Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021344 Camellia sinensis var. sinensis HOM05D005272 ORTHO05D006890 6.5e-60 233.8 113 100.0
CSS0041652 Camellia sinensis var. sinensis HOM05D005272 ORTHO05D006890 6.5e-60 233.8 113 100.0
Gohir.D10G091400 Gossypium hirsutum HOM05D005272 ORTHO05D006890 1.0e-28 130.2 78 82.1
Gorai.011G100400 Gossypium raimondii HOM05D005272 ORTHO05D006890 1.0e-28 130.2 78 82.1
Duzib187G1472 Durio zibethinus HOM05D005272 ORTHO05D006890 2.3e-28 129.0 78 82.1
Gohir.A10G096700 Gossypium hirsutum HOM05D005272 ORTHO05D006890 6.6e-28 127.5 78 80.8
vmacro01069 Vaccinium macrocarpon HOM05D005272 ORTHO05D006890 6.6e-28 127.5 70 90.0
CiPaw.07G053400 Carya illinoinensis HOM05D005272 ORTHO05D006890 1.1e-27 126.7 70 90.0
COL.COLO4_21995 Corchorus olitorius HOM05D005272 ORTHO05D002654 1.1e-27 126.7 78 80.8
Atru.chr3.734 Acer truncatum HOM05D005272 ORTHO05D006890 1.5e-27 126.3 70 90.0
Manes.01G140700 Manihot esculenta HOM05D005272 ORTHO05D006890 5.6e-27 124.4 70 87.1
Potri.007G018600 Populus trichocarpa HOM05D005272 ORTHO05D006890 1.2e-26 123.2 70 87.1
QL06p034856 Quercus lobata HOM05D005272 ORTHO05D006890 1.2e-26 123.2 65 89.2
QL10p007431 Quercus lobata HOM05D005272 ORTHO05D006890 1.2e-26 123.2 65 89.2
GSVIVG01018859001 Vitis vinifera HOM05D005272 ORTHO05D006890 1.2e-26 123.2 72 83.3
Sc03g0003260 Simmondsia chinensis HOM05D005272 ORTHO05D006890 1.6e-26 122.9 70 85.7
Thecc.01G026600 Theobroma cacao HOM05D005272 ORTHO05D006890 1.6e-26 122.9 83 73.5
Rhsim04G0168600 Rhododendron simsii HOM05D005272 ORTHO05D006890 2.1e-26 122.5 70 87.1
Haze_03835 Corylus avellana HOM05D005272 ORTHO05D006890 2.8e-26 122.1 70 87.1
PSO170G5749 Papaver somniferum HOM05D005272 ORTHO05D006890 2.8e-26 122.1 70 85.7
Ciclev10025317m.g Citrus clementina HOM05D005272 ORTHO05D006890 3.6e-26 121.7 65 89.2
MELO3C016408.2 Cucumis melo HOM05D005272 ORTHO05D006890 4.7e-26 121.3 70 82.9
Dinv05203 Davidia involucrata HOM05D005272 ORTHO05D006890 4.7e-26 121.3 70 87.1
QL06p034836 Quercus lobata HOM05D005272 ORTHO05D006890 4.7e-26 121.3 65 87.7
QL10p007416 Quercus lobata HOM05D005272 ORTHO05D006890 4.7e-26 121.3 65 87.7
ClCG07G008770 Citrullus lanatus HOM05D005272 ORTHO05D006890 6.1e-26 120.9 70 84.3
Hma1.2p1_1114F.1_g258750 Hydrangea macrophylla HOM05D005272 ORTHO05D006890 6.1e-26 120.9 70 87.1
Sed0020582 Sechium edule HOM05D005272 ORTHO05D006890 8.0e-26 120.6 70 84.3
MBI04_g26283_MAGBIO Magnolia biondii HOM05D005272 ORTHO05D006890 2.3e-25 119.0 65 86.2
Sabra07G0015700 Salix brachista HOM05D005272 ORTHO05D006890 2.3e-25 119.0 70 84.3
Hma1.2p1_1114F.1_g258760 Hydrangea macrophylla HOM05D005272 ORTHO05D006890 3.0e-25 118.6 69 87.0
TAR381G0099 Trochodendron aralioides HOM05D005272 ORTHO05D006890 5.2e-25 117.9 70 84.3
CsaV3_4G005410 Cucumis sativus L. HOM05D005272 ORTHO05D006890 8.9e-25 117.1 70 81.4
Nn1g05787 Nelumbo nucifera HOM05D005272 ORTHO05D006890 8.9e-25 117.1 72 80.6
MD15G1251700 Malus domestica HOM05D005272 ORTHO05D006890 1.2e-24 116.7 70 80.0
TWI60G1562 Tripterygium wilfordii HOM05D005272 ORTHO05D006890 1.5e-24 116.3 74 78.4
Aa31LG6G13200 Aethionema arabicum HOM05D005272 ORTHO05D006890 3.4e-24 115.2 64 82.8
Aqoxy5G01527 Aquilegia oxysepala HOM05D005272 ORTHO05D006890 3.4e-24 115.2 64 84.4
Lj4A210T35 Lonicera japonica HOM05D005272 ORTHO05D006890 3.4e-24 115.2 70 81.4
PGR119G0710 Punica granatum HOM05D005272 ORTHO05D006890 4.4e-24 114.8 67 80.6
Cpa.g.sc6.186 Carica papaya HOM05D005272 ORTHO05D006890 5.7e-24 114.4 65 83.1
PGR119G2315 Punica granatum HOM05D005272 ORTHO05D006890 5.7e-24 114.4 67 80.6
THA.LOC104807474 Tarenaya hassleriana HOM05D005272 ORTHO05D006890 5.7e-24 114.4 64 82.8
Nitab4.5_0009648g0010 Nicotiana tabacum HOM05D005272 ORTHO05D006890 7.5e-24 114.0 70 81.4
CANSAT01G2901 Cannabis sativa HOM05D005272 ORTHO05D006890 9.8e-24 113.6 65 81.5
FvH4_1g12310 Fragaria vesca HOM05D005272 ORTHO05D006890 1.7e-23 112.8 70 77.1
FAN19G2225 Fragaria x ananassa HOM05D005272 ORTHO05D006890 1.7e-23 112.8 70 77.1
Nitab4.5_0000136g0150 Nicotiana tabacum HOM05D005272 ORTHO05D006890 1.7e-23 112.8 70 80.0
FAN26G2090 Fragaria x ananassa HOM05D005272 ORTHO05D006890 2.2e-23 112.5 70 77.1
FAN28G0729 Fragaria x ananassa HOM05D005272 ORTHO05D006890 2.2e-23 112.5 70 77.1
Prupe.7G162700 Prunus persica HOM05D005272 ORTHO05D006890 2.9e-23 112.1 70 77.1
Peaxi162Scf01079g00214 Petunia axillaris HOM05D005272 ORTHO05D006890 3.7e-23 111.7 70 80.0
AUR62007628 Chenopodium quinoa HOM05D005272 ORTHO05D006890 4.9e-23 111.3 65 78.5
FAN23G1388 Fragaria x ananassa HOM05D005272 ORTHO05D006890 4.9e-23 111.3 70 75.7
Solyc02g062430.3 Solanum lycopersicum HOM05D005272 ORTHO05D006890 4.9e-23 111.3 70 80.0
Sopen02g013430 Solanum pennellii HOM05D005272 ORTHO05D006890 4.9e-23 111.3 70 80.0
EL10As8g23880 Beta vulgaris HOM05D005272 ORTHO05D006890 6.4e-23 110.9 64 82.8
Migut.H02506 Erythranthe guttata HOM05D005272 ORTHO05D006890 6.4e-23 110.9 70 75.7
RcHm_v2.0_Chr2g0100131 Rosa chinensis HOM05D005272 ORTHO05D006890 6.4e-23 110.9 70 77.1
MSTRG.23263 Avicennia marina HOM05D005272 ORTHO05D006890 1.4e-22 109.8 70 75.7
AUR62004113 Chenopodium quinoa HOM05D005272 ORTHO05D006890 1.4e-22 109.8 65 78.5
Ca_24889_v3 Cicer arietinum L. HOM05D005272 ORTHO05D006890 1.4e-22 109.8 65 76.9
arahy.Tifrunner.gnm1.ann1.4MV4X2 Arachis hypogaea HOM05D005272 ORTHO05D006890 1.8e-22 109.4 78 69.2
arahy.Tifrunner.gnm1.ann1.CVF5QE Arachis hypogaea HOM05D005272 ORTHO05D006890 1.8e-22 109.4 78 69.2
Phvul.005G099900 Phaseolus vulgaris HOM05D005272 ORTHO05D006890 1.8e-22 109.4 70 77.1
PGSC0003DMG400015514 Solanum tuberosum HOM05D005272 ORTHO05D006890 1.8e-22 109.4 70 78.6
VMungo1215G0635 Vigna mungo HOM05D005272 ORTHO05D006890 1.8e-22 109.4 70 77.1
Os07g0187200 Oryza sativa ssp. japonica HOM05D005272 ORTHO05D006890 2.4e-22 109.0 65 78.5
CAN.G408.3 Capsicum annuum HOM05D005272 ORTHO05D006890 4.1e-22 108.2 70 77.1
Cc07_g10140 Coffea canephora HOM05D005272 ORTHO05D006890 4.1e-22 108.2 72 72.2
SalBow8G2913 Salvia bowleyana HOM05D005272 ORTHO05D006890 4.1e-22 108.2 70 74.3
DCAR_017317 Daucus carota HOM05D005272 ORTHO05D006890 5.4e-22 107.8 65 78.5
ECA238G0324 Erigeron canadensis HOM05D005272 ORTHO05D006890 7.0e-22 107.5 78 66.7
TPR.G2387 Trifolium pratense HOM05D005272 ORTHO05D006890 7.0e-22 107.5 65 75.4
Lalb_Chr09g0322041 Lupinus albus HOM05D005272 ORTHO05D006890 9.2e-22 107.1 70 77.1
Phvul.002G112400 Phaseolus vulgaris HOM05D005272 ORTHO05D006890 9.2e-22 107.1 70 75.7
HanXRQChr07g0190391 Helianthus annuus HOM05D005272 ORTHO05D006890 1.2e-21 106.7 78 66.7
Ah.03g141540 Amaranthus hybridus HOM05D005272 ORTHO05D006890 1.6e-21 106.3 64 81.2
unitig_899.g14634 Utricularia gibba HOM05D001473 ORTHO05D003900 1.6e-21 106.3 71 70.4
Lsat_1_v5_gn_2_78121 Lactuca sativa HOM05D005272 ORTHO05D006890 2.0e-21 105.9 78 64.1
A03p64220 Brassica napus HOM05D005272 ORTHO05D006890 2.7e-21 105.5 70 77.1
C07p61680 Brassica napus HOM05D005272 ORTHO05D006890 2.7e-21 105.5 70 77.1
BraA03t15492Z Brassica rapa HOM05D005272 ORTHO05D006890 2.7e-21 105.5 70 77.1
Zm00001eb302200 Zea mays HOM05D005272 ORTHO05D006890 2.7e-21 105.5 65 73.8
Thhalv10000690m.g Eutrema salsugineum HOM05D005272 ORTHO05D006890 3.5e-21 105.1 70 77.1
Lj2g0009312 Lotus japonicus HOM05D005272 ORTHO05D006890 3.5e-21 105.1 65 78.5
AT4G36400 Arabidopsis thaliana HOM05D005272 ORTHO05D006890 4.6e-21 104.8 70 77.1
Carub.0007s0391 Capsella rubella HOM05D005272 ORTHO05D006890 4.6e-21 104.8 70 77.1
Eucgr.I02389 Eucalyptus grandis HOM05D005272 ORTHO05D006890 4.6e-21 104.8 78 67.9
Glyma.01G169800 Glycine max HOM05D005272 ORTHO05D006890 4.6e-21 104.8 70 78.6
Medtr5g021240 Medicago truncatula HOM05D005272 ORTHO05D006890 4.6e-21 104.8 65 76.9
Hund16459 Selenicereus undatus HOM05D005272 ORTHO05D006890 7.8e-21 104.0 65 80.0
AL7G14690 Arabidopsis lyrata HOM05D005272 ORTHO05D006890 1.7e-20 102.8 70 75.7
BolC7t46592H Brassica oleracea HOM05D005272 ORTHO05D006890 1.7e-20 102.8 70 74.3
Thhalv10024815m.g Eutrema salsugineum HOM05D005272 ORTHO05D006890 3.0e-20 102.1 70 75.7
Sp7g34060 Schrenkiella parvula HOM05D005272 ORTHO05D006890 3.9e-20 101.7 70 74.3
Eucgr.I02388 Eucalyptus grandis HOM05D005272 ORTHO05D006890 5.0e-20 101.3 78 67.9
ATR0665G208 Amborella trichopoda HOM05D005272 ORTHO05D006890 8.6e-20 100.5 64 75.0
CDE07G0649 Ceratophyllum demersum HOM05D005272 ORTHO05D006890 1.5e-19 99.8 76 65.8
CARHR244730 Cardamine hirsuta HOM05D005272 ORTHO05D006890 2.5e-19 99.0 64 75.0
SEGI_28654 Sequoiadendron giganteum HOM05D005272 ORTHO05D006890 4.7e-18 94.7 72 65.3
Pp3c26_11820 Physcomitrium patens HOM05D005272 ORTHO05D006890 6.8e-17 90.9 64 64.1
Mapoly0113s0062 Marchantia polymorpha HOM05D005272 ORTHO05D006890 1.5e-16 89.7 70 58.6
Lsat_1_v5_gn_2_10260 Lactuca sativa HOM05D005272 ORTHO05D048367 3.4e-16 88.6 63 61.9
AagrBONN_evm.TU.Sc2ySwM_344.3428 Anthoceros agrestis HOM05D005272 ORTHO05D006890 1.1e-14 83.6 70 57.1
SMO364G0024 Selaginella moellendorffii HOM05D005272 ORTHO05D006890 1.6e-13 79.7 75 49.3
CBR_g3549 Chara braunii HOM05D005272 ORTHO05D006890 1.6e-10 69.7 76 43.4
Cfa023942 Carpinus fangiana HOM05D005272 ORTHO05D006890 6.8e-09 64.3 65 49.2
PRCOL_00001074 Prasinoderma coloniale HOM05D005272 ORTHO05D006890 1.2e-08 63.5 62 46.8
Glyma.01G073000 Glycine max HOM05D005272 ORTHO05D006890 9.9e-08 60.5 45 66.7
Cre08.g370550 Chlamydomonas reinhardtii HOM05D005272 ORTHO05D006890 4.1e-06 55.1 52 46.2
SGA_v2.0_scaffold102G29916 Striga asiatica HOM05D005272 ORTHO05D006890 5.4e-06 54.7 36 72.2


User provided reference genes

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