Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024424 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 5.0e-235 817.4 408 100.0
CSS0038489 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 8.2e-230 800.0 408 98.0
Actinidia20926 Actinidia chinensis HOM05D005745 ORTHO05D006857 4.3e-186 654.8 427 78.2
Actinidia10034 Actinidia chinensis HOM05D005745 ORTHO05D006857 2.8e-185 652.1 432 77.5
Dinv43791 Davidia involucrata HOM05D005745 ORTHO05D006857 5.8e-175 617.8 406 77.1
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla HOM05D005745 ORTHO05D006857 4.3e-170 601.7 415 71.6
vmacro13297 Vaccinium macrocarpon HOM05D005745 ORTHO05D006857 4.7e-169 598.2 440 72.7
GSVIVG01026870001 Vitis vinifera HOM05D005745 ORTHO05D006857 2.0e-159 566.2 450 64.7
Rhsim07G0017300 Rhododendron simsii HOM05D000683 ORTHO05D000507 9.9e-159 563.9 426 70.4
TAR367G0002 Trochodendron aralioides HOM05D005745 ORTHO05D006857 4.3e-154 548.5 433 67.0
QL08p049437 Quercus lobata HOM05D005745 ORTHO05D006857 4.0e-152 542.0 415 67.2
Manes.01G259400 Manihot esculenta HOM05D005745 ORTHO05D006857 4.9e-150 535.0 420 64.8
Gohir.D12G109300 Gossypium hirsutum HOM05D005745 ORTHO05D006857 4.6e-148 528.5 390 66.7
Gorai.008G118400 Gossypium raimondii HOM05D005745 ORTHO05D006857 2.3e-147 526.2 390 66.7
Gohir.A12G105400 Gossypium hirsutum HOM05D005745 ORTHO05D006857 3.3e-146 522.3 390 66.2
Cpa.g.sc18.234 Carica papaya HOM05D005745 ORTHO05D006857 2.8e-145 519.2 423 62.2
FAN10G4182 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.4e-144 516.9 391 66.0
FAN06G1549 Fragaria x ananassa HOM05D005745 ORTHO05D006857 4.0e-144 515.4 396 64.9
MD01G1055100 Malus domestica HOM05D005745 ORTHO05D006857 4.0e-144 515.4 420 63.1
Sabra14G0059300 Salix brachista HOM05D005745 ORTHO05D006857 6.9e-144 514.6 433 62.1
MSTRG.17255 Avicennia marina HOM05D005745 ORTHO05D006857 6.4e-142 508.1 430 59.8
CiPaw.02G029400 Carya illinoinensis HOM05D005745 ORTHO05D006857 8.4e-142 507.7 412 63.6
VMungo0331G1900 Vigna mungo HOM05D005745 ORTHO05D006857 1.9e-141 506.5 407 63.6
Cc02_g37770 Coffea canephora HOM05D005745 ORTHO05D006857 2.5e-141 506.1 406 64.0
Nn6g33496 Nelumbo nucifera HOM05D005745 ORTHO05D006857 3.2e-141 505.8 412 64.1
Medtr8g031440 Medicago truncatula HOM05D005745 ORTHO05D006857 9.3e-141 504.2 391 64.5
Lj3g0021692 Lotus japonicus HOM05D005745 ORTHO05D006857 1.6e-140 503.4 399 64.9
DCAR_015932 Daucus carota HOM05D005745 ORTHO05D006857 3.5e-140 502.3 412 64.1
Oeu056358.1 Olea europaea HOM05D005745 ORTHO05D006857 6.7e-139 498.0 381 66.4
SGA_v2.0_scaffold277G46666 Striga asiatica HOM05D005745 ORTHO05D006857 8.7e-139 497.7 423 61.9
PSO782G5186 Papaver somniferum HOM05D005745 ORTHO05D006857 2.5e-138 496.1 437 59.5
Solyc05g048810.4 Solanum lycopersicum HOM05D005745 ORTHO05D006857 2.5e-138 496.1 424 61.3
Sopen05g028140 Solanum pennellii HOM05D005745 ORTHO05D006857 3.3e-138 495.7 424 61.3
Cfa003949 Carpinus fangiana HOM05D000683 ORTHO05D000507 4.3e-138 495.4 392 65.1
Ciclev10020429m.g Citrus clementina HOM05D005745 ORTHO05D006857 9.6e-138 494.2 406 62.6
PGSC0003DMG400021653 Solanum tuberosum HOM05D005745 ORTHO05D006857 9.6e-138 494.2 424 60.6
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea HOM05D005745 ORTHO05D006857 4.8e-137 491.9 412 61.7
CAN.G1535.1 Capsicum annuum HOM05D005745 ORTHO05D006857 4.8e-137 491.9 424 60.4
Aqoxy7G00357 Aquilegia oxysepala HOM05D005745 ORTHO05D006857 1.8e-136 490.0 413 60.3
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea HOM05D005745 ORTHO05D006857 5.3e-136 488.4 403 62.3
PSO478G4474 Papaver somniferum HOM05D005745 ORTHO05D006857 2.0e-135 486.5 437 57.0
Haze_15472 Corylus avellana HOM05D005745 ORTHO05D006857 3.4e-135 485.7 412 61.7
TWI23G0914 Tripterygium wilfordii HOM05D005745 ORTHO05D006857 3.4e-135 485.7 452 56.9
CARHR000560 Cardamine hirsuta HOM05D005745 ORTHO05D006857 1.0e-134 484.2 410 60.0
CANSAT56G0536 Cannabis sativa HOM05D005745 ORTHO05D006857 2.9e-134 482.6 426 59.6
EL10Ac1g00543 Beta vulgaris HOM05D005745 ORTHO05D006857 4.9e-134 481.9 413 59.6
ECA236G3051 Erigeron canadensis HOM05D005745 ORTHO05D006857 6.5e-134 481.5 417 60.4
Lj7C516G5 Lonicera japonica HOM05D005745 ORTHO05D006857 8.4e-134 481.1 382 66.0
Lalb_Chr04g0256771 Lupinus albus HOM05D005745 ORTHO05D006857 8.4e-134 481.1 418 60.0
Peaxi162Scf00191g01322 Petunia axillaris HOM05D005745 ORTHO05D006857 1.9e-133 479.9 413 60.3
Lsat_1_v5_gn_7_5060 Lactuca sativa HOM05D005745 ORTHO05D006857 4.2e-133 478.8 424 60.6
Nitab4.5_0007346g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 5.5e-133 478.4 447 57.7
AUR62033312 Chenopodium quinoa HOM05D005745 ORTHO05D006857 5.1e-131 471.9 413 58.4
Sc26g0000960 Simmondsia chinensis HOM05D005745 ORTHO05D006857 6.7e-131 471.5 405 60.7
CsaV3_6G000430 Cucumis sativus L. HOM05D005745 ORTHO05D006857 1.1e-130 470.7 400 60.5
BcaB03g13612 Brassica carinata HOM05D005745 ORTHO05D006857 4.3e-130 468.8 407 60.0
Lalb_Chr10g0097191 Lupinus albus HOM05D005745 ORTHO05D006857 4.3e-130 468.8 400 60.2
AUR62033347 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.3e-129 467.2 412 57.8
PGR042G0923 Punica granatum HOM05D005745 ORTHO05D006857 1.3e-129 467.2 427 60.4
CiPaw.02G029100 Carya illinoinensis HOM05D005745 ORTHO05D006857 1.6e-129 466.8 415 60.0
Hund27291 Selenicereus undatus HOM05D005745 ORTHO05D006857 1.6e-129 466.8 429 58.0
Thhalv10007725m.g Eutrema salsugineum HOM05D005745 ORTHO05D006857 2.2e-129 466.5 411 59.9
Duzib138G1514 Durio zibethinus HOM05D005745 ORTHO05D006857 2.4e-128 463.0 346 68.2
AL1G10580 Arabidopsis lyrata HOM05D005745 ORTHO05D006857 3.1e-128 462.6 421 58.0
Aa31LG1G11130 Aethionema arabicum HOM05D005745 ORTHO05D006857 1.5e-127 460.3 439 54.9
A10p00280 Brassica napus HOM05D005745 ORTHO05D006857 1.5e-127 460.3 411 58.6
Eucgr.E00173 Eucalyptus grandis HOM05D005745 ORTHO05D006857 5.0e-126 455.3 414 59.9
Ca_23656_v3 Cicer arietinum L. HOM05D005745 ORTHO05D006857 6.5e-126 454.9 356 64.0
Eucgr.E00169 Eucalyptus grandis HOM05D005745 ORTHO05D006857 3.2e-125 452.6 433 58.2
Carub.0001s0045 Capsella rubella HOM05D005745 ORTHO05D006857 4.2e-125 452.2 412 58.3
Sp1g00540 Schrenkiella parvula HOM05D005745 ORTHO05D006857 9.4e-125 451.1 429 55.5
BraA10t42305Z Brassica rapa HOM05D005745 ORTHO05D006857 2.3e-123 446.4 433 56.1
BolC5t28819H Brassica oleracea HOM05D005745 ORTHO05D006857 1.1e-122 444.1 420 57.1
Potri.014G081400 Populus trichocarpa HOM05D005745 ORTHO05D006857 3.3e-122 442.6 368 62.8
ClCG06G003860 Citrullus lanatus HOM05D005745 ORTHO05D006857 7.4e-122 441.4 465 52.5
C05p00290 Brassica napus HOM05D005745 ORTHO05D006857 8.2e-121 438.0 435 54.5
Gohir.A12G105450 Gossypium hirsutum HOM05D005745 ORTHO05D006857 4.1e-120 435.6 329 65.3
HanXRQChr04g0121611 Helianthus annuus HOM05D005745 ORTHO05D006857 4.5e-119 432.2 357 63.0
AUR62004330 Chenopodium quinoa HOM05D005745 ORTHO05D006857 5.9e-119 431.8 410 55.4
THA.LOC104817020 Tarenaya hassleriana HOM05D005745 ORTHO05D006857 1.0e-118 431.0 386 57.0
AT1G01760 Arabidopsis thaliana HOM05D005745 ORTHO05D006857 1.7e-118 430.3 389 59.1
MBI17_g21972_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 1.7e-118 430.3 384 59.9
FAN03G1898 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.1e-117 427.6 388 57.7
Ah.05g176680 Amaranthus hybridus HOM05D005745 ORTHO05D006857 8.8e-115 417.9 370 60.0
Sed0009525 Sechium edule HOM05D005745 ORTHO05D006857 4.8e-113 412.1 344 63.1
RcHm_v2.0_Chr1g0354081 Rosa chinensis HOM05D005745 ORTHO05D006857 3.1e-112 409.5 441 52.4
Nitab4.5_0002262g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 1.4e-109 400.6 403 54.8
CiPaw.02G029200 Carya illinoinensis HOM05D005745 ORTHO05D006857 2.1e-108 396.7 353 59.8
MBI18_g01486_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 4.7e-108 395.6 398 55.5
Prupe.2G164800 Prunus persica HOM05D005745 ORTHO05D006857 1.8e-107 393.7 330 61.5
FvH4_7g13861 Fragaria vesca HOM05D005745 ORTHO05D006857 7.4e-106 388.3 313 62.9
HPP92_001499 Vanilla planifolia HOM05D005745 ORTHO05D006857 1.0e-102 377.9 375 53.9
Glyma.07G073300 Glycine max HOM05D005745 ORTHO05D006857 1.7e-97 360.5 306 62.1
Zm00001eb067600 Zea mays HOM05D005745 ORTHO05D006857 1.1e-93 347.8 407 48.4
Phvul.010G096200 Phaseolus vulgaris HOM05D005745 ORTHO05D006857 4.7e-92 342.4 256 66.0
CDE06G1611 Ceratophyllum demersum HOM05D005745 ORTHO05D006857 2.6e-90 336.7 409 47.9
MELO3C021221.2 Cucumis melo HOM05D005745 ORTHO05D006857 2.8e-89 333.2 387 50.6
Psat4g154320 Pisum sativum HOM05D005745 ORTHO05D006857 4.8e-89 332.4 256 64.1
TPR.G39633 Trifolium pratense HOM05D005745 ORTHO05D006857 3.3e-85 319.7 227 68.3
FAN06G0933 Fragaria x ananassa HOM05D005745 ORTHO05D006857 8.9e-83 311.6 272 59.6
Atru.BG.56.p Acer truncatum HOM05D005745 ORTHO05D006857 1.4e-80 304.3 325 53.5
Mapoly0023s0060 Marchantia polymorpha HOM05D005745 ORTHO05D006857 7.8e-79 298.5 534 36.1
Prupe.2G165000 Prunus persica HOM05D005745 ORTHO05D006857 6.1e-76 288.9 408 45.3
Thecc.01G362500 Theobroma cacao HOM05D005745 ORTHO05D006857 1.1e-72 278.1 250 62.0
Glyma.03G013600 Glycine max HOM05D005745 ORTHO05D006857 1.3e-70 271.2 256 57.4
Pp3c4_14060 Physcomitrium patens HOM05D005745 ORTHO05D006857 3.0e-70 270.0 515 34.8
AagrBONN_evm.TU.Sc2ySwM_362.160 Anthoceros agrestis HOM05D005745 ORTHO05D006857 4.7e-68 262.7 420 38.1
Os04g0683500 Oryza sativa ssp. japonica HOM05D005745 ORTHO05D006857 8.0e-68 261.9 308 48.7
AUR62003100 Chenopodium quinoa HOM05D005745 ORTHO05D006857 2.9e-65 253.4 182 65.4
AUR62034353 Chenopodium quinoa HOM05D005745 ORTHO05D006857 6.4e-65 252.3 191 62.8
ATR0594G105 Amborella trichopoda HOM05D005745 ORTHO05D006857 3.2e-64 250.0 221 56.6
Zm00001eb420790 Zea mays HOM05D005745 ORTHO05D006857 1.9e-61 240.7 249 49.8
SHI13462 Sapria himalayana HOM05D005745 ORTHO05D006857 2.8e-60 236.9 432 39.8
unitig_26.g9734 Utricularia gibba HOM05D005745 ORTHO05D006857 3.4e-58 229.9 332 42.8
MD07G1140200 Malus domestica HOM05D005745 ORTHO05D006857 8.3e-57 225.3 302 46.0
Oeu056357.1 Olea europaea HOM05D005745 ORTHO05D006857 2.7e-55 220.3 185 63.8
Zm00001eb191880 Zea mays HOM05D009386 ORTHO05D006857 6.4e-49 199.1 185 55.1
TPR.G4413 Trifolium pratense HOM05D005745 ORTHO05D006857 1.1e-48 198.4 164 62.8
SMO266G0032 Selaginella moellendorffii HOM05D005745 ORTHO05D006857 1.3e-44 184.9 254 42.1
SEGI_32011 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 1.2e-42 178.3 194 47.9
AUR62034238 Chenopodium quinoa HOM05D002177 ORTHO05D002257 4.0e-35 153.3 111 63.1
Prupe.2G164500 Prunus persica HOM05D005745 ORTHO05D006857 2.6e-34 150.6 143 58.0
MCO02G004 Micromonas commoda HOM05D005745 ORTHO05D006857 5.8e-34 149.4 427 31.1
AUR62019766 Chenopodium quinoa HOM05D005745 ORTHO05D006857 2.2e-33 147.5 111 59.5
Atru.chr5.475 Acer truncatum HOM05D005745 ORTHO05D006857 3.2e-32 143.7 89 76.4
SEGI_32349 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 2.1e-31 141.0 391 27.6
Zm00001eb442120 Zea mays HOM05D009386 ORTHO05D006857 2.7e-31 140.6 125 53.6
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 1.8e-30 137.9 818 21.9
Glyma.03G013550 Glycine max HOM05D005745 ORTHO05D006857 1.3e-28 131.7 93 68.8
Oeu056356.1 Olea europaea HOM05D005745 ORTHO05D006857 2.8e-28 130.6 101 70.3
FAN01G0854 Fragaria x ananassa HOM05D005745 ORTHO05D006857 4.0e-27 126.7 152 48.7
EL10Ac7g17708 Beta vulgaris HOM05D005745 ORTHO05D006857 3.4e-26 123.6 86 73.3
PRCOL_00000230 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 3.8e-25 120.2 436 26.1
COL.COLO4_12683 Corchorus olitorius HOM05D000683 ORTHO05D000507 3.2e-24 117.1 135 49.6
MCO14G396 Micromonas commoda HOM05D005745 ORTHO05D006857 3.5e-15 87.0 236 29.7
Cre14.g629283 Chlamydomonas reinhardtii HOM05D005745 ORTHO05D006857 1.0e-14 85.5 96 51.0
MCO15G493 Micromonas commoda HOM05D005745 ORTHO05D006857 6.3e-12 76.3 328 25.0
MD07G1140100 Malus domestica HOM05D005745 ORTHO05D006857 2.6e-10 70.9 62 56.5
PRCOL_00001873 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 1.7e-09 68.2 270 25.9
ATR0594G209 Amborella trichopoda HOM05D005745 ORTHO05D006857 1.6e-07 61.6 34 82.4
Actinidia27239 Actinidia chinensis HOM05D005745 ORTHO05D006857 3.0e-06 57.4 66 48.5


User provided reference genes

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