Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 6.9e-44 180.6 119 100.0
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 1.2e-32 143.3 108 84.3
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 1.4e-28 129.8 108 87.0
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 1.8e-28 129.4 108 86.1
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 1.2e-27 126.7 105 70.5
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 4.5e-27 124.8 103 79.6
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 7.6e-27 124.0 108 79.6
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 1.7e-26 122.9 107 69.2
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 1.7e-26 122.9 121 62.8
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 1.7e-26 122.9 105 77.1
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 2.9e-26 122.1 108 64.8
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 3.8e-26 121.7 105 61.9
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 5.0e-26 121.3 107 71.0
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 8.4e-26 120.6 105 83.8
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 1.1e-25 120.2 108 52.8
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 1.4e-25 119.8 104 79.8
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 1.4e-25 119.8 108 52.8
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 1.9e-25 119.4 103 79.6
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 1.9e-25 119.4 107 71.0
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 4.2e-25 118.2 103 82.5
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 5.5e-25 117.9 106 74.5
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 5.5e-25 117.9 107 79.4
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 7.2e-25 117.5 104 70.2
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 9.3e-25 117.1 104 69.2
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 9.3e-25 117.1 104 73.1
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 1.2e-24 116.7 103 68.9
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 2.1e-24 115.9 103 72.8
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 2.7e-24 115.5 105 56.2
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 2.7e-24 115.5 103 68.9
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 3.5e-24 115.2 107 61.7
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 3.5e-24 115.2 108 50.9
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 4.6e-24 114.8 107 63.6
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 6.1e-24 114.4 102 70.6
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 7.9e-24 114.0 105 64.8
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.0e-23 113.6 108 49.1
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 1.0e-23 113.6 102 65.7
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 1.8e-23 112.8 107 63.6
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 2.3e-23 112.5 106 67.9
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 3.0e-23 112.1 105 73.3
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 3.0e-23 112.1 99 75.8
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 3.9e-23 111.7 107 69.2
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 5.1e-23 111.3 105 72.4
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 5.1e-23 111.3 110 65.5
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 6.7e-23 110.9 107 73.8
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 6.7e-23 110.9 106 65.1
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.1e-22 110.2 106 49.1
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 1.1e-22 110.2 105 73.3
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 1.5e-22 109.8 106 78.3
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 1.5e-22 109.8 102 51.0
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 2.5e-22 109.0 105 61.0
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 4.3e-22 108.2 113 61.1
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 5.7e-22 107.8 104 65.4
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 5.7e-22 107.8 106 67.9
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 7.4e-22 107.5 104 74.0
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 9.7e-22 107.1 103 68.0
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 1.3e-21 106.7 102 50.0
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 1.6e-21 106.3 106 69.8
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 2.8e-21 105.5 108 75.0
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 3.7e-21 105.1 102 61.8
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 6.3e-21 104.4 103 71.8
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 1.4e-20 103.2 106 69.8
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 1.8e-20 102.8 106 64.2
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 2.4e-20 102.4 106 75.5
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 2.4e-20 102.4 105 75.2
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 2.4e-20 102.4 107 72.0
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 3.1e-20 102.1 107 72.9
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 5.3e-20 101.3 149 39.6
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 6.9e-20 100.9 102 76.5
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 6.9e-20 100.9 113 72.6
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 1.2e-19 100.1 102 61.8
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 1.2e-19 100.1 102 61.8
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.2e-19 100.1 107 67.3
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 2.6e-19 99.0 105 63.8
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 3.4e-19 98.6 104 73.1
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 4.5e-19 98.2 104 73.1
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 5.9e-19 97.8 43 95.3
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 5.9e-19 97.8 109 69.7
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 7.7e-19 97.4 105 72.4
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 7.7e-19 97.4 105 72.4
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 7.7e-19 97.4 105 72.4
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 1.0e-18 97.1 108 57.4
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 1.3e-18 96.7 104 74.0
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 1.7e-18 96.3 105 71.4
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 1.7e-18 96.3 105 71.4
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 1.7e-18 96.3 105 71.4
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 1.7e-18 96.3 105 71.4
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 1.7e-18 96.3 105 73.3
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 2.2e-18 95.9 105 71.4
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 2.2e-18 95.9 106 70.8
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 3.8e-18 95.1 105 70.5
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 8.5e-18 94.0 105 72.4
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 8.5e-18 94.0 46 87.0
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 2.1e-16 89.4 109 57.8
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 3.6e-16 88.6 103 69.9
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 6.1e-16 87.8 104 65.4
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 7.9e-16 87.4 107 62.6
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 1.0e-15 87.0 87 75.9
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 3.9e-15 85.1 103 70.9
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 4.3e-14 81.6 118 40.7
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 2.2e-13 79.3 87 77.0
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 3.7e-13 78.6 106 68.9
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 3.7e-13 78.6 105 67.6
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 3.7e-13 78.6 43 76.7
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 1.5e-11 73.2 42 71.4
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 7.2e-09 64.3 103 61.2
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 7.2e-09 64.3 103 61.2
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 2.6e-06 55.8 92 34.8


User provided reference genes

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