Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024632 Camellia sinensis var. sinensis HOM05D003409 ORTHO05D004015 1.3e-70 269.6 133 100.0
CSS0004269 Camellia sinensis var. sinensis HOM05D003409 ORTHO05D004015 1.6e-57 226.1 164 75.0
Actinidia35412 Actinidia chinensis HOM05D003409 ORTHO05D004015 1.5e-07 60.1 74 48.6
CSS0010821 Camellia sinensis var. sinensis HOM05D003409 ORTHO05D004015 1.5e-07 60.1 74 48.6
Potri.001G369600 Populus trichocarpa HOM05D003409 ORTHO05D004015 1.5e-07 60.1 74 48.6
Rhsim06G0084600 Rhododendron simsii HOM05D003409 ORTHO05D004015 1.5e-07 60.1 74 48.6
Rhsim10G0056000 Rhododendron simsii HOM05D003409 ORTHO05D004015 1.5e-07 60.1 74 48.6
vmacro15782 Vaccinium macrocarpon HOM05D003409 ORTHO05D004015 1.5e-07 60.1 74 48.6
Sabra16G0242500 Salix brachista HOM05D003409 ORTHO05D004015 2.0e-07 59.7 74 47.3
Actinidia37139 Actinidia chinensis HOM05D003409 ORTHO05D004015 3.4e-07 58.9 74 47.3
Sc03g0011610 Simmondsia chinensis HOM05D003409 ORTHO05D004015 5.8e-07 58.2 75 46.7
TPR.G17957 Trifolium pratense HOM05D003409 ORTHO05D004015 7.5e-07 57.8 145 32.4
vmacro11609 Vaccinium macrocarpon HOM05D003409 ORTHO05D004015 7.5e-07 57.8 173 30.6
unitig_578.g16234 Utricularia gibba HOM05D003409 ORTHO05D004015 9.8e-07 57.4 74 45.9
Migut.H01746 Erythranthe guttata HOM05D003409 ORTHO05D004015 1.3e-06 57.0 74 47.3
Cpa.g.sc12.127 Carica papaya HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
Ca_12445_v3 Cicer arietinum L. HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
ClCG09G021450 Citrullus lanatus HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
MELO3C024955.2 Cucumis melo HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
CsaV3_7G011550 Cucumis sativus L. HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
Dinv10352 Davidia involucrata HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
Glyma.08G332000 Glycine max HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
Glyma.18G075000 Glycine max HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
Hma1.2p1_1804F.1_g303050 Hydrangea macrophylla HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
Hma1.2p1_1804F.1_g303060 Hydrangea macrophylla HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
Lj1A892G90 Lonicera japonica HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
Medtr3g460700 Medicago truncatula HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
Phvul.006G059200 Phaseolus vulgaris HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
SalBow5G1153 Salvia bowleyana HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
SGA_v2.0_scaffold1G00379 Striga asiatica HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
SGA_v2.0_scaffold42G15966 Striga asiatica HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
VMungo0540G1920 Vigna mungo HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
GSVIVG01014717001 Vitis vinifera HOM05D003409 ORTHO05D004015 1.7e-06 56.6 74 47.3
Oeu005478.2 Olea europaea HOM05D003409 ORTHO05D004015 2.2e-06 56.2 74 45.9
Oeu039418.1 Olea europaea HOM05D003409 ORTHO05D004015 2.2e-06 56.2 74 45.9
CANSAT11G2129 Cannabis sativa HOM05D003409 ORTHO05D004015 2.9e-06 55.8 74 45.9
CiPaw.11G205600 Carya illinoinensis HOM05D003409 ORTHO05D004015 2.9e-06 55.8 74 45.9
Cfa016917 Carpinus fangiana HOM05D003409 ORTHO05D004015 3.7e-06 55.5 74 45.9
Haze_09846 Corylus avellana HOM05D003409 ORTHO05D004015 3.7e-06 55.5 74 45.9
QL08p003492 Quercus lobata HOM05D003409 ORTHO05D004015 3.7e-06 55.5 74 45.9
Hund01870 Selenicereus undatus HOM05D003409 ORTHO05D004015 3.7e-06 55.5 74 44.6
ATR0751G119 Amborella trichopoda HOM05D003409 ORTHO05D004015 4.9e-06 55.1 74 45.9
arahy.Tifrunner.gnm1.ann1.K9VFVK Arachis hypogaea HOM05D003409 ORTHO05D004015 4.9e-06 55.1 74 45.9
arahy.Tifrunner.gnm1.ann1.PKXG4Q Arachis hypogaea HOM05D003409 ORTHO05D004015 4.9e-06 55.1 74 45.9
Lj6g0020357 Lotus japonicus HOM05D003409 ORTHO05D004015 4.9e-06 55.1 74 45.9
Manes.11G044000 Manihot esculenta HOM05D003409 ORTHO05D004015 4.9e-06 55.1 74 44.6
Nn4g24629 Nelumbo nucifera HOM05D003409 ORTHO05D004015 4.9e-06 55.1 74 45.9
Hund01871 Selenicereus undatus HOM05D003409 ORTHO05D004015 4.9e-06 55.1 74 43.2
Psat5g165320 Pisum sativum HOM05D003409 ORTHO05D004015 6.4e-06 54.7 145 31.7
Atru.chr2.3736 Acer truncatum HOM05D003409 ORTHO05D004015 8.3e-06 54.3 74 45.9
Atru.chr2.3741 Acer truncatum HOM05D003409 ORTHO05D004015 8.3e-06 54.3 74 45.9
Aqoxy1G01862 Aquilegia oxysepala HOM05D003409 ORTHO05D004015 8.3e-06 54.3 74 45.9
Dinv40878 Davidia involucrata HOM05D003409 ORTHO05D004015 8.3e-06 54.3 73 46.6
Lalb_Chr20g0114091 Lupinus albus HOM05D003409 ORTHO05D004015 8.3e-06 54.3 75 44.0
PSO210G2179 Papaver somniferum HOM05D003409 ORTHO05D004015 8.3e-06 54.3 74 44.6
PSO210G5345 Papaver somniferum HOM05D003409 ORTHO05D004015 8.3e-06 54.3 74 44.6
Sed0016663 Sechium edule HOM05D003409 ORTHO05D004015 8.3e-06 54.3 74 44.6


User provided reference genes

Program Settings