Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022605 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 1.8e-72 275.8 137 100.0
CSS0019305 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 1.3e-33 146.7 109 69.7
CSS0008831 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 2.0e-31 139.4 97 72.2
CSS0026603 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 2.0e-31 139.4 97 72.2
CSS0017614 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 5.9e-31 137.9 100 70.0
QL03p052624 Quercus lobata HOM05D006443 ORTHO05D007797 2.1e-28 129.4 97 67.0
Cpa.g.sc43.60 Carica papaya HOM05D006443 ORTHO05D007797 2.7e-28 129.0 97 67.0
PSO017G6191 Papaver somniferum HOM05D006443 ORTHO05D007797 2.7e-28 129.0 97 69.1
PSO478G2155 Papaver somniferum HOM05D006443 ORTHO05D007797 2.7e-28 129.0 97 69.1
Actinidia30647 Actinidia chinensis HOM05D006443 ORTHO05D007797 3.6e-28 128.6 97 68.0
Thecc.02G208000 Theobroma cacao HOM05D006443 ORTHO05D007797 3.6e-28 128.6 97 68.0
TAR629G0791 Trochodendron aralioides HOM05D006443 ORTHO05D007797 3.6e-28 128.6 97 69.1
Prupe.1G225500 Prunus persica HOM05D006443 ORTHO05D007797 4.7e-28 128.3 97 64.9
EL10Ac6g13506 Beta vulgaris HOM05D006443 ORTHO05D007797 6.1e-28 127.9 97 63.9
Cfa009372 Carpinus fangiana HOM05D006443 ORTHO05D007797 6.1e-28 127.9 97 67.0
Ciclev10031911m.g Citrus clementina HOM05D006443 ORTHO05D007797 6.1e-28 127.9 97 67.0
MELO3C011863.2 Cucumis melo HOM05D006443 ORTHO05D007797 6.1e-28 127.9 97 66.0
CsaV3_5G030250 Cucumis sativus L. HOM05D006443 ORTHO05D007797 6.1e-28 127.9 97 66.0
Gohir.D04G182900 Gossypium hirsutum HOM05D006443 ORTHO05D007797 6.1e-28 127.9 97 67.0
Gorai.012G175900 Gossypium raimondii HOM05D006443 ORTHO05D007797 6.1e-28 127.9 97 67.0
Duzib248G1079 Durio zibethinus HOM05D006443 ORTHO05D007797 8.0e-28 127.5 97 67.0
Eucgr.H04637 Eucalyptus grandis HOM05D006443 ORTHO05D007797 8.0e-28 127.5 97 64.9
Hma1.2p1_0065F.1_g035440 Hydrangea macrophylla HOM05D006443 ORTHO05D007797 8.0e-28 127.5 97 66.0
Hma1.2p1_0065F.1_g035450 Hydrangea macrophylla HOM05D006443 ORTHO05D007797 8.0e-28 127.5 97 66.0
Sabra03G0125800 Salix brachista HOM05D006443 ORTHO05D007797 1.0e-27 127.1 97 64.9
CANSAT01G1158 Cannabis sativa HOM05D006443 ORTHO05D007797 1.4e-27 126.7 97 63.9
Potri.003G171900 Populus trichocarpa HOM05D006443 ORTHO05D007797 1.4e-27 126.7 97 64.9
MD13G1119500 Malus domestica HOM05D006443 ORTHO05D007797 1.8e-27 126.3 97 63.9
PGR119G0512 Punica granatum HOM05D006443 ORTHO05D007797 2.3e-27 125.9 97 66.0
Actinidia08069 Actinidia chinensis HOM05D006443 ORTHO05D007797 3.9e-27 125.2 97 66.0
Haze_12422 Corylus avellana HOM05D006443 ORTHO05D007797 3.9e-27 125.2 97 66.0
Manes.13G011800 Manihot esculenta HOM05D006443 ORTHO05D007797 3.9e-27 125.2 97 64.9
Gohir.A04G139700 Gossypium hirsutum HOM05D006443 ORTHO05D007797 5.2e-27 124.8 97 66.0
MBI11_g05329_MAGBIO Magnolia biondii HOM05D006443 ORTHO05D007797 5.2e-27 124.8 97 66.0
arahy.Tifrunner.gnm1.ann1.DXN1WG Arachis hypogaea HOM05D006443 ORTHO05D007797 6.7e-27 124.4 97 62.9
arahy.Tifrunner.gnm1.ann1.P16M7J Arachis hypogaea HOM05D006443 ORTHO05D007797 6.7e-27 124.4 97 62.9
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 6.7e-27 124.4 97 66.0
Thhalv10008060m.g Eutrema salsugineum HOM05D006443 ORTHO05D007797 6.7e-27 124.4 96 66.7
Glyma.11G250800 Glycine max HOM05D006443 ORTHO05D007797 6.7e-27 124.4 97 64.9
Lj6C827T5 Lonicera japonica HOM05D006443 ORTHO05D007797 8.8e-27 124.0 98 66.3
Atru.chr11.2327 Acer truncatum HOM05D006443 ORTHO05D007797 1.1e-26 123.6 97 66.0
Ca_16457_v3 Cicer arietinum L. HOM05D006443 ORTHO05D007797 1.5e-26 123.2 97 61.9
FAN17G1989 Fragaria x ananassa HOM05D006443 ORTHO05D007797 2.0e-26 122.9 97 62.9
Lsat_1_v5_gn_4_56020 Lactuca sativa HOM05D006443 ORTHO05D007797 2.0e-26 122.9 97 64.9
Sed0000233 Sechium edule HOM05D006443 ORTHO05D007797 2.0e-26 122.9 97 64.9
Aa31LG1G3790 Aethionema arabicum HOM05D006443 ORTHO05D007797 2.6e-26 122.5 97 62.9
FvH4_4g23730 Fragaria vesca HOM05D006443 ORTHO05D007797 2.6e-26 122.5 97 62.9
FAN07G1264 Fragaria x ananassa HOM05D006443 ORTHO05D007797 2.6e-26 122.5 97 62.9
CiPaw.05G109500 Carya illinoinensis HOM05D006443 ORTHO05D007797 3.3e-26 122.1 97 64.9
Glyma.18G006200 Glycine max HOM05D006443 ORTHO05D007797 3.3e-26 122.1 97 62.9
Lalb_Chr11g0075761 Lupinus albus HOM05D006443 ORTHO05D007797 3.3e-26 122.1 97 61.9
Medtr3g085290 Medicago truncatula HOM05D006443 ORTHO05D007797 3.3e-26 122.1 97 62.9
TPR.G17786 Trifolium pratense HOM05D006443 ORTHO05D007797 3.3e-26 122.1 97 61.9
COL.COLO4_20406 Corchorus olitorius HOM05D006443 ORTHO05D007797 4.4e-26 121.7 97 63.9
HanXRQChr08g0207841 Helianthus annuus HOM05D006443 ORTHO05D007797 4.4e-26 121.7 97 64.9
RcHm_v2.0_Chr4g0430211 Rosa chinensis HOM05D006443 ORTHO05D007797 4.4e-26 121.7 97 61.9
BcaC07g41759 Brassica carinata HOM05D006443 ORTHO05D007797 5.7e-26 121.3 96 63.5
A09p64340 Brassica napus HOM05D004937 ORTHO05D007797 5.7e-26 121.3 96 63.5
C08p47970 Brassica napus HOM05D006443 ORTHO05D007797 5.7e-26 121.3 96 63.5
BolC8t52335H Brassica oleracea HOM05D006443 ORTHO05D007797 5.7e-26 121.3 96 63.5
BraA09t41778Z Brassica rapa HOM05D006443 ORTHO05D007797 5.7e-26 121.3 96 63.5
Carub.0001s1145 Capsella rubella HOM05D006443 ORTHO05D007797 5.7e-26 121.3 96 63.5
Psat5g096400 Pisum sativum HOM05D006443 ORTHO05D007797 5.7e-26 121.3 97 61.9
Zm00001eb169540 Zea mays HOM05D006443 ORTHO05D007797 5.7e-26 121.3 97 62.9
Cc11_g16930 Coffea canephora HOM05D006443 ORTHO05D007797 7.4e-26 120.9 97 61.9
Nn4g22309 Nelumbo nucifera HOM05D006443 ORTHO05D007797 7.4e-26 120.9 97 63.9
Hund06091 Selenicereus undatus HOM05D006443 ORTHO05D007797 7.4e-26 120.9 97 63.9
unitig_747.g21126 Utricularia gibba HOM05D006443 ORTHO05D007797 7.4e-26 120.9 97 63.9
CARHR012120 Cardamine hirsuta HOM05D006443 ORTHO05D007797 9.7e-26 120.6 96 63.5
AUR62028926 Chenopodium quinoa HOM05D006443 ORTHO05D007797 9.7e-26 120.6 97 61.9
Migut.K00736 Erythranthe guttata HOM05D006443 ORTHO05D007797 9.7e-26 120.6 97 63.9
AL1G22970 Arabidopsis lyrata HOM05D006443 ORTHO05D007797 1.3e-25 120.2 96 63.5
AT1G11780 Arabidopsis thaliana HOM05D006443 ORTHO05D007797 1.3e-25 120.2 96 63.5
BcaB08g37422 Brassica carinata HOM05D006443 ORTHO05D007797 1.3e-25 120.2 96 63.5
Lj6g0022486 Lotus japonicus HOM05D006443 ORTHO05D007797 1.3e-25 120.2 97 61.9
TWI36G0197 Tripterygium wilfordii HOM05D006443 ORTHO05D007797 1.3e-25 120.2 97 62.9
VMungo1383G0397 Vigna mungo HOM05D006443 ORTHO05D007797 1.3e-25 120.2 97 61.9
GSVIVG01010487001 Vitis vinifera HOM05D006443 ORTHO05D007797 1.3e-25 120.2 97 62.9
Aqoxy5G03367 Aquilegia oxysepala HOM05D006443 ORTHO05D007797 1.7e-25 119.8 97 64.9
Os11g0488500 Oryza sativa ssp. japonica HOM05D006443 ORTHO05D007797 1.7e-25 119.8 97 61.9
CDE05G3615 Ceratophyllum demersum HOM05D006443 ORTHO05D007797 2.2e-25 119.4 97 62.9
Phvul.001G262100 Phaseolus vulgaris HOM05D006443 ORTHO05D007797 2.2e-25 119.4 97 61.9
THA.LOC104807130 Tarenaya hassleriana HOM05D006443 ORTHO05D007797 2.2e-25 119.4 97 62.9
AUR62005622 Chenopodium quinoa HOM05D006443 ORTHO05D007797 2.8e-25 119.0 97 60.8
Sp1g10410 Schrenkiella parvula HOM05D006443 ORTHO05D007797 3.7e-25 118.6 96 62.5
SGA_v2.0_scaffold9G04677 Striga asiatica HOM05D006443 ORTHO05D007797 3.7e-25 118.6 97 62.9
FAN22G2300 Fragaria x ananassa HOM05D006443 ORTHO05D007797 4.8e-25 118.2 97 60.8
MSTRG.502 Avicennia marina HOM05D006443 ORTHO05D007797 6.3e-25 117.9 97 61.9
DCAR_031204 Daucus carota HOM05D006443 ORTHO05D007797 6.3e-25 117.9 117 59.0
Sc14g0009070 Simmondsia chinensis HOM05D006443 ORTHO05D007797 1.4e-24 116.7 97 61.9
Oeu058924.1 Olea europaea HOM05D006443 ORTHO05D007797 4.1e-24 115.2 97 61.9
Peaxi162Scf00359g00713 Petunia axillaris HOM05D006443 ORTHO05D007797 2.6e-23 112.5 97 57.7
SMO196G0120 Selaginella moellendorffii HOM05D006443 ORTHO05D007797 2.6e-23 112.5 97 59.8
ATR0561G191 Amborella trichopoda HOM05D006443 ORTHO05D007797 4.5e-23 111.7 97 58.8
Rhsim12G0099900 Rhododendron simsii HOM05D006443 ORTHO05D007797 4.5e-23 111.7 97 60.8
Solyc04g045590.3 Solanum lycopersicum HOM05D006443 ORTHO05D007797 4.5e-23 111.7 97 56.7
Sopen04g017520 Solanum pennellii HOM05D006443 ORTHO05D007797 4.5e-23 111.7 97 56.7
Nitab4.5_0001356g0010 Nicotiana tabacum HOM05D006443 ORTHO05D007797 7.7e-23 110.9 97 56.7
Nitab4.5_0008905g0010 Nicotiana tabacum HOM05D006443 ORTHO05D007797 7.7e-23 110.9 97 56.7
CAN.G237.4 Capsicum annuum HOM05D006443 ORTHO05D007797 1.0e-22 110.5 97 55.7
Mapoly0036s0054 Marchantia polymorpha HOM05D006443 ORTHO05D007797 2.2e-22 109.4 97 58.8
SEGI_28427 Sequoiadendron giganteum HOM05D006443 ORTHO05D007797 1.1e-21 107.1 97 59.8
Pp3c15_20640 Physcomitrium patens HOM05D006443 ORTHO05D007797 2.3e-19 99.4 97 53.6
AagrBONN_evm.TU.Sc2ySwM_228.5822 Anthoceros agrestis HOM05D006443 ORTHO05D007797 2.6e-18 95.9 99 54.5
CBR_g32330 Chara braunii HOM05D006443 ORTHO05D007797 9.7e-18 94.0 93 51.6
ClCG11G013640 Citrullus lanatus HOM05D006443 ORTHO05D007797 3.8e-14 82.0 44 86.4
Cre06.g278198 Chlamydomonas reinhardtii HOM05D006443 ORTHO05D007797 1.6e-12 76.6 96 40.6
MCO14G547 Micromonas commoda HOM05D006443 ORTHO05D007797 4.4e-10 68.6 54 53.7
vmacro19384 Vaccinium macrocarpon HOM05D006443 ORTHO05D007797 9.8e-10 67.4 97 45.4
ClCG11G013630 Citrullus lanatus HOM05D006443 ORTHO05D007797 2.2e-09 66.2 97 43.3
PRCOL_00005324 Prasinoderma coloniale HOM05D006443 ORTHO05D007797 8.6e-06 54.3 53 45.3


User provided reference genes

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