM05D007034 ORTHO05D008665 2.5e-12 75.5 69 58.0
C02p03100 Brassica napus HOM05D007034 ORTHO05D008665 2.5e-12 75.5 69 58.0
BolC2t06271H Brassica oleracea HOM05D007034 ORTHO05D008665 2.5e-12 75.5 69 58.0
SEGI_36690 Sequoiadendron giganteum HOM05D007034 ORTHO05D008665 2.5e-12 75.5 61 62.3
AL6G17700 Arabidopsis lyrata HOM05D007034 ORTHO05D008665 1.2e-11 73.2 69 56.5
CARHR205750 Cardamine hirsuta HOM05D007034 ORTHO05D008665 1.2e-11 73.2 62 62.9
Carub.0006s0637 Capsella rubella HOM05D007034 ORTHO05D008665 2.1e-11 72.4 69 56.5
AagrBONN_evm.TU.Sc2ySwM_340.151 Anthoceros agrestis HOM05D007034 ORTHO05D008665 5.2e-10 67.8 71 52.1
ATR0582G190 Amborella trichopoda HOM05D007034 ORTHO05D008665 4.4e-09 64.7 54 51.9
SMO139G0138 Selaginella moellendorffii HOM05D007034 ORTHO05D008665 3.8e-08 61.6 61 50.8
FvH4_5g10030 Fragaria vesca HOM05D007034 ORTHO05D008665 1.1e-07 60.1 67 55.2
MBI11_g13136_MAGBIO Magnolia biondii HOM05D007034 ORTHO05D008665 1.4e-07 59.7 68 52.9
Glyma.05G198600 Glycine max HOM05D007034 ORTHO05D008665 1.2e-06 56.6 69 46.4
Glyma.17G184700 Glycine max HOM05D007034 ORTHO05D006448 3.5e-06 55.1 32 65.6


User provided reference genes

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