Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020238 Camellia sinensis var. sinensis HOM05D005164 ORTHO05D006398 4.9e-160 567.8 293 100.0
GSVIVG01009684001 Vitis vinifera HOM05D005164 ORTHO05D006398 1.9e-140 502.7 271 96.7
Dinv36062 Davidia involucrata HOM05D005164 ORTHO05D006398 5.7e-140 501.1 272 95.6
CiPaw.15G075600 Carya illinoinensis HOM05D005164 ORTHO05D006398 7.4e-140 500.7 271 95.6
Potri.002G263200 Populus trichocarpa HOM05D005164 ORTHO05D006398 3.7e-139 498.4 271 94.8
QL02p007897 Quercus lobata HOM05D005164 ORTHO05D006398 8.2e-139 497.3 270 95.6
TWI56G0324 Tripterygium wilfordii HOM05D005164 ORTHO05D006398 1.1e-138 496.9 271 95.2
CiPaw.16G055400 Carya illinoinensis HOM05D005164 ORTHO05D006398 1.8e-138 496.1 271 95.2
Lj4C784T1 Lonicera japonica HOM05D005164 ORTHO05D006398 3.1e-138 495.4 271 95.2
Lj3g0003260 Lotus japonicus HOM05D005164 ORTHO05D006398 9.0e-138 493.8 271 93.7
Potri.014G180800 Populus trichocarpa HOM05D005164 ORTHO05D006398 1.2e-137 493.4 271 94.8
Manes.18G028500 Manihot esculenta HOM05D005164 ORTHO05D006398 1.5e-137 493.0 271 94.8
Cfa018135 Carpinus fangiana HOM05D005164 ORTHO05D006398 2.0e-137 492.7 271 94.8
COL.COLO4_26343 Corchorus olitorius HOM05D005164 ORTHO05D006398 2.0e-137 492.7 271 93.7
Glyma.09G231100 Glycine max HOM05D005164 ORTHO05D006398 3.4e-137 491.9 271 94.1
Ciclev10001386m.g Citrus clementina HOM05D005164 ORTHO05D006398 4.5e-137 491.5 271 94.1
Glyma.12G005400 Glycine max HOM05D005164 ORTHO05D006398 7.7e-137 490.7 271 93.7
DCAR_019523 Daucus carota HOM05D005164 ORTHO05D006398 1.0e-136 490.3 271 94.1
Eucgr.F01909 Eucalyptus grandis HOM05D005164 ORTHO05D006398 1.0e-136 490.3 272 92.6
Gohir.A03G078200 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.0e-136 490.3 271 93.0
Thecc.08G024200 Theobroma cacao HOM05D005164 ORTHO05D006398 1.0e-136 490.3 271 92.6
Gohir.A01G116500 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.7e-136 489.6 271 91.5
Gohir.D02G094300 Gossypium hirsutum HOM05D005164 ORTHO05D006398 2.9e-136 488.8 271 92.6
Gorai.005G107200 Gossypium raimondii HOM05D005164 ORTHO05D006398 2.9e-136 488.8 271 92.6
Duzib041G0411 Durio zibethinus HOM05D005164 ORTHO05D006398 5.0e-136 488.0 271 92.3
RcHm_v2.0_Chr6g0300751 Rosa chinensis HOM05D005164 ORTHO05D006398 6.5e-136 487.6 272 92.6
TAR376G0296 Trochodendron aralioides HOM05D005164 ORTHO05D006398 8.5e-136 487.3 271 93.4
MELO3C003848.2 Cucumis melo HOM05D005164 ORTHO05D006398 1.1e-135 486.9 271 92.6
CsaV3_3G045000 Cucumis sativus L. HOM05D005164 ORTHO05D006398 1.1e-135 486.9 271 92.6
Cc10_g03080 Coffea canephora HOM05D005164 ORTHO05D006398 1.4e-135 486.5 272 93.0
Gorai.002G128900 Gossypium raimondii HOM05D005164 ORTHO05D006398 1.9e-135 486.1 271 91.1
HanXRQChr02g0040181 Helianthus annuus HOM05D005164 ORTHO05D006398 1.9e-135 486.1 271 92.6
Psat3g167280 Pisum sativum HOM05D005164 ORTHO05D006398 1.9e-135 486.1 271 92.6
Phvul.011G006200 Phaseolus vulgaris HOM05D005164 ORTHO05D006398 2.5e-135 485.7 271 92.6
Ca_25003_v3 Cicer arietinum L. HOM05D005164 ORTHO05D006398 3.2e-135 485.3 271 92.3
VMungo1127G0366 Vigna mungo HOM05D005164 ORTHO05D006398 3.2e-135 485.3 271 92.6
Nn5g29540 Nelumbo nucifera HOM05D005164 ORTHO05D006398 5.5e-135 484.6 271 92.3
Sc02g0006310 Simmondsia chinensis HOM05D005164 ORTHO05D006398 5.5e-135 484.6 271 92.3
CANSAT25G0119 Cannabis sativa HOM05D005164 ORTHO05D006398 7.2e-135 484.2 276 91.3
CANSAT64G0480 Cannabis sativa HOM05D005164 ORTHO05D006398 7.2e-135 484.2 271 92.6
FvH4_2g40000 Fragaria vesca HOM05D005164 ORTHO05D006398 7.2e-135 484.2 272 91.5
FAN15G2586 Fragaria x ananassa HOM05D005164 ORTHO05D006398 7.2e-135 484.2 272 91.5
FAN27G0257 Fragaria x ananassa HOM05D005164 ORTHO05D006398 7.2e-135 484.2 272 91.5
MSTRG.24294 Avicennia marina HOM05D005164 ORTHO05D006398 9.4e-135 483.8 271 92.6
Medtr0173s0030 Medicago truncatula HOM05D005164 ORTHO05D006398 1.2e-134 483.4 271 92.3
Gohir.A05G260000 Gossypium hirsutum HOM05D005164 ORTHO05D006398 2.1e-134 482.6 271 91.1
Lsat_1_v5_gn_1_17561 Lactuca sativa HOM05D005164 ORTHO05D006398 3.6e-134 481.9 271 91.9
Gohir.D01G104900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 7.9e-134 480.7 271 90.0
EL10Ac8g20456 Beta vulgaris HOM05D005164 ORTHO05D006398 1.0e-133 480.3 271 91.1
ECA247G1488 Erigeron canadensis HOM05D005164 ORTHO05D006398 1.0e-133 480.3 271 92.3
FAN20G1227 Fragaria x ananassa HOM05D005164 ORTHO05D006398 1.0e-133 480.3 272 90.4
Gohir.D05G261900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.8e-133 479.6 271 90.8
Solyc04g080160.3 Solanum lycopersicum HOM05D005164 ORTHO05D006398 1.8e-133 479.6 272 91.2
Sopen04g033750 Solanum pennellii HOM05D005164 ORTHO05D006398 1.8e-133 479.6 272 91.2
SGA_v2.0_scaffold326G48708 Striga asiatica HOM05D005164 ORTHO05D006398 2.3e-133 479.2 271 91.5
Sed0021376 Sechium edule HOM05D005164 ORTHO05D006398 3.0e-133 478.8 271 91.1
Aqoxy6G01049 Aquilegia oxysepala HOM05D005164 ORTHO05D006398 3.9e-133 478.4 271 90.0
Sed0001534 Sechium edule HOM05D005164 ORTHO05D006398 5.1e-133 478.0 272 91.2
PGSC0003DMG400005163 Solanum tuberosum HOM05D005164 ORTHO05D006398 5.1e-133 478.0 272 90.8
ATR0733G076 Amborella trichopoda HOM05D005164 ORTHO05D006398 1.5e-132 476.5 271 89.7
CDE02G4403 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 1.5e-132 476.5 271 89.3
Peaxi162Scf00690g00117 Petunia axillaris HOM05D005164 ORTHO05D006398 2.5e-132 475.7 271 91.5
MD08G1033300 Malus domestica HOM05D005164 ORTHO05D006398 5.7e-132 474.6 270 89.6
Gorai.009G273800 Gossypium raimondii HOM05D005164 ORTHO05D006398 7.4e-132 474.2 274 89.8
Nitab4.5_0010187g0010 Nicotiana tabacum HOM05D005164 ORTHO05D006398 7.4e-132 474.2 272 90.4
AUR62014895 Chenopodium quinoa HOM05D005164 ORTHO05D006398 9.7e-132 473.8 271 90.8
PGR031G3751 Punica granatum HOM05D005164 ORTHO05D006398 1.3e-131 473.4 271 90.4
SalBow8G2733 Salvia bowleyana HOM05D005164 ORTHO05D006398 1.7e-131 473.0 271 90.4
Nitab4.5_0000110g0500 Nicotiana tabacum HOM05D005164 ORTHO05D006398 6.3e-131 471.1 272 90.1
THA.LOC104822841 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 8.2e-131 470.7 271 88.9
THA.LOC104814156 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 1.1e-130 470.3 270 89.3
Hund21200 Selenicereus undatus HOM05D005164 ORTHO05D006398 3.1e-130 468.8 271 90.4
MD15G1029900 Malus domestica HOM05D005164 ORTHO05D006398 5.3e-130 468.0 268 88.8
Oeu009868.2 Olea europaea HOM05D005164 ORTHO05D006398 1.2e-129 466.8 281 87.5
Rhsim06G0035000 Rhododendron simsii HOM05D005164 ORTHO05D006398 4.5e-129 464.9 292 86.3
CAN.G1126.40 Capsicum annuum HOM05D005164 ORTHO05D006398 2.9e-128 462.2 272 88.6
Haze_17990 Corylus avellana HOM05D005164 ORTHO05D006398 3.8e-128 461.8 343 75.2
Os03g0197400 Oryza sativa ssp. japonica HOM05D005164 ORTHO05D006398 1.9e-127 459.5 271 87.1
CDE01G0241 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 3.2e-127 458.8 275 86.2
Hma1.2p1_0023F.1_g014900 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 1.6e-126 456.4 364 71.4
Migut.N00498 Erythranthe guttata HOM05D005164 ORTHO05D006398 4.7e-126 454.9 271 87.8
Thhalv10003436m.g Eutrema salsugineum HOM05D005164 ORTHO05D006398 1.8e-125 453.0 271 86.3
AT5G42970 Arabidopsis thaliana HOM05D005164 ORTHO05D006398 3.0e-125 452.2 271 85.6
Carub.0008s0578 Capsella rubella HOM05D005164 ORTHO05D006398 8.8e-125 450.7 271 85.2
unitig_22.g6774 Utricularia gibba HOM05D005164 ORTHO05D006398 8.8e-125 450.7 268 88.1
AL8G17800 Arabidopsis lyrata HOM05D005164 ORTHO05D006398 1.1e-124 450.3 271 85.6
Sp2g07720 Schrenkiella parvula HOM05D005164 ORTHO05D006398 1.1e-124 450.3 271 85.6
Actinidia22558 Actinidia chinensis HOM05D005164 ORTHO05D006398 2.6e-124 449.1 242 95.9
AUR62031100 Chenopodium quinoa HOM05D005164 ORTHO05D006398 2.6e-124 449.1 271 87.5
PSO675G3600 Papaver somniferum HOM05D005164 ORTHO05D006398 4.4e-124 448.4 272 83.8
PSO541G6137 Papaver somniferum HOM05D005164 ORTHO05D006398 7.4e-124 447.6 272 83.5
CARHR181050 Cardamine hirsuta HOM05D005164 ORTHO05D006398 9.7e-124 447.2 271 84.9
ClCG05G019140 Citrullus lanatus HOM05D005164 ORTHO05D006398 1.7e-123 446.4 271 87.1
BcaB07g30597 Brassica carinata HOM05D005164 ORTHO05D006398 2.8e-123 445.7 271 84.5
BcaC02g10785 Brassica carinata HOM05D005164 ORTHO05D006398 2.8e-123 445.7 271 84.5
BcaC06g31734 Brassica carinata HOM05D005164 ORTHO05D006398 2.8e-123 445.7 271 84.5
A06p48120 Brassica napus HOM05D005164 ORTHO05D006398 2.8e-123 445.7 271 84.5
C04p25110 Brassica napus HOM05D005164 ORTHO05D006398 2.8e-123 445.7 271 84.5
BolC4t24015H Brassica oleracea HOM05D005164 ORTHO05D006398 2.8e-123 445.7 271 84.5
BraA06t27681Z Brassica rapa HOM05D005164 ORTHO05D006398 2.8e-123 445.7 271 84.5
BcaC03g16546 Brassica carinata HOM05D005164 ORTHO05D006398 4.8e-123 444.9 271 84.5
C02p43640 Brassica napus HOM05D005164 ORTHO05D006398 4.8e-123 444.9 271 84.5
A02p27610 Brassica napus HOM05D005164 ORTHO05D006398 6.3e-123 444.5 271 84.5
BolC2t10406H Brassica oleracea HOM05D005164 ORTHO05D006398 6.3e-123 444.5 271 84.5
BraA02t07794Z Brassica rapa HOM05D005164 ORTHO05D006398 6.3e-123 444.5 271 84.5
Prupe.1G381600 Prunus persica HOM05D005164 ORTHO05D006398 6.3e-123 444.5 271 86.3
Hma1.2p1_0469F.1_g159190 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 8.2e-123 444.1 302 81.1
Zm00001eb008060 Zea mays HOM05D005164 ORTHO05D006398 1.1e-122 443.7 311 76.5
Aa31LG9G13090 Aethionema arabicum HOM05D005164 ORTHO05D006398 3.5e-121 438.7 271 84.5
Mapoly0072s0034 Marchantia polymorpha HOM05D005164 ORTHO05D006398 5.9e-121 438.0 271 81.2
Sabra14G0141000 Salix brachista HOM05D005164 ORTHO05D006398 2.1e-118 429.5 310 78.1
Pp3c5_28450 Physcomitrium patens HOM05D005164 ORTHO05D006398 4.7e-118 428.3 270 80.7
SMO364G0673 Selaginella moellendorffii HOM05D005164 ORTHO05D006398 6.7e-117 424.5 271 79.3
MBI17_g39721_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 7.4e-116 421.0 304 75.7
AagrBONN_evm.TU.Sc2ySwM_117.2514 Anthoceros agrestis HOM05D005164 ORTHO05D006398 1.1e-114 417.2 271 77.1
Atru.chr13.515 Acer truncatum HOM05D005164 ORTHO05D006398 8.5e-112 407.5 227 93.8
CAN.G416.53 Capsicum annuum HOM05D005164 ORTHO05D006398 1.5e-111 406.8 279 78.5
Manes.05G161900 Manihot esculenta HOM05D005164 ORTHO05D006398 5.5e-111 404.8 227 91.6
RcHm_v2.0_Chr2g0166611 Rosa chinensis HOM05D005164 ORTHO05D006398 8.0e-110 401.0 226 92.5
TPR.G3648 Trifolium pratense HOM05D005164 ORTHO05D006398 1.6e-105 386.7 260 81.2
vmacro21627 Vaccinium macrocarpon HOM05D005164 ORTHO05D006398 8.5e-104 380.9 272 77.9
CBR_g36268 Chara braunii HOM05D005164 ORTHO05D006398 1.1e-103 380.6 268 71.6
HPP92_024905 Vanilla planifolia HOM05D005164 ORTHO05D006398 8.6e-96 354.4 224 82.6
Duzib093G0265 Durio zibethinus HOM05D005164 ORTHO05D006398 2.5e-87 326.2 271 67.5
Actinidia15313 Actinidia chinensis HOM05D005164 ORTHO05D006398 4.4e-84 315.5 293 64.5
Cre11.g478240 Chlamydomonas reinhardtii HOM05D005164 ORTHO05D006398 1.1e-74 284.3 268 55.2
MCO16G668 Micromonas commoda HOM05D005164 ORTHO05D006398 1.1e-71 274.2 272 53.7
PRCOL_00006114 Prasinoderma coloniale HOM05D005164 ORTHO05D006398 4.0e-69 265.8 272 53.7
MBI17_g35116_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 1.0e-56 224.6 184 70.1
GSVIVG01023193001 Vitis vinifera HOM05D005164 ORTHO05D006398 2.8e-46 189.9 111 90.1
GSVIVG01003780001 Vitis vinifera HOM05D005164 ORTHO05D006398 9.0e-45 184.9 111 87.4
Cfa024373 Carpinus fangiana HOM05D005164 ORTHO05D006398 1.5e-44 184.1 234 43.6
Haze_26904 Corylus avellana HOM05D005164 ORTHO05D006398 6.7e-40 168.7 205 44.4
Cpa.g.sc64.68 Carica papaya HOM05D005164 ORTHO05D006398 1.0e-35 154.8 89 88.8
SEGI_27147 Sequoiadendron giganteum HOM05D005164 ORTHO05D006398 1.5e-31 141.0 86 80.2
Sopen04g033730 Solanum pennellii HOM05D005164 ORTHO05D006398 3.8e-27 126.3 88 71.6
arahy.Tifrunner.gnm1.ann1.ABX6XB Arachis hypogaea HOM05D005164 ORTHO05D006398 4.5e-20 102.8 99 61.6
TPR.G136 Trifolium pratense HOM05D005164 ORTHO05D006398 1.1e-15 88.2 49 81.6
Lalb_Chr07g0184681 Lupinus albus HOM05D001185 ORTHO05D003777 4.8e-06 56.2 202 26.7


User provided reference genes

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