Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024113 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D028393 3.7e-28 127.5 63 100.0
CSS0034299 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D005558 6.0e-23 110.2 57 94.7
vmacro10993 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 1.0e-22 109.4 57 94.7
Rhsim02G0165800 Rhododendron simsii HOM05D004135 ORTHO05D005558 2.3e-22 108.2 57 93.0
Peaxi162Scf00195g00518 Petunia axillaris HOM05D004135 ORTHO05D005558 3.3e-21 104.4 57 87.7
Nitab4.5_0001219g0030 Nicotiana tabacum HOM05D004135 ORTHO05D005558 4.3e-21 104.0 57 86.0
Nitab4.5_0012414g0010 Nicotiana tabacum HOM05D004135 ORTHO05D005558 4.3e-21 104.0 57 86.0
Actinidia25200 Actinidia chinensis HOM05D004135 ORTHO05D005558 5.7e-21 103.6 57 87.7
Actinidia32352 Actinidia chinensis HOM05D004135 ORTHO05D005558 5.7e-21 103.6 57 87.7
Lj1A1156T44 Lonicera japonica HOM05D004135 ORTHO05D005558 9.6e-21 102.8 60 81.7
CAN.G675.30 Capsicum annuum HOM05D004135 ORTHO05D005558 1.3e-20 102.4 57 86.0
CiPaw.09G148400 Carya illinoinensis HOM05D004135 ORTHO05D005558 2.1e-20 101.7 57 84.2
Eucgr.D01026 Eucalyptus grandis HOM05D004135 ORTHO05D005558 2.1e-20 101.7 57 84.2
Lsat_1_v5_gn_1_86700 Lactuca sativa HOM05D004135 ORTHO05D005558 2.1e-20 101.7 55 85.5
Sopen02g018720 Solanum pennellii HOM05D004135 ORTHO05D005558 2.1e-20 101.7 57 86.0
Manes.14G126900 Manihot esculenta HOM05D004135 ORTHO05D005558 3.7e-20 100.9 57 84.2
CsaV3_6G052670 Cucumis sativus L. HOM05D004135 ORTHO05D005558 4.8e-20 100.5 57 82.5
MSTRG.16319 Avicennia marina HOM05D004135 ORTHO05D005558 6.3e-20 100.1 57 84.2
MELO3C007042.2 Cucumis melo HOM05D004135 ORTHO05D005558 6.3e-20 100.1 57 82.5
Hma1.2p1_0300F.1_g117980 Hydrangea macrophylla HOM05D004135 ORTHO05D005558 6.3e-20 100.1 57 86.0
Solyc02g069585.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 6.3e-20 100.1 57 84.2
Cpa.g.sc285.5 Carica papaya HOM05D004135 ORTHO05D005558 8.2e-20 99.8 57 84.2
Oeu060331.1 Olea europaea HOM05D004135 ORTHO05D005558 1.1e-19 99.4 57 86.0
PGSC0003DMG400021137 Solanum tuberosum HOM05D004135 ORTHO05D005558 1.1e-19 99.4 57 84.2
SGA_v2.0_scaffold298G47640 Striga asiatica HOM05D004135 ORTHO05D005558 1.1e-19 99.4 57 84.2
ClCG01G025420 Citrullus lanatus HOM05D004135 ORTHO05D005558 1.4e-19 99.0 57 80.7
Sed0006315 Sechium edule HOM05D004135 ORTHO05D005558 1.4e-19 99.0 57 80.7
Lj2A337T32 Lonicera japonica HOM05D004135 ORTHO05D005558 1.8e-19 98.6 57 84.2
QL05p064858 Quercus lobata HOM05D004135 ORTHO05D005558 1.8e-19 98.6 56 83.9
Sed0027064 Sechium edule HOM05D004135 ORTHO05D005558 1.8e-19 98.6 57 80.7
MSTRG.7569 Avicennia marina HOM05D004135 ORTHO05D005558 2.4e-19 98.2 57 82.5
Migut.M01941 Erythranthe guttata HOM05D004135 ORTHO05D005558 2.4e-19 98.2 57 80.7
GSVIVG01021747001 Vitis vinifera HOM05D004135 ORTHO05D005558 2.4e-19 98.2 57 84.2
RcHm_v2.0_Chr5g0018341 Rosa chinensis HOM05D004135 ORTHO05D005558 3.1e-19 97.8 57 80.7
Aqoxy6G00202 Aquilegia oxysepala HOM05D004135 ORTHO05D005558 6.9e-19 96.7 57 78.9
Cfa000762 Carpinus fangiana HOM05D004135 ORTHO05D005558 6.9e-19 96.7 57 80.7
HanXRQChr11g0340901 Helianthus annuus HOM05D004135 ORTHO05D005558 6.9e-19 96.7 55 81.8
TAR627G0684 Trochodendron aralioides HOM05D004135 ORTHO05D005558 6.9e-19 96.7 57 78.9
Potri.011G155800 Populus trichocarpa HOM05D004135 ORTHO05D005558 9.0e-19 96.3 57 78.9
Sabra11G0144000 Salix brachista HOM05D004135 ORTHO05D005558 9.0e-19 96.3 57 78.9
TAR629G2923 Trochodendron aralioides HOM05D004135 ORTHO05D005558 9.0e-19 96.3 57 80.7
Duzib160G0522 Durio zibethinus HOM05D004135 ORTHO05D005558 1.5e-18 95.5 57 78.9
Duzib235G1539 Durio zibethinus HOM05D004135 ORTHO05D005558 1.5e-18 95.5 57 78.9
Gohir.A05G111900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.5e-18 95.5 57 78.9
Gohir.D05G112400 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.5e-18 95.5 57 78.9
Gorai.009G116600 Gossypium raimondii HOM05D004135 ORTHO05D005558 1.5e-18 95.5 57 78.9
Thecc.06G007700 Theobroma cacao HOM05D004135 ORTHO05D005558 1.5e-18 95.5 57 78.9
TWI15G0841 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 1.5e-18 95.5 57 80.7
unitig_748.g7354 Utricularia gibba HOM05D004135 ORTHO05D005558 1.5e-18 95.5 57 75.4
THA.LOC104798582 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 2.0e-18 95.1 57 78.9
CANSAT35G0477 Cannabis sativa HOM05D004135 ORTHO05D005558 2.6e-18 94.7 57 75.4
Os04g0612600 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 2.6e-18 94.7 57 75.4
Ciclev10016127m.g Citrus clementina HOM05D004135 ORTHO05D005558 3.4e-18 94.4 57 77.2
PSO541G2415 Papaver somniferum HOM05D004135 ORTHO05D005558 3.4e-18 94.4 57 78.9
PSO675G0864 Papaver somniferum HOM05D004135 ORTHO05D005558 3.4e-18 94.4 57 78.9
Sopen02g009560 Solanum pennellii HOM05D004135 ORTHO05D005558 3.4e-18 94.4 56 80.4
Haze_05958 Corylus avellana HOM05D006556 ORTHO05D008146 4.5e-18 94.0 53 83.0
Gohir.A02G088700 Gossypium hirsutum HOM05D004135 ORTHO05D005558 4.5e-18 94.0 57 77.2
Gorai.005G119100 Gossypium raimondii HOM05D004135 ORTHO05D005558 4.5e-18 94.0 57 77.2
PGR083G2348 Punica granatum HOM05D004135 ORTHO05D005558 4.5e-18 94.0 56 78.6
BcaB07g32703 Brassica carinata HOM05D004135 ORTHO05D005558 5.9e-18 93.6 57 73.7
COL.COLO4_26892 Corchorus olitorius HOM05D004135 ORTHO05D005558 5.9e-18 93.6 57 75.4
AT1G30630 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 1.0e-17 92.8 57 75.4
BraA04t18166Z Brassica rapa HOM05D004135 ORTHO05D005558 1.0e-17 92.8 57 75.4
Gohir.D02G104900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.0e-17 92.8 57 75.4
SalBow8G1631 Salvia bowleyana HOM05D004135 ORTHO05D005558 1.0e-17 92.8 57 78.9
SalBow8G2729 Salvia bowleyana HOM05D004135 ORTHO05D005558 1.0e-17 92.8 57 78.9
Sp4g17120 Schrenkiella parvula HOM05D004135 ORTHO05D005558 1.0e-17 92.8 57 75.4
arahy.Tifrunner.gnm1.ann1.CJHC7K Arachis hypogaea HOM05D004135 ORTHO05D005558 1.3e-17 92.4 60 71.7
DCAR_007807 Daucus carota HOM05D004135 ORTHO05D005558 1.3e-17 92.4 56 76.8
Thhalv10008349m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 1.3e-17 92.4 57 75.4
Nn4g26687 Nelumbo nucifera HOM05D004135 ORTHO05D005558 1.3e-17 92.4 57 78.9
Aa31LG10G6460 Aethionema arabicum HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 75.4
Aa31LG6G11870 Aethionema arabicum HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 75.4
BcaC01g05751 Brassica carinata HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 75.4
BcaC05g27087 Brassica carinata HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 73.7
A03p19330 Brassica napus HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 75.4
A09p35780 Brassica napus HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 73.7
C03p22580 Brassica napus HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 75.4
C05p29690 Brassica napus HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 73.7
BolC3t14655H Brassica oleracea HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 75.4
BolC5t31698H Brassica oleracea HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 73.7
BraA03t11189Z Brassica rapa HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 75.4
BraA09t39101Z Brassica rapa HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 73.7
CDE02G1412 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 75.4
Thhalv10017028m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 77.2
FvH4_3g11400 Fragaria vesca HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 75.4
FAN16G1287 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 75.4
FAN25G0882 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 75.4
Manes.06G053900 Manihot esculenta HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 77.2
Prupe.4G101800 Prunus persica HOM05D004135 ORTHO05D005558 1.7e-17 92.0 57 75.4
PGSC0003DMG400031401 Solanum tuberosum HOM05D004135 ORTHO05D005558 1.7e-17 92.0 56 78.6
BcaB06g28829 Brassica carinata HOM05D004135 ORTHO05D005558 2.2e-17 91.7 57 73.7
C04p64030 Brassica napus HOM05D004135 ORTHO05D005558 2.2e-17 91.7 57 73.7
FAN21G1456 Fragaria x ananassa HOM05D004135 ORTHO05D005558 2.2e-17 91.7 57 73.7
Solyc02g030243.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 2.2e-17 91.7 56 78.6
THA.LOC104814339 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 2.2e-17 91.7 57 75.4
AL1G44690 Arabidopsis lyrata HOM05D004135 ORTHO05D005558 2.9e-17 91.3 57 73.7
A04p26610 Brassica napus HOM05D004135 ORTHO05D005558 2.9e-17 91.3 57 73.7
Carub.0001s2889 Capsella rubella HOM05D004135 ORTHO05D005558 2.9e-17 91.3 57 73.7
Ca_00931_v3 Cicer arietinum L. HOM05D004135 ORTHO05D005558 2.9e-17 91.3 57 73.7
TPR.G8030 Trifolium pratense HOM05D004135 ORTHO05D005558 2.9e-17 91.3 57 73.7
DCAR_003828 Daucus carota HOM05D004135 ORTHO05D005558 3.8e-17 90.9 56 76.8
Nn7g38349 Nelumbo nucifera HOM05D004135 ORTHO05D005558 3.8e-17 90.9 57 78.9
Sp1g26530 Schrenkiella parvula HOM05D004135 ORTHO05D005558 3.8e-17 90.9 57 73.7
AT2G34840 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 5.0e-17 90.5 57 75.4
Zm00001eb430730 Zea mays HOM05D004135 ORTHO05D005558 5.0e-17 90.5 57 70.2
BcaC02g07752 Brassica carinata HOM05D004135 ORTHO05D005558 6.5e-17 90.1 57 73.7
Lsat_1_v5_gn_7_31180 Lactuca sativa HOM05D004135 ORTHO05D005558 6.5e-17 90.1 57 75.4
Lj6g0020585 Lotus japonicus HOM05D004135 ORTHO05D005558 6.5e-17 90.1 57 73.7
Os04g0644700 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 6.5e-17 90.1 57 77.2
Sc24g0002580 Simmondsia chinensis HOM05D004135 ORTHO05D005558 6.5e-17 90.1 57 75.4
Carub.0004s1652 Capsella rubella HOM05D004135 ORTHO05D005558 8.5e-17 89.7 57 71.9
Medtr2g032130 Medicago truncatula HOM05D004135 ORTHO05D005558 8.5e-17 89.7 57 73.7
TWI38G0133 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 8.5e-17 89.7 57 77.2
MBI18_g26296_MAGBIO Magnolia biondii HOM05D004135 ORTHO05D005558 1.1e-16 89.4 56 73.2
ATR0763G246 Amborella trichopoda HOM05D004135 ORTHO05D005558 1.9e-16 88.6 57 73.7
vmacro03457 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 1.9e-16 88.6 57 75.4
BolC4t27879H Brassica oleracea HOM05D004135 ORTHO05D005558 2.5e-16 88.2 57 71.9
Glyma.15G136100 Glycine max HOM05D004135 ORTHO05D005558 2.5e-16 88.2 56 71.4
HanXRQChr04g0119201 Helianthus annuus HOM05D004135 ORTHO05D005558 3.2e-16 87.8 57 73.7
Glyma.09G030400 Glycine max HOM05D004135 ORTHO05D005558 4.2e-16 87.4 56 69.6
Phvul.006G122500 Phaseolus vulgaris HOM05D004135 ORTHO05D005558 5.5e-16 87.0 56 71.4
TWI81G0788 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 5.5e-16 87.0 55 78.2
HPP92_013200 Vanilla planifolia HOM05D004135 ORTHO05D005558 5.5e-16 87.0 57 71.9
Zm00001eb432010 Zea mays HOM05D004135 ORTHO05D005558 5.5e-16 87.0 57 73.7
CARHR030110 Cardamine hirsuta HOM05D004135 ORTHO05D005558 7.2e-16 86.7 57 71.9
AagrBONN_evm.TU.Sc2ySwM_117.3836 Anthoceros agrestis HOM05D004135 ORTHO05D005558 2.1e-15 85.1 57 64.9
Lalb_Chr20g0120301 Lupinus albus HOM05D004135 ORTHO05D005558 2.1e-15 85.1 57 70.2
VMungo0540G1545 Vigna mungo HOM05D004135 ORTHO05D005558 2.7e-15 84.7 56 69.6
MD10G1241400 Malus domestica HOM05D004135 ORTHO05D005558 3.6e-15 84.3 51 76.5
Zm00001eb274480 Zea mays HOM05D004135 ORTHO05D005558 4.6e-15 84.0 57 70.2
Atru.chr6.3256 Acer truncatum HOM05D004135 ORTHO05D005558 6.1e-15 83.6 56 71.4
Ah.11g045310 Amaranthus hybridus HOM05D004135 ORTHO05D005558 7.9e-15 83.2 57 64.9
AUR62027344 Chenopodium quinoa HOM05D004135 ORTHO05D005558 7.9e-15 83.2 57 64.9
EL10Ac8g19524 Beta vulgaris HOM05D004135 ORTHO05D005558 3.0e-14 81.3 57 64.9
ECA236G2122 Erigeron canadensis HOM05D000091 ORTHO05D001510 3.9e-14 80.9 57 64.9
Pp3c6_18240 Physcomitrium patens HOM05D004135 ORTHO05D005558 3.9e-14 80.9 57 61.4
AUR62042515 Chenopodium quinoa HOM05D004135 ORTHO05D005558 6.7e-14 80.1 57 63.2
MD05G1263700 Malus domestica HOM05D004135 ORTHO05D005558 1.1e-13 79.3 54 66.7
RcHm_v2.0_Chr6g0289621 Rosa chinensis HOM05D004135 ORTHO05D028393 1.5e-13 79.0 57 66.7
Mapoly0002s0056 Marchantia polymorpha HOM05D004135 ORTHO05D005558 1.9e-13 78.6 53 58.5
Pp3c27_2170 Physcomitrium patens HOM05D004135 ORTHO05D005558 2.5e-13 78.2 57 57.9
Pp3c16_16890 Physcomitrium patens HOM05D004135 ORTHO05D005558 4.3e-13 77.4 57 56.1
Zm00001eb180170 Zea mays HOM05D004135 ORTHO05D444922 4.3e-13 77.4 55 70.9
RcHm_v2.0_Chr0c29g0501101 Rosa chinensis HOM05D004135 ORTHO05D028393 2.6e-10 68.2 45 66.7
RcHm_v2.0_Chr1g0337861 Rosa chinensis HOM05D004135 ORTHO05D028393 2.6e-10 68.2 45 66.7
CBR_g34668 Chara braunii HOM05D004135 ORTHO05D005558 1.2e-07 59.3 56 53.6
Haze_08569 Corylus avellana HOM05D004135 ORTHO05D005558 1.2e-07 59.3 36 77.8
PRCOL_00001868 Prasinoderma coloniale HOM05D004135 ORTHO05D005558 1.2e-07 59.3 54 53.7
SMO358G0532 Selaginella moellendorffii HOM05D004135 ORTHO05D005558 2.7e-07 58.2 56 46.4
MCO11G236 Micromonas commoda HOM05D004135 ORTHO05D005558 3.6e-07 57.8 51 51.0
Cre13.g592450 Chlamydomonas reinhardtii HOM05D004135 ORTHO05D005558 1.4e-06 55.8 57 47.4


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