Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017834 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 0.0e+00 1401.3 844 100.0
CSS0033092 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 0.0e+00 1398.6 844 99.8
Actinidia37752 Actinidia chinensis HOM05D004426 ORTHO05D005417 6.8e-279 964.1 839 69.8
Dinv12344 Davidia involucrata HOM05D004426 ORTHO05D005417 5.1e-258 894.8 838 69.2
GSVIVG01020162001 Vitis vinifera HOM05D004426 ORTHO05D005417 1.0e-226 790.8 845 62.2
vmacro07479 Vaccinium macrocarpon HOM05D004426 ORTHO05D005417 2.2e-221 773.1 817 62.7
Haze_20162 Corylus avellana HOM05D004426 ORTHO05D005417 6.3e-192 675.2 848 57.7
QL07p036440 Quercus lobata HOM05D004426 ORTHO05D005417 1.6e-190 670.6 832 57.5
Cc06_g06650 Coffea canephora HOM05D004426 ORTHO05D005417 3.5e-190 669.5 822 56.2
Manes.09G046200 Manihot esculenta HOM05D004426 ORTHO05D005417 1.5e-185 654.1 840 53.9
Prupe.7G093800 Prunus persica HOM05D004426 ORTHO05D005417 3.4e-185 652.9 841 55.2
Cfa020044 Carpinus fangiana HOM05D004426 ORTHO05D005417 2.7e-182 643.3 841 57.6
Sopen03g029610 Solanum pennellii HOM05D004426 ORTHO05D005417 5.9e-182 642.1 834 56.6
Potri.016G069100 Populus trichocarpa HOM05D004426 ORTHO05D005417 1.0e-181 641.3 842 53.8
Atru.chr8.1340 Acer truncatum HOM05D004426 ORTHO05D005417 1.9e-180 637.1 844 52.3
Thecc.05G105900 Theobroma cacao HOM05D004426 ORTHO05D005417 1.6e-179 634.0 841 52.1
CAN.G861.37 Capsicum annuum HOM05D004426 ORTHO05D005417 4.7e-179 632.5 807 57.1
RcHm_v2.0_Chr3g0476141 Rosa chinensis HOM05D004426 ORTHO05D005417 1.0e-178 631.3 806 54.6
Solyc03g020020.3 Solanum lycopersicum HOM05D004426 ORTHO05D005417 1.0e-178 631.3 834 56.2
TAR369G0229 Trochodendron aralioides HOM05D004426 ORTHO05D005417 4.0e-178 629.4 906 53.0
CiPaw.10G018400 Carya illinoinensis HOM05D004426 ORTHO05D005417 6.8e-178 628.6 841 53.9
COL.COLO4_29556 Corchorus olitorius HOM05D004426 ORTHO05D005417 3.4e-177 626.3 809 55.5
Lj1A1205G57 Lonicera japonica HOM05D004426 ORTHO05D005417 5.7e-177 625.5 812 56.2
TAR375G1129 Trochodendron aralioides HOM05D004426 ORTHO05D005417 1.7e-176 624.0 918 51.6
CANSAT64G0287 Cannabis sativa HOM05D004426 ORTHO05D005417 1.4e-175 620.9 838 51.8
Cpa.g.sc104.21 Carica papaya HOM05D004426 ORTHO05D005417 2.3e-173 613.6 806 52.0
Glyma.02G195600 Glycine max HOM05D004426 ORTHO05D005417 2.3e-173 613.6 836 53.0
Nitab4.5_0004363g0030 Nicotiana tabacum HOM05D004426 ORTHO05D005417 5.0e-173 612.5 808 55.3
Gorai.009G393700 Gossypium raimondii HOM05D004426 ORTHO05D005417 1.8e-170 604.0 846 50.5
Gohir.D04G091700 Gossypium hirsutum HOM05D004426 ORTHO05D005417 4.0e-170 602.8 846 51.2
Sabra16G0070000 Salix brachista HOM05D004426 ORTHO05D005417 1.3e-168 597.8 853 50.2
Ciclev10010887m.g Citrus clementina HOM05D004426 ORTHO05D005417 8.3e-168 595.1 845 51.0
Nitab4.5_0001495g0100 Nicotiana tabacum HOM05D004426 ORTHO05D005417 9.2e-167 591.7 809 53.2
FAN05G5173 Fragaria x ananassa HOM05D004426 ORTHO05D005417 4.6e-166 589.3 808 51.7
TWI74G0602 Tripterygium wilfordii HOM05D004426 ORTHO05D005417 4.6e-166 589.3 838 51.1
FAN05G1531 Fragaria x ananassa HOM05D004426 ORTHO05D005417 5.9e-166 589.0 808 52.0
Gohir.A04G053650 Gossypium hirsutum HOM05D004426 ORTHO05D005417 7.8e-166 588.6 846 49.4
FvH4_6g20410 Fragaria vesca HOM05D004426 ORTHO05D005417 1.3e-165 587.8 807 51.9
Ca_11691_v3 Cicer arietinum L. HOM05D004426 ORTHO05D005417 3.0e-165 586.6 803 52.7
Peaxi162Scf00171g00133 Petunia axillaris HOM05D004426 ORTHO05D005417 3.0e-165 586.6 769 55.1
Lalb_Chr06g0172651 Lupinus albus HOM05D004426 ORTHO05D005417 9.5e-164 581.6 839 50.7
Lj5g0003460 Lotus japonicus HOM05D004426 ORTHO05D005417 2.1e-163 580.5 843 51.1
FAN09G4366 Fragaria x ananassa HOM05D004426 ORTHO05D005417 8.0e-163 578.6 807 51.7
FAN14G5903 Fragaria x ananassa HOM05D004426 ORTHO05D005417 8.0e-163 578.6 807 51.7
arahy.Tifrunner.gnm1.ann1.C5PQVK Arachis hypogaea HOM05D004426 ORTHO05D005417 5.2e-162 575.9 837 50.4
arahy.Tifrunner.gnm1.ann1.S879XT Arachis hypogaea HOM05D004426 ORTHO05D005417 6.8e-162 575.5 837 50.2
FAN09G0172 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.2e-161 574.7 807 50.3
Glyma.10G082100 Glycine max HOM05D004426 ORTHO05D005417 1.5e-161 574.3 834 49.9
Migut.J00694 Erythranthe guttata HOM05D004426 ORTHO05D005417 1.3e-160 571.2 851 50.1
TPR.G2812 Trifolium pratense HOM05D004426 ORTHO05D005417 4.9e-160 569.3 802 53.2
DCAR_020696 Daucus carota HOM05D004426 ORTHO05D005417 1.4e-159 567.8 806 51.4
FAN02G2855 Fragaria x ananassa HOM05D004426 ORTHO05D005417 7.0e-159 565.5 806 50.1
VMungo0720G0551 Vigna mungo HOM05D004426 ORTHO05D005417 3.5e-158 563.1 802 50.6
MSTRG.5892 Avicennia marina HOM05D004426 ORTHO05D005417 6.0e-158 562.4 835 49.1
Phvul.007G267500 Phaseolus vulgaris HOM05D004426 ORTHO05D005417 2.3e-157 560.5 836 49.2
Oeu035645.2 Olea europaea HOM05D004426 ORTHO05D005417 7.3e-156 555.4 801 52.1
Nn6g34673 Nelumbo nucifera HOM05D004426 ORTHO05D005417 2.3e-154 550.4 907 50.7
Eucgr.A02578 Eucalyptus grandis HOM05D004426 ORTHO05D005417 1.2e-153 548.1 841 49.2
MD14G1040500 Malus domestica HOM05D004426 ORTHO05D005417 7.5e-153 545.4 847 51.0
Duzib093G0840 Durio zibethinus HOM05D004426 ORTHO05D005417 2.9e-152 543.5 839 49.3
ClCG10G018280 Citrullus lanatus HOM05D004426 ORTHO05D005417 1.2e-150 538.1 848 50.7
MELO3C009545.2 Cucumis melo HOM05D004426 ORTHO05D005417 2.1e-150 537.3 817 49.1
Psat6g115600 Pisum sativum HOM05D004426 ORTHO05D005417 5.2e-146 522.7 845 50.7
CsaV3_3G038030 Cucumis sativus L. HOM05D004426 ORTHO05D005417 4.1e-143 513.1 848 49.9
Medtr1g056800 Medicago truncatula HOM05D004426 ORTHO05D005417 4.1e-143 513.1 837 49.7
Sed0007001 Sechium edule HOM05D004426 ORTHO05D005417 2.2e-136 490.7 845 45.3
PSO339G1314 Papaver somniferum HOM05D004426 ORTHO05D005417 1.9e-135 487.6 880 45.8
ECA233G4189 Erigeron canadensis HOM05D004426 ORTHO05D005417 2.4e-135 487.3 819 47.1
PSO384G1970 Papaver somniferum HOM05D004426 ORTHO05D005417 3.2e-135 486.9 881 44.5
Aqoxy1G00646 Aquilegia oxysepala HOM05D004426 ORTHO05D005417 9.3e-135 485.3 921 45.4
AUR62027347 Chenopodium quinoa HOM05D004426 ORTHO05D005417 3.6e-131 473.4 797 48.3
MBI03_g28304_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 4.8e-131 473.0 906 42.1
EL10Ac5g11771 Beta vulgaris HOM05D004426 ORTHO05D005417 2.4e-130 470.7 846 46.8
AUR62040133 Chenopodium quinoa HOM05D004426 ORTHO05D005417 2.6e-129 467.2 810 47.4
Ah.12g059670 Amaranthus hybridus HOM05D004426 ORTHO05D005417 1.3e-128 464.9 836 47.7
THA.LOC104816640 Tarenaya hassleriana HOM05D004426 ORTHO05D005417 7.9e-126 455.7 845 43.4
HanXRQChr13g0398531 Helianthus annuus HOM05D004426 ORTHO05D005417 4.8e-123 446.4 775 47.2
Sc22g0002960 Simmondsia chinensis HOM05D004426 ORTHO05D005417 8.1e-123 445.7 534 55.8
AL3G16340 Arabidopsis lyrata HOM05D004426 ORTHO05D005417 2.0e-121 441.0 842 43.8
Dinv31767 Davidia involucrata HOM05D004426 ORTHO05D005417 4.5e-121 439.9 322 77.3
AT3G05680 Arabidopsis thaliana HOM05D004426 ORTHO05D005417 1.3e-120 438.3 842 42.4
Thhalv10019873m.g Eutrema salsugineum HOM05D004426 ORTHO05D005417 2.9e-120 437.2 808 43.2
Carub.0003s0502 Capsella rubella HOM05D004426 ORTHO05D005417 7.1e-119 432.6 852 43.2
CARHR080130 Cardamine hirsuta HOM05D004426 ORTHO05D005417 1.1e-116 425.2 843 42.7
Sp3g04560 Schrenkiella parvula HOM05D004426 ORTHO05D005417 7.6e-113 412.5 843 41.6
Aa31LG5G16100 Aethionema arabicum HOM05D004426 ORTHO05D005417 2.5e-111 407.5 840 42.9
PGR004G1788 Punica granatum HOM05D004426 ORTHO05D005417 5.1e-109 399.8 851 41.4
BraA03t12600Z Brassica rapa HOM05D004426 ORTHO05D005417 1.1e-108 398.7 808 42.2
A03p34260 Brassica napus HOM05D004426 ORTHO05D005417 4.3e-108 396.7 822 41.8
BcaB04g19244 Brassica carinata HOM05D004426 ORTHO05D005417 1.1e-106 392.1 838 41.3
BolC3t16451H Brassica oleracea HOM05D004426 ORTHO05D005417 9.0e-106 389.0 808 41.1
C03p41680 Brassica napus HOM05D004426 ORTHO05D005417 2.0e-105 387.9 806 41.1
BcaB04g19248 Brassica carinata HOM05D004426 ORTHO05D005417 7.4e-100 369.4 805 40.7
Lsat_1_v5_gn_6_33801 Lactuca sativa HOM05D004426 ORTHO05D005417 7.4e-100 369.4 806 43.5
SGA_v2.0_scaffold115G32146 Striga asiatica HOM05D004426 ORTHO05D005417 1.1e-98 365.5 840 43.1
unitig_578.g15811 Utricularia gibba HOM05D004426 ORTHO05D005417 3.8e-88 330.5 805 37.4
Dinv31766 Davidia involucrata HOM05D004426 ORTHO05D005417 2.2e-83 314.7 462 56.3
Oeu036109.3 Olea europaea HOM05D004426 ORTHO05D005417 1.6e-62 245.4 432 46.1
ATR0665G194 Amborella trichopoda HOM05D004426 ORTHO05D005417 1.5e-60 238.8 710 34.6
HPP92_005908 Vanilla planifolia HOM05D004426 ORTHO05D005417 3.4e-60 237.7 816 38.2
CDE07G0138 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 1.0e-56 226.1 384 42.7
MD12G1041200 Malus domestica HOM05D004426 ORTHO05D005417 3.4e-52 211.1 431 47.1
TPR.G15240 Trifolium pratense HOM05D004426 ORTHO05D005417 1.1e-50 206.1 252 57.5
Os03g0554900 Oryza sativa ssp. japonica HOM05D004426 ORTHO05D005417 7.0e-50 203.4 721 35.4
Psat2g116240 Pisum sativum HOM05D004426 ORTHO05D005417 1.2e-49 202.6 247 52.6
SEGI_22283 Sequoiadendron giganteum HOM05D004426 ORTHO05D005417 8.9e-45 186.4 734 31.2
Zm00001eb220020 Zea mays HOM05D004426 ORTHO05D005417 3.4e-44 184.5 878 31.5
Psat2g116200 Pisum sativum HOM05D004426 ORTHO05D005417 2.8e-38 164.9 163 62.6
Psat5g196200 Pisum sativum HOM05D004426 ORTHO05D005417 1.7e-27 129.0 139 59.0
Actinidia03884 Actinidia chinensis HOM05D004426 ORTHO05D005417 9.6e-23 113.2 135 53.3
Duzib093G0602 Durio zibethinus HOM05D004426 ORTHO05D005417 2.1e-22 112.1 178 39.9
Actinidia03992 Actinidia chinensis HOM05D004426 ORTHO05D005417 8.4e-19 100.1 106 56.6
CDE04G0059 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 8.4e-19 100.1 219 35.2
Psat5g133160 Pisum sativum HOM05D004426 ORTHO05D005417 4.2e-18 97.8 109 56.9
Mapoly0014s0197 Marchantia polymorpha HOM05D004426 ORTHO05D005417 3.0e-16 91.7 276 31.2
Psat5g196160 Pisum sativum HOM05D004426 ORTHO05D005417 7.6e-12 77.0 89 53.9
AagrBONN_evm.TU.Sc2ySwM_368.1933 Anthoceros agrestis HOM05D004426 ORTHO05D005417 6.4e-11 73.9 113 39.8
Pp3c22_17700 Physcomitrium patens HOM05D004426 ORTHO05D005417 6.4e-11 73.9 102 47.1
CDE07G2012 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 1.1e-10 73.2 433 31.4
Psat2g137560 Pisum sativum HOM05D004426 ORTHO05D005417 2.4e-10 72.0 84 52.4
Actinidia03993 Actinidia chinensis HOM05D004426 ORTHO05D005417 8.7e-08 63.5 102 43.1
CDE04G1213 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 5.6e-07 60.8 305 35.1
CBR_g906 Chara braunii HOM05D004426 ORTHO05D005417 2.1e-06 58.9 116 37.9


User provided reference genes

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