Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018665 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D028375 3.5e-94 348.2 169 100.0
CSS0001589 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D028375 8.8e-77 290.4 145 95.9
CSS0015436 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D002182 2.5e-71 272.3 150 90.0
CSS0030645 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D002182 9.4e-55 217.2 123 89.4
CSS0002676 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D028375 1.9e-47 193.0 102 95.1
Actinidia30138 Actinidia chinensis HOM05D000001 ORTHO05D002182 1.8e-29 133.3 135 59.3
Actinidia09526 Actinidia chinensis HOM05D000001 ORTHO05D002182 8.3e-27 124.4 133 57.1
Rhsim01G0261400 Rhododendron simsii HOM05D000001 ORTHO05D002182 4.1e-26 122.1 130 56.2
Rhsim13G0038900 Rhododendron simsii HOM05D000001 ORTHO05D002182 3.5e-25 119.0 132 53.8
vmacro14807 Vaccinium macrocarpon HOM05D000001 ORTHO05D002182 4.3e-23 112.1 131 51.9
Dinv16381 Davidia involucrata HOM05D000001 ORTHO05D002182 1.8e-21 106.7 133 49.6
Lj1A72T50 Lonicera japonica HOM05D000001 ORTHO05D002182 8.3e-19 97.8 132 46.2
Haze_24678 Corylus avellana HOM05D000001 ORTHO05D002182 5.6e-15 85.1 134 38.1
Lj1C72G5 Lonicera japonica HOM05D000001 ORTHO05D002182 9.5e-15 84.3 134 41.8
Cfa002466 Carpinus fangiana HOM05D000001 ORTHO05D002182 2.1e-14 83.2 127 38.6
Lj2A1144G94 Lonicera japonica HOM05D000001 ORTHO05D002182 1.1e-13 80.9 124 44.4
Thecc.01G253100 Theobroma cacao HOM05D000001 ORTHO05D002182 2.2e-11 73.2 122 41.0
Atru.chr5.1792 Acer truncatum HOM05D000001 ORTHO05D002182 6.4e-11 71.6 141 38.3
Atru.chr5.1799 Acer truncatum HOM05D000001 ORTHO05D002182 6.4e-11 71.6 141 38.3
Oeu064635.2 Olea europaea HOM05D000001 ORTHO05D002182 2.4e-10 69.7 104 43.3
QL09p040907 Quercus lobata HOM05D000001 ORTHO05D002182 5.4e-10 68.6 130 33.1
SGA_v2.0_scaffold138G35197 Striga asiatica HOM05D000001 ORTHO05D002182 6.0e-09 65.1 121 36.4
CiPaw.03G268500 Carya illinoinensis HOM05D000001 ORTHO05D002182 1.0e-08 64.3 154 31.8
PGSC0003DMG400014714 Solanum tuberosum HOM05D000001 ORTHO05D002182 1.7e-08 63.5 107 39.3
Duzib138G0763 Durio zibethinus HOM05D000001 ORTHO05D002182 2.3e-08 63.2 128 35.2
Solyc06g008210.4 Solanum lycopersicum HOM05D000001 ORTHO05D002182 5.1e-08 62.0 142 36.6
Gohir.A07G205000 Gossypium hirsutum HOM05D000001 ORTHO05D002182 1.5e-07 60.5 130 33.8
Gohir.D07G211000 Gossypium hirsutum HOM05D000001 ORTHO05D002182 1.5e-07 60.5 130 33.8
COL.COLO4_08954 Corchorus olitorius HOM05D000001 ORTHO05D002182 2.5e-07 59.7 144 33.3
Nitab4.5_0006980g0010 Nicotiana tabacum HOM05D000001 ORTHO05D002182 4.3e-07 58.9 130 33.8
Sopen06g003070 Solanum pennellii HOM05D000001 ORTHO05D002182 4.3e-07 58.9 142 35.2
Gorai.001G238400 Gossypium raimondii HOM05D000001 ORTHO05D002182 7.3e-07 58.2 130 33.1
Nitab4.5_0000326g0240 Nicotiana tabacum HOM05D000001 ORTHO05D002182 7.3e-07 58.2 128 33.6
Peaxi162Scf01157g00215 Petunia axillaris HOM05D000001 ORTHO05D002182 7.3e-07 58.2 135 34.1
TAR362G1208 Trochodendron aralioides HOM05D000001 ORTHO05D002182 7.3e-07 58.2 136 37.5
CAN.G941.4 Capsicum annuum HOM05D000001 ORTHO05D002182 1.2e-06 57.4 143 35.7
Manes.12G035400 Manihot esculenta HOM05D000001 ORTHO05D002182 1.6e-06 57.0 148 35.1
MSTRG.21471 Avicennia marina HOM05D000001 ORTHO05D002182 6.2e-06 55.1 144 32.6
ClCG07G001270 Citrullus lanatus HOM05D000001 ORTHO05D002182 8.1e-06 54.7 129 33.3


User provided reference genes

Program Settings