Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018221 Camellia sinensis var. sinensis HOM05D005082 ORTHO05D006474 7.0e-69 263.8 135 100.0
vmacro16288 Vaccinium macrocarpon HOM05D005082 ORTHO05D006474 1.6e-52 209.5 120 85.0
Rhsim04G0008200 Rhododendron simsii HOM05D005082 ORTHO05D006474 3.0e-51 205.3 117 84.6
Actinidia20586 Actinidia chinensis HOM05D005082 ORTHO05D006474 1.9e-50 202.6 121 85.1
Lj5C170T16 Lonicera japonica HOM05D005082 ORTHO05D006474 4.3e-50 201.4 118 83.9
Dinv14185 Davidia involucrata HOM05D005082 ORTHO05D006474 6.2e-49 197.6 117 82.9
Eucgr.H05005 Eucalyptus grandis HOM05D005082 ORTHO05D006474 1.4e-48 196.4 119 79.8
MD05G1011800 Malus domestica HOM05D005082 ORTHO05D006474 8.9e-48 193.7 119 79.0
QL11p056821 Quercus lobata HOM05D005082 ORTHO05D006474 3.4e-47 191.8 118 78.8
GSVIVG01023855001 Vitis vinifera HOM05D005082 ORTHO05D006474 5.8e-47 191.0 119 80.7
PGR042G3506 Punica granatum HOM05D005082 ORTHO05D006474 7.5e-47 190.7 119 77.3
MD10G1011800 Malus domestica HOM05D005082 ORTHO05D006474 9.8e-47 190.3 119 79.0
Thecc.02G148100 Theobroma cacao HOM05D005082 ORTHO05D006474 1.3e-46 189.9 119 78.2
Duzib132G0508 Durio zibethinus HOM05D005082 ORTHO05D006474 6.4e-46 187.6 119 73.9
Duzib248G1564 Durio zibethinus HOM05D005082 ORTHO05D006474 8.3e-46 187.2 119 74.8
Ciclev10028098m.g Citrus clementina HOM05D005082 ORTHO05D006474 1.1e-45 186.8 119 75.6
Cfa005396 Carpinus fangiana HOM05D005082 ORTHO05D006474 2.4e-45 185.7 119 75.6
CiPaw.05G095000 Carya illinoinensis HOM05D005082 ORTHO05D006474 2.4e-45 185.7 119 75.6
Phvul.010G038400 Phaseolus vulgaris HOM05D005082 ORTHO05D006474 2.4e-45 185.7 112 81.2
Oeu006114.1 Olea europaea HOM05D005082 ORTHO05D006474 3.2e-45 185.3 117 75.2
Cc09_g10910 Coffea canephora HOM05D005082 ORTHO05D006474 4.1e-45 184.9 117 76.9
TAR628G0288 Trochodendron aralioides HOM05D005082 ORTHO05D006474 4.1e-45 184.9 107 83.2
Glyma.03G097900 Glycine max HOM05D005082 ORTHO05D006474 9.2e-45 183.7 131 69.5
Gohir.A01G011600 Gossypium hirsutum HOM05D005082 ORTHO05D006474 1.3e-43 179.9 119 72.3
Prupe.8G016800 Prunus persica HOM05D005082 ORTHO05D006474 1.3e-43 179.9 119 73.1
Cpa.g.c29182.1 Carica papaya HOM05D005082 ORTHO05D006474 1.7e-43 179.5 119 73.9
VMungo0331G1808 Vigna mungo HOM05D005082 ORTHO05D006474 1.7e-43 179.5 116 75.0
Glyma.07G124000 Glycine max HOM05D005082 ORTHO05D006474 2.3e-43 179.1 116 75.0
RcHm_v2.0_Chr6g0277491 Rosa chinensis HOM05D005082 ORTHO05D006474 2.3e-43 179.1 119 73.1
COL.COLO4_03850 Corchorus olitorius HOM05D005082 ORTHO05D006474 3.9e-43 178.3 119 72.3
EL10Ac9g21557 Beta vulgaris HOM05D005082 ORTHO05D006474 5.1e-43 177.9 120 70.0
PSO210G0895 Papaver somniferum HOM05D005082 ORTHO05D006474 5.1e-43 177.9 118 76.3
Lj3g0023171 Lotus japonicus HOM05D005082 ORTHO05D006474 6.6e-43 177.6 116 72.4
arahy.Tifrunner.gnm1.ann1.44ERQ5 Arachis hypogaea HOM05D005082 ORTHO05D006474 1.5e-42 176.4 134 64.9
arahy.Tifrunner.gnm1.ann1.M18VWQ Arachis hypogaea HOM05D005082 ORTHO05D006474 1.5e-42 176.4 134 64.9
PSO675G0919 Papaver somniferum HOM05D005082 ORTHO05D006474 1.5e-42 176.4 118 75.4
SalBow1G4726 Salvia bowleyana HOM05D005082 ORTHO05D006474 1.5e-42 176.4 116 74.1
ATR0605G166 Amborella trichopoda HOM05D005082 ORTHO05D006474 1.9e-42 176.0 119 72.3
PGR142G3202 Punica granatum HOM05D005082 ORTHO05D006474 1.9e-42 176.0 119 71.4
AL8G41310 Arabidopsis lyrata HOM05D005082 ORTHO05D006474 2.5e-42 175.6 120 71.7
MBI01_g28404_MAGBIO Magnolia biondii HOM05D005082 ORTHO05D006474 3.3e-42 175.3 119 73.9
PGR004G1860 Punica granatum HOM05D005082 ORTHO05D006474 3.3e-42 175.3 117 71.8
Gohir.D01G012800 Gossypium hirsutum HOM05D005082 ORTHO05D006474 4.3e-42 174.9 119 70.6
AUR62010207 Chenopodium quinoa HOM05D005082 ORTHO05D006474 5.6e-42 174.5 118 69.5
Sabra04G0140300 Salix brachista HOM05D005082 ORTHO05D006474 5.6e-42 174.5 119 69.7
Potri.009G169700 Populus trichocarpa HOM05D005082 ORTHO05D006474 7.3e-42 174.1 119 69.7
Hund06352 Selenicereus undatus HOM05D005082 ORTHO05D006474 7.3e-42 174.1 115 73.0
Aqoxy6G02995 Aquilegia oxysepala HOM05D005082 ORTHO05D006474 1.2e-41 173.3 119 73.1
Manes.02G091600 Manihot esculenta HOM05D005082 ORTHO05D006474 2.1e-41 172.6 119 72.3
ClCG02G003240 Citrullus lanatus HOM05D005082 ORTHO05D006474 2.8e-41 172.2 121 71.1
Sed0020521 Sechium edule HOM05D005082 ORTHO05D006474 3.6e-41 171.8 121 72.7
AT5G64050 Arabidopsis thaliana HOM05D005082 ORTHO05D006474 4.7e-41 171.4 120 70.0
MSTRG.16959 Avicennia marina HOM05D005082 ORTHO05D006474 4.7e-41 171.4 116 71.6
Gorai.002G014600 Gossypium raimondii HOM05D005082 ORTHO05D006474 6.2e-41 171.0 113 72.6
TWI59G1375 Tripterygium wilfordii HOM05D005082 ORTHO05D006474 6.2e-41 171.0 116 70.7
AUR62013197 Chenopodium quinoa HOM05D005082 ORTHO05D006474 8.1e-41 170.6 118 66.9
CsaV3_7G002150 Cucumis sativus L. HOM05D005082 ORTHO05D006474 1.4e-40 169.9 121 70.2
Aa31LG1G17860 Aethionema arabicum HOM05D005082 ORTHO05D006474 1.8e-40 169.5 116 70.7
Nitab4.5_0010601g0010 Nicotiana tabacum HOM05D005082 ORTHO05D006474 1.8e-40 169.5 120 71.7
TPR.G17355 Trifolium pratense HOM05D005082 ORTHO05D006474 2.3e-40 169.1 116 68.1
DCAR_001519 Daucus carota HOM05D005082 ORTHO05D006474 3.1e-40 168.7 113 70.8
Ca_25889_v3 Cicer arietinum L. HOM05D005082 ORTHO05D006474 4.0e-40 168.3 131 61.1
MELO3C015693.2 Cucumis melo HOM05D005082 ORTHO05D006474 4.0e-40 168.3 121 69.4
Thhalv10003868m.g Eutrema salsugineum HOM05D005082 ORTHO05D006474 4.0e-40 168.3 120 68.3
Nitab4.5_0001220g0040 Nicotiana tabacum HOM05D005082 ORTHO05D006474 6.8e-40 167.5 120 70.8
BcaB02g09792 Brassica carinata HOM05D005082 ORTHO05D006474 8.9e-40 167.2 120 68.3
FAN20G1299 Fragaria x ananassa HOM05D005082 ORTHO05D006474 8.9e-40 167.2 114 70.2
Carub.0008s2483 Capsella rubella HOM05D005082 ORTHO05D006474 1.2e-39 166.8 120 68.3
CARHR277960 Cardamine hirsuta HOM05D005082 ORTHO05D006474 1.2e-39 166.8 120 68.3
FAN24G2999 Fragaria x ananassa HOM05D005082 ORTHO05D006474 1.2e-39 166.8 114 70.2
Atru.BG.54.p Acer truncatum HOM05D005082 ORTHO05D006474 1.5e-39 166.4 107 72.0
CDE06G2564 Ceratophyllum demersum HOM05D005082 ORTHO05D006474 1.5e-39 166.4 119 66.4
FAN27G0598 Fragaria x ananassa HOM05D005082 ORTHO05D006474 1.5e-39 166.4 114 69.3
Sp2g27120 Schrenkiella parvula HOM05D005082 ORTHO05D006474 2.0e-39 166.0 120 67.5
HanXRQChr14g0455171 Helianthus annuus HOM05D005082 ORTHO05D006474 2.6e-39 165.6 105 72.4
FAN15G2332 Fragaria x ananassa HOM05D005082 ORTHO05D006474 3.4e-39 165.2 114 69.3
ECA233G3220 Erigeron canadensis HOM05D005082 ORTHO05D006474 4.4e-39 164.9 105 72.4
Solyc01g112290.4 Solanum lycopersicum HOM05D005082 ORTHO05D006474 4.4e-39 164.9 107 73.8
Sopen01g054400 Solanum pennellii HOM05D005082 ORTHO05D006474 4.4e-39 164.9 107 73.8
DCAR_006224 Daucus carota HOM05D005082 ORTHO05D006474 5.8e-39 164.5 112 68.8
SGA_v2.0_scaffold5G02667 Striga asiatica HOM05D005082 ORTHO05D006474 5.8e-39 164.5 114 68.4
Medtr8g009900 Medicago truncatula HOM05D005082 ORTHO05D006474 9.9e-39 163.7 116 65.5
BcaC01g02661 Brassica carinata HOM05D005082 ORTHO05D006474 1.3e-38 163.3 120 67.5
A06p30760 Brassica napus HOM05D005082 ORTHO05D006474 1.3e-38 163.3 120 67.5
C03p62220 Brassica napus HOM05D005082 ORTHO05D006474 1.3e-38 163.3 120 67.5
BraA06t26018Z Brassica rapa HOM05D005082 ORTHO05D006474 1.3e-38 163.3 120 67.5
CAN.G1645.8 Capsicum annuum HOM05D005082 ORTHO05D006474 2.2e-38 162.5 120 68.3
THA.LOC104800058 Tarenaya hassleriana HOM05D005082 ORTHO05D006474 3.8e-38 161.8 121 66.1
Ah.01g017700 Amaranthus hybridus HOM05D005082 ORTHO05D006474 6.4e-38 161.0 120 62.5
BolC3t18485H Brassica oleracea HOM05D005082 ORTHO05D006474 6.4e-38 161.0 120 66.7
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 1.4e-37 159.8 120 62.5
Lj9C409G6 Lonicera japonica HOM05D005082 ORTHO05D006474 1.9e-37 159.5 95 81.1
Lalb_Chr12g0210191 Lupinus albus HOM05D005082 ORTHO05D006474 1.9e-37 159.5 117 65.8
Peaxi162Scf00362g00137 Petunia axillaris HOM05D005082 ORTHO05D006474 2.4e-37 159.1 120 68.3
Lsat_1_v5_gn_8_119500 Lactuca sativa HOM05D005082 ORTHO05D006474 3.2e-37 158.7 104 71.2
Lalb_Chr07g0194811 Lupinus albus HOM05D005082 ORTHO05D006474 3.2e-37 158.7 116 64.7
Dinv41859 Davidia involucrata HOM05D005082 ORTHO05D006474 2.1e-36 156.0 92 82.6
Os02g0121000 Oryza sativa ssp. japonica HOM05D005082 ORTHO05D006474 2.7e-36 155.6 107 68.2
Migut.B00003 Erythranthe guttata HOM05D005082 ORTHO05D006474 1.0e-35 153.7 108 69.4
Zm00001eb230310 Zea mays HOM05D005082 ORTHO05D006474 3.9e-35 151.8 117 63.2
Zm00001eb208250 Zea mays HOM05D005082 ORTHO05D006474 6.6e-35 151.0 114 64.0
SEGI_01300 Sequoiadendron giganteum HOM05D005082 ORTHO05D006474 8.9e-32 140.6 113 58.4
AagrBONN_evm.TU.Sc2ySwM_117.3203 Anthoceros agrestis HOM05D005082 ORTHO05D006474 1.0e-27 127.1 116 53.4
Psat4g215760 Pisum sativum HOM05D005082 ORTHO05D006474 3.0e-27 125.6 108 61.1
SMO134G0063 Selaginella moellendorffii HOM05D005082 ORTHO05D006474 3.0e-27 125.6 117 52.1
Mapoly0005s0181 Marchantia polymorpha HOM05D005082 ORTHO05D006474 3.3e-26 122.1 116 49.1
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 3.3e-26 122.1 108 59.3
SGA_v2.0_scaffold104G30258 Striga asiatica HOM05D005082 ORTHO05D006474 5.6e-26 121.3 98 63.3
Pp3c1_10010 Physcomitrium patens HOM05D005082 ORTHO05D006474 7.6e-23 110.9 105 48.6
CBR_g25940 Chara braunii HOM05D005082 ORTHO05D006474 9.3e-21 104.0 119 43.7
Nitab4.5_0005317g0010 Nicotiana tabacum HOM05D005082 ORTHO05D006474 2.7e-20 102.4 69 76.8
Aa31LG6G3290 Aethionema arabicum HOM05D005082 ORTHO05D006474 2.5e-18 95.9 56 83.9
Cre07.g313700 Chlamydomonas reinhardtii HOM05D005082 ORTHO05D006474 1.8e-16 89.7 97 44.3
Haze_01956 Corylus avellana HOM05D005082 ORTHO05D006474 2.2e-14 82.8 119 41.2
Sc08g0002050 Simmondsia chinensis HOM05D005082 ORTHO05D006474 2.1e-12 76.3 42 81.0
PRCOL_00001874 Prasinoderma coloniale HOM05D005082 ORTHO05D006474 2.7e-12 75.9 116 38.8
Pp3c2_37890 Physcomitrium patens HOM05D005082 ORTHO05D006474 7.9e-12 74.3 90 46.7
MCO11G616 Micromonas commoda HOM05D005082 ORTHO05D006474 4.0e-08 62.0 94 37.2
FAN04G1942 Fragaria x ananassa HOM05D005082 ORTHO05D006474 2.0e-07 59.7 107 32.7


User provided reference genes

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