Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr13.515 chr13 - View
Actinidia chinensis Actinidia15313 Lachesis_group26 - View
Actinidia chinensis Actinidia22558 Lachesis_group28 - View
Avicennia marina MSTRG.24294 ScioBoG_4088_HRSCAF_4107 - View
Aquilegia oxysepala Aqoxy6G01049 CHR06 + View
Arabidopsis thaliana AT5G42970 Proteasome component (PCI) domain protein encodes subunit 4 of COP9 signalosome complex. sequence is similar to a subunit of the 19S regulatory particle of the 26S proteasome. recessive mutation causes derepression of photomorphogenesis. CONSTITUTIVE PHOTOMORPHOGENIC 8 (COP8)%3B FUNCTIONS IN: protein binding%3B INVOLVED IN: cullin deneddylation%2C negative regulation of photomorphogenesis%2C G2 phase of mitotic cell cycle%2C photomorphogenesis%3B LOCATED IN: signalosome%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C Proteasome component (PCI) domain (InterPro:IPR000717)%3B BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase subunit 5B (TAIR:AT5G64760.2)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Capsicum annuum CAN.G1126.40 PGAv.1.6.scaffold1126 + View
Cannabis sativa CANSAT25G0119 NC_044370.1 + View
Corylus avellana Haze_17990 Similar to CSN4: COP9 signalosome complex subunit 4 (Arabidopsis thaliana OX%3D3702) 7 - View
Coffea canephora Cc10_g03080 COP9 signalosome complex subunit 4 chr10 - View
Citrus clementina Ciclev10001386m.g scaffold_5 + View
Ceratophyllum demersum CDE02G4403 1 - View
Ceratophyllum demersum CDE01G0241 11 - View
Carpinus fangiana Cfa018135 Cfa07 + View
Carya illinoinensis CiPaw.15G075600 K12178 - COP9 signalosome complex subunit 4 (COPS4, CSN4) Chr15 + View
Carya illinoinensis CiPaw.16G055400 PTHR10855//PTHR10855:SF2 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 // COP9 SIGNALOSOME COMPLEX SUBUNIT 4 Chr16 + View
Citrullus lanatus ClCG05G019140 COP9 signalosome complex subunit 4 CG_Chr05 - View
Cucumis melo MELO3C003848.2 COP9 signalosome complex subunit 4, putative, expressed chr04 + View
Corchorus olitorius COL.COLO4_26343 hypothetical protein AWUE01019231.1 - View
Carica papaya Cpa.g.sc64.68 supercontig_64 + View
Capsella rubella Carub.0008s0578 K12178 - COP9 signalosome complex subunit 4 (COPS4, CSN4) scaffold_8 + View
Cucumis sativus L. CsaV3_3G045000 COP9 signalosome complex subunit 4 chr3 + View
Daucus carota DCAR_019523 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv36062 GWHABJS00000002 + View
Durio zibethinus Duzib041G0411 NW_019167826.1 - View
Durio zibethinus Duzib093G0265 NW_019167937.1 + View
Erigeron canadensis ECA247G1488 Conyza_canadensis_scaffold:7 + View
Eucalyptus grandis Eucgr.F01909 Chr06 - View
Erythranthe guttata Migut.N00498 scaffold_14 - View
Eutrema salsugineum Thhalv10003436m.g K12178 - COP9 signalosome complex subunit 4 (COPS4, CSN4) scaffold_17 + View
Fragaria x ananassa FAN15G2586 K12178 - COP9 signalosome complex subunit 4 (COPS4, CSN4) Fvb2-4 - View
Fragaria x ananassa FAN27G0257 K12178 - COP9 signalosome complex subunit 4 (COPS4, CSN4) Fvb2-1 - View
Fragaria x ananassa FAN20G1227 K12178 - COP9 signalosome complex subunit 4 (COPS4, CSN4) Fvb2-3 + View
Fragaria vesca FvH4_2g40000 K12178 - COP9 signalosome complex subunit 4 (COPS4, CSN4) Fvb2 - View
Gossypium hirsutum Gohir.D01G104900 K12178 - COP9 signalosome complex subunit 4 (COPS4, CSN4) D01 - View
Gossypium hirsutum Gohir.A05G260000 K12178 - COP9 signalosome complex subunit 4 (COPS4, CSN4) A05 - View
Gossypium hirsutum Gohir.A03G078200 K12178 - COP9 signalosome complex subunit 4 (COPS4, CSN4) A03 + View
Gossypium hirsutum Gohir.D05G261900 K12178 - COP9 signalosome complex subunit 4 (COPS4, CSN4) D05 - View
Gossypium hirsutum Gohir.A01G116500 K12178 - COP9 signalosome complex subunit 4 (COPS4, CSN4) A01 - View
Gossypium raimondii Gorai.005G107200 Chr05 + View
Gossypium raimondii Gorai.009G273800 Chr09 - View
Gossypium raimondii Gorai.002G128900 Chr02 - View
Hydrangea macrophylla Hma1.2p1_0023F.1_g014900 Hma1.2p1_0023F.1 - View
Hydrangea macrophylla Hma1.2p1_0469F.1_g159190 Hma1.2p1_0469F.1 - View
Lonicera japonica Lj4C784T1 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_1_17561 Lsat_1_v8_lg_1 - View
Malus domestica MD08G1033300 Proteasome component (PCI) domain protein Chr08 + View
Malus domestica MD15G1029900 Proteasome component (PCI) domain protein Chr15 + View
Manihot esculenta Manes.05G161900 Chromosome05 - View
Manihot esculenta Manes.18G028500 Chromosome18 - View
Nelumbo nucifera Nn5g29540 chr5 + View
Nicotiana tabacum Nitab4.5_0000110g0500 Winged helix-turn-helix DNA-binding domain, Proteasome component (PCI) domain Nitab4.5_0000110 - View
Olea europaea Oeu009868.2 chr4 + View
Petunia axillaris Peaxi162Scf00690g00117 COP9 signalosome complex subunit 4 Peaxi162Scf00690 + View
Punica granatum PGR031G3751 NC_045127.1 - View
Prunus persica Prupe.1G381600 Pp01 - View
Papaver somniferum PSO541G6137 NC_039363.1 - View
Papaver somniferum PSO675G3600 NC_039358.1 + View
Populus trichocarpa Potri.002G263200 PTHR10855//PTHR10855:SF2 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 // COP9 SIGNALOSOME COMPLEX SUBUNIT 4 Chr02 - View
Populus trichocarpa Potri.014G180800 K12178 - COP9 signalosome complex subunit 4 (COPS4, CSN4) Chr14 + View
Quercus lobata QL02p007897 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr6g0300751 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim06G0035000 chr06 - View
Striga asiatica SGA_v2.0_scaffold326G48708 scaffold326 + View
Salvia bowleyana SalBow8G2733 GWHASIU00000004 - View
Salix brachista Sabra14G0141000 GWHAAZH00000014 + View
Simmondsia chinensis Sc02g0006310 GWHAASQ00000002 - View
Sechium edule Sed0021376 LG01 - View
Sechium edule Sed0001534 LG13 + View
Solanum lycopersicum Solyc04g080160.3 COP9 signalosome complex subunit 4 (AHRD V3.3 *** A0A1U8GKH2_CAPAN) SL4.0ch04 + View
Schrenkiella parvula Sp2g07720 K12178 - COP9 signalosome complex subunit 4 (COPS4, CSN4) ch2-4 - View
Solanum pennellii Sopen04g033730 encodes subunit 4 of COP9 signalosome complex. sequence is similar to a subunit of the 19S regulatory particle of the 26S proteasome. recessive mutation causes derepression of photomorphogenesis. | CONSTITUTIVE PHOTOMORPHOGENIC 8 (COP8) | FUNCTIONS IN: protein binding | INVOLVED IN: cullin deneddylation, negative regulation of photomorphogenesis, G2 phase of mitotic cell cycle, photomorphogenesis | LOCATED IN: signalosome | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding , Proteasome component (PCI) domain | BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase subunit 5B Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400005163 Cop9 complex subunit ST4.03ch04 + View
Trochodendron aralioides TAR376G0296 group14 + View
Theobroma cacao Thecc.08G024200 Proteasome component (PCI) domain protein Chromosome_8 + View
Tripterygium wilfordii TWI56G0324 NC_052242.1 + View
Vaccinium macrocarpon vmacro21627 Similar to CSN4: COP9 signalosome complex subunit 4 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01009684001 chr18 + View