Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024750 Camellia sinensis var. sinensis HOM05D001529 ORTHO05D024706 4.4e-43 177.6 90 100.0
CSS0013229 Camellia sinensis var. sinensis HOM05D001529 ORTHO05D007595 3.2e-41 171.4 88 98.9
GSVIVG01030033001 Vitis vinifera HOM05D001529 ORTHO05D007595 4.0e-36 154.5 88 84.1
Hma1.2p1_0405F.1_g145710 Hydrangea macrophylla HOM05D001529 ORTHO05D007595 2.6e-35 151.8 85 88.2
Hma1.2p1_0405F.1_g145720 Hydrangea macrophylla HOM05D001529 ORTHO05D007595 2.6e-35 151.8 85 88.2
TAR626G0907 Trochodendron aralioides HOM05D001529 ORTHO05D007595 3.4e-35 151.4 88 81.8
QL93p0116_0063 Quercus lobata HOM05D001529 ORTHO05D007595 2.9e-34 148.3 87 82.8
Actinidia21451 Actinidia chinensis HOM05D001529 ORTHO05D007595 4.9e-34 147.5 88 85.2
Haze_12706 Corylus avellana HOM05D001529 ORTHO05D007595 6.4e-34 147.1 87 81.6
Rhsim04G0043200 Rhododendron simsii HOM05D001529 ORTHO05D007595 8.3e-34 146.7 86 83.7
CiPaw.03G277800 Carya illinoinensis HOM05D001529 ORTHO05D007595 1.1e-33 146.4 88 81.8
Sc20g0003910 Simmondsia chinensis HOM05D001529 ORTHO05D007595 1.1e-33 146.4 88 81.8
Lj1C790T8 Lonicera japonica HOM05D001529 ORTHO05D007595 1.4e-33 146.0 85 83.5
Nitab4.5_0004215g0030 Nicotiana tabacum HOM05D001529 ORTHO05D007595 1.4e-33 146.0 85 83.5
Nn1g03283 Nelumbo nucifera HOM05D001529 ORTHO05D007595 1.9e-33 145.6 88 79.5
Solyc07g048080.4 Solanum lycopersicum HOM05D001529 ORTHO05D007595 3.2e-33 144.8 85 81.2
Sopen07g024500 Solanum pennellii HOM05D001529 ORTHO05D007595 3.2e-33 144.8 85 81.2
Ciclev10018290m.g Citrus clementina HOM05D001529 ORTHO05D007595 4.1e-33 144.4 88 79.5
Rhsim04G0043300 Rhododendron simsii HOM05D001529 ORTHO05D024706 2.1e-32 142.1 85 82.4
PGR042G1774 Punica granatum HOM05D001529 ORTHO05D007595 2.7e-32 141.7 88 78.4
Migut.H01288 Erythranthe guttata HOM05D001529 ORTHO05D007595 6.0e-32 140.6 84 79.8
Sabra14G0123900 Salix brachista HOM05D001529 ORTHO05D007595 7.8e-32 140.2 88 79.5
CAN.G897.4 Capsicum annuum HOM05D001529 ORTHO05D007595 1.0e-31 139.8 85 81.2
DCAR_021112 Daucus carota HOM05D001529 ORTHO05D007595 1.0e-31 139.8 85 77.6
TWI36G1606 Tripterygium wilfordii HOM05D001529 ORTHO05D007595 1.3e-31 139.4 88 76.1
HanXRQChr10g0306381 Helianthus annuus HOM05D001529 ORTHO05D007595 2.3e-31 138.7 86 74.4
Potri.014G162200 Populus trichocarpa HOM05D001529 ORTHO05D007595 2.3e-31 138.7 88 78.4
vmacro09386 Vaccinium macrocarpon HOM05D001529 ORTHO05D007595 2.3e-31 138.7 88 79.5
Medtr3g083180 Medicago truncatula HOM05D001529 ORTHO05D007595 3.0e-31 138.3 88 78.4
Hund24142 Selenicereus undatus HOM05D001529 ORTHO05D007595 3.0e-31 138.3 88 75.0
Eucgr.A01064 Eucalyptus grandis HOM05D001529 ORTHO05D007595 3.9e-31 137.9 88 76.1
MBI19_g06153_MAGBIO Magnolia biondii HOM05D001529 ORTHO05D007595 3.9e-31 137.9 88 73.9
Eucgr.A01066 Eucalyptus grandis HOM05D001529 ORTHO05D007595 5.1e-31 137.5 88 76.1
Psat5g104480 Pisum sativum HOM05D001529 ORTHO05D007595 5.1e-31 137.5 88 78.4
TPR.G19324 Trifolium pratense HOM05D001529 ORTHO05D007595 5.1e-31 137.5 88 77.3
Sed0023062 Sechium edule HOM05D001529 ORTHO05D007595 8.6e-31 136.7 88 73.9
Aqoxy4G02192 Aquilegia oxysepala HOM05D001529 ORTHO05D007595 1.1e-30 136.3 88 76.1
Duzib138G1061 Durio zibethinus HOM05D001529 ORTHO05D007595 1.1e-30 136.3 88 77.3
Cc00_g04140 Coffea canephora HOM05D001529 ORTHO05D007595 2.5e-30 135.2 85 75.3
Phvul.009G238000 Phaseolus vulgaris HOM05D001529 ORTHO05D007595 2.5e-30 135.2 88 76.1
ECA234G3620 Erigeron canadensis HOM05D001529 ORTHO05D007595 3.3e-30 134.8 85 74.1
Lj6g0006977 Lotus japonicus HOM05D001529 ORTHO05D007595 3.3e-30 134.8 88 76.1
Glyma.19G191200 Glycine max HOM05D001529 ORTHO05D007595 4.3e-30 134.4 83 79.5
EL10Ac4g09205 Beta vulgaris HOM05D001529 ORTHO05D007595 5.6e-30 134.0 88 72.7
CsaV3_7G002750 Cucumis sativus L. HOM05D001529 ORTHO05D007595 5.6e-30 134.0 88 72.7
Lsat_1_v5_gn_5_123180 Lactuca sativa HOM05D001529 ORTHO05D007595 5.6e-30 134.0 85 75.3
Lalb_Chr14g0362561 Lupinus albus HOM05D001529 ORTHO05D007595 5.6e-30 134.0 88 75.0
ClCG02G002590 Citrullus lanatus HOM05D001529 ORTHO05D007595 7.3e-30 133.7 88 73.9
Oeu064362.2 Olea europaea HOM05D001529 ORTHO05D007595 7.3e-30 133.7 88 75.0
VMungo1080G0307 Vigna mungo HOM05D001529 ORTHO05D007595 7.3e-30 133.7 83 78.3
MSTRG.12244 Avicennia marina HOM05D001529 ORTHO05D007595 9.5e-30 133.3 88 75.0
CANSAT64G0296 Cannabis sativa HOM05D001529 ORTHO05D007595 9.5e-30 133.3 88 73.9
PGSC0003DMG400006139 Solanum tuberosum HOM05D001529 ORTHO05D007595 1.6e-29 132.5 75 88.0
Cpa.g.sc136.10 Carica papaya HOM05D001529 ORTHO05D007595 2.1e-29 132.1 84 75.0
Thecc.01G188800 Theobroma cacao HOM05D001529 ORTHO05D007595 3.6e-29 131.3 88 73.9
BcaB08g34492 Brassica carinata HOM05D001529 ORTHO05D007595 4.7e-29 131.0 88 70.5
AUR62000956 Chenopodium quinoa HOM05D001529 ORTHO05D007595 4.7e-29 131.0 88 71.6
Gorai.001G193700 Gossypium raimondii HOM05D001529 ORTHO05D007595 8.1e-29 130.2 85 75.3
Aa31sc53G50 Aethionema arabicum HOM05D001529 ORTHO05D007595 1.1e-28 129.8 88 68.2
PSO675G8054 Papaver somniferum HOM05D001529 ORTHO05D007595 1.4e-28 129.4 84 72.6
MD09G1120400 Malus domestica HOM05D001529 ORTHO05D007595 1.8e-28 129.0 88 69.3
A03p44470 Brassica napus HOM05D001529 ORTHO05D007595 2.3e-28 128.6 88 70.5
C03p55280 Brassica napus HOM05D001529 ORTHO05D007595 2.3e-28 128.6 88 70.5
BolC3t17800H Brassica oleracea HOM05D001529 ORTHO05D007595 2.3e-28 128.6 88 70.5
BraA03t13580Z Brassica rapa HOM05D001529 ORTHO05D007595 2.3e-28 128.6 88 70.5
AUR62005012 Chenopodium quinoa HOM05D001529 ORTHO05D007595 2.3e-28 128.6 88 70.5
Gohir.D07G173400 Gossypium hirsutum HOM05D001529 ORTHO05D007595 2.3e-28 128.6 84 75.0
Gohir.A07G167800 Gossypium hirsutum HOM05D001529 ORTHO05D007595 3.1e-28 128.3 85 74.1
PSO541G2760 Papaver somniferum HOM05D001529 ORTHO05D007595 3.1e-28 128.3 84 71.4
AL3G42430 Arabidopsis lyrata HOM05D001529 ORTHO05D007595 5.2e-28 127.5 88 69.3
Carub.0003s2643 Capsella rubella HOM05D001529 ORTHO05D007595 5.2e-28 127.5 88 69.3
arahy.Tifrunner.gnm1.ann1.TVN328 Arachis hypogaea HOM05D001529 ORTHO05D007595 6.8e-28 127.1 83 74.7
unitig_62.g23257 Utricularia gibba HOM05D001529 ORTHO05D007595 6.8e-28 127.1 88 73.9
Thhalv10002438m.g Eutrema salsugineum HOM05D001529 ORTHO05D007595 8.9e-28 126.7 88 68.2
Sp3g23420 Schrenkiella parvula HOM05D001529 ORTHO05D007595 8.9e-28 126.7 88 68.2
THA.LOC104815352 Tarenaya hassleriana HOM05D001529 ORTHO05D007595 1.2e-27 126.3 88 69.3
Ah.06g192740 Amaranthus hybridus HOM05D001529 ORTHO05D007595 1.5e-27 125.9 88 67.0
Manes.12G062800 Manihot esculenta HOM05D001529 ORTHO05D007595 1.5e-27 125.9 88 68.2
THA.LOC104826614 Tarenaya hassleriana HOM05D001529 ORTHO05D007595 2.0e-27 125.6 88 69.3
AT2G04842 Arabidopsis thaliana HOM05D001529 ORTHO05D007595 2.6e-27 125.2 88 68.2
arahy.Tifrunner.gnm1.ann1.6FNM9R Arachis hypogaea HOM05D001529 ORTHO05D007595 2.6e-27 125.2 83 73.5
arahy.Tifrunner.gnm1.ann1.9BA4YH Arachis hypogaea HOM05D001529 ORTHO05D007595 2.6e-27 125.2 83 73.5
CDE07G0378 Ceratophyllum demersum HOM05D001529 ORTHO05D024706 3.4e-27 124.8 88 70.5
Prupe.3G203100 Prunus persica HOM05D001529 ORTHO05D007595 3.4e-27 124.8 88 68.2
CARHR102830 Cardamine hirsuta HOM05D001529 ORTHO05D007595 1.7e-26 122.5 85 68.2
FAN02G4258 Fragaria x ananassa HOM05D001529 ORTHO05D007595 2.2e-26 122.1 88 67.0
FAN09G3924 Fragaria x ananassa HOM05D001529 ORTHO05D024706 2.2e-26 122.1 88 67.0
FAN14G1621 Fragaria x ananassa HOM05D001529 ORTHO05D007595 2.2e-26 122.1 88 68.2
FvH4_6g41340 Fragaria vesca HOM05D001529 ORTHO05D007595 2.9e-26 121.7 88 67.0
RcHm_v2.0_Chr2g0156891 Rosa chinensis HOM05D001529 ORTHO05D007595 2.9e-26 121.7 88 68.2
Zm00001eb325920 Zea mays HOM05D001529 ORTHO05D007595 2.9e-26 121.7 88 64.8
Os02g0538000 Oryza sativa ssp. japonica HOM05D001529 ORTHO05D007595 1.1e-25 119.8 86 65.1
FAN05G0710 Fragaria x ananassa HOM05D001529 ORTHO05D007595 2.4e-25 118.6 88 65.9
HPP92_022799 Vanilla planifolia HOM05D001529 ORTHO05D007595 2.1e-24 115.5 84 65.5
ATR0712G164 Amborella trichopoda HOM05D001529 ORTHO05D007595 7.8e-24 113.6 88 63.6
SGA_v2.0_scaffold49G18408 Striga asiatica HOM05D001529 ORTHO05D007595 1.7e-23 112.5 68 77.9
COL.COLO4_10294 Corchorus olitorius HOM05D001529 ORTHO05D024706 5.6e-22 107.5 88 62.5
Pp3c14_20630 Physcomitrium patens HOM05D001529 ORTHO05D007595 1.6e-21 105.9 83 61.4
Dinv07847 Davidia involucrata HOM05D001529 ORTHO05D007595 8.1e-21 103.6 57 87.7
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 1.1e-20 103.2 72 68.1
Mapoly0096s0034 Marchantia polymorpha HOM05D001529 ORTHO05D007595 3.1e-20 101.7 84 58.3
Pp3c2_11130 Physcomitrium patens HOM05D001529 ORTHO05D007595 5.2e-20 100.9 84 60.7
SEGI_09505 Sequoiadendron giganteum HOM05D001529 ORTHO05D007595 2.0e-19 99.0 85 55.3
CBR_g3851 Chara braunii HOM05D001529 ORTHO05D007595 1.1e-17 93.2 83 51.8
Peaxi162Scf02035g00017 Petunia axillaris HOM05D001529 ORTHO05D007595 7.1e-17 90.5 49 87.8
CSS0037422 Camellia sinensis var. sinensis HOM05D001529 ORTHO05D007595 2.3e-15 85.5 75 66.7
CSS0041772 Camellia sinensis var. sinensis HOM05D001529 ORTHO05D007595 2.3e-15 85.5 75 66.7
CDE04G2767 Ceratophyllum demersum HOM05D001529 ORTHO05D007595 5.1e-15 84.3 52 73.1
MCO11G246 Micromonas commoda HOM05D001529 ORTHO05D007595 8.1e-13 77.0 82 43.9
PRCOL_00005026 Prasinoderma coloniale HOM05D001529 ORTHO05D007595 5.3e-12 74.3 85 42.4
MD17G1111100 Malus domestica HOM05D001529 ORTHO05D007595 2.0e-11 72.4 44 75.0
Cre10.g421600 Chlamydomonas reinhardtii HOM05D001529 ORTHO05D007595 2.6e-11 72.0 86 43.0


User provided reference genes

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