Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017614 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 6.6e-78 293.9 141 100.0
CSS0008831 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 2.9e-65 251.9 128 93.0
CSS0026603 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 2.9e-65 251.9 128 93.0
CSS0019305 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 4.2e-64 248.1 139 86.3
QL03p052624 Quercus lobata HOM05D006443 ORTHO05D007797 9.0e-59 230.3 126 84.1
Cfa009372 Carpinus fangiana HOM05D006443 ORTHO05D007797 5.8e-58 227.6 126 83.3
Manes.13G011800 Manihot esculenta HOM05D006443 ORTHO05D007797 7.6e-58 227.3 126 83.3
CsaV3_5G030250 Cucumis sativus L. HOM05D006443 ORTHO05D007797 1.7e-57 226.1 126 82.5
Sabra03G0125800 Salix brachista HOM05D006443 ORTHO05D007797 2.2e-57 225.7 126 82.5
Thhalv10008060m.g Eutrema salsugineum HOM05D006443 ORTHO05D007797 2.9e-57 225.3 126 83.3
Ciclev10031911m.g Citrus clementina HOM05D006443 ORTHO05D007797 3.8e-57 224.9 126 82.5
Aa31LG1G3790 Aethionema arabicum HOM05D006443 ORTHO05D007797 6.4e-57 224.2 126 81.0
Atru.chr11.2327 Acer truncatum HOM05D006443 ORTHO05D007797 8.4e-57 223.8 126 84.1
Cpa.g.sc43.60 Carica papaya HOM05D006443 ORTHO05D007797 8.4e-57 223.8 126 83.3
Haze_12422 Corylus avellana HOM05D006443 ORTHO05D007797 8.4e-57 223.8 126 82.5
Potri.003G171900 Populus trichocarpa HOM05D006443 ORTHO05D007797 8.4e-57 223.8 126 81.7
PGR119G0512 Punica granatum HOM05D006443 ORTHO05D007797 8.4e-57 223.8 126 83.3
TAR629G0791 Trochodendron aralioides HOM05D006443 ORTHO05D007797 8.4e-57 223.8 125 84.0
Duzib248G1079 Durio zibethinus HOM05D006443 ORTHO05D007797 1.1e-56 223.4 126 81.7
Thecc.02G208000 Theobroma cacao HOM05D006443 ORTHO05D007797 1.1e-56 223.4 126 83.3
MELO3C011863.2 Cucumis melo HOM05D006443 ORTHO05D007797 1.4e-56 223.0 126 81.7
PSO017G6191 Papaver somniferum HOM05D006443 ORTHO05D007797 1.4e-56 223.0 126 83.3
PSO478G2155 Papaver somniferum HOM05D006443 ORTHO05D007797 1.4e-56 223.0 126 83.3
CANSAT01G1158 Cannabis sativa HOM05D006443 ORTHO05D007797 2.4e-56 222.2 126 80.2
BcaB08g37422 Brassica carinata HOM05D006443 ORTHO05D007797 5.4e-56 221.1 126 81.0
RcHm_v2.0_Chr4g0430211 Rosa chinensis HOM05D006443 ORTHO05D007797 5.4e-56 221.1 126 80.2
arahy.Tifrunner.gnm1.ann1.DXN1WG Arachis hypogaea HOM05D006443 ORTHO05D007797 7.1e-56 220.7 126 77.8
Eucgr.H04637 Eucalyptus grandis HOM05D006443 ORTHO05D007797 7.1e-56 220.7 125 80.0
GSVIVG01010487001 Vitis vinifera HOM05D006443 ORTHO05D007797 7.1e-56 220.7 126 81.7
A09p64340 Brassica napus HOM05D004937 ORTHO05D007797 9.3e-56 220.3 126 81.0
BraA09t41778Z Brassica rapa HOM05D006443 ORTHO05D007797 9.3e-56 220.3 126 81.0
TWI36G0197 Tripterygium wilfordii HOM05D006443 ORTHO05D007797 9.3e-56 220.3 126 80.2
Sc14g0009070 Simmondsia chinensis HOM05D006443 ORTHO05D007797 1.2e-55 219.9 126 81.7
THA.LOC104807130 Tarenaya hassleriana HOM05D006443 ORTHO05D007797 1.2e-55 219.9 126 79.4
CiPaw.05G109500 Carya illinoinensis HOM05D006443 ORTHO05D007797 1.6e-55 219.5 126 80.2
Nn4g22309 Nelumbo nucifera HOM05D006443 ORTHO05D007797 1.6e-55 219.5 126 81.7
Actinidia30647 Actinidia chinensis HOM05D006443 ORTHO05D007797 2.1e-55 219.2 126 83.3
FAN17G1989 Fragaria x ananassa HOM05D006443 ORTHO05D007797 2.1e-55 219.2 126 79.4
Gohir.D04G182900 Gossypium hirsutum HOM05D006443 ORTHO05D007797 2.1e-55 219.2 126 80.2
Gorai.012G175900 Gossypium raimondii HOM05D006443 ORTHO05D007797 2.1e-55 219.2 126 80.2
HanXRQChr08g0207841 Helianthus annuus HOM05D006443 ORTHO05D007797 2.1e-55 219.2 126 81.7
Carub.0001s1145 Capsella rubella HOM05D006443 ORTHO05D007797 2.7e-55 218.8 126 80.2
FvH4_4g23730 Fragaria vesca HOM05D006443 ORTHO05D007797 2.7e-55 218.8 126 79.4
FAN07G1264 Fragaria x ananassa HOM05D006443 ORTHO05D007797 2.7e-55 218.8 126 79.4
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 3.5e-55 218.4 127 80.3
Glyma.18G006200 Glycine max HOM05D006443 ORTHO05D007797 3.5e-55 218.4 126 79.4
BcaC07g41759 Brassica carinata HOM05D006443 ORTHO05D007797 4.6e-55 218.0 126 80.2
C08p47970 Brassica napus HOM05D006443 ORTHO05D007797 4.6e-55 218.0 126 80.2
BolC8t52335H Brassica oleracea HOM05D006443 ORTHO05D007797 4.6e-55 218.0 126 80.2
Lsat_1_v5_gn_4_56020 Lactuca sativa HOM05D006443 ORTHO05D007797 4.6e-55 218.0 126 81.0
Lalb_Chr11g0075761 Lupinus albus HOM05D006443 ORTHO05D007797 4.6e-55 218.0 126 77.8
MBI11_g05329_MAGBIO Magnolia biondii HOM05D006443 ORTHO05D007797 4.6e-55 218.0 125 81.6
arahy.Tifrunner.gnm1.ann1.P16M7J Arachis hypogaea HOM05D006443 ORTHO05D007797 6.0e-55 217.6 126 77.0
Gohir.A04G139700 Gossypium hirsutum HOM05D006443 ORTHO05D007797 6.0e-55 217.6 126 80.2
Glyma.11G250800 Glycine max HOM05D006443 ORTHO05D007797 1.0e-54 216.9 126 77.8
MD13G1119500 Malus domestica HOM05D006443 ORTHO05D007797 1.3e-54 216.5 126 77.8
AL1G22970 Arabidopsis lyrata HOM05D006443 ORTHO05D007797 1.8e-54 216.1 126 79.4
AT1G11780 Arabidopsis thaliana HOM05D006443 ORTHO05D007797 1.8e-54 216.1 126 79.4
MSTRG.502 Avicennia marina HOM05D006443 ORTHO05D007797 1.8e-54 216.1 126 78.6
Hma1.2p1_0065F.1_g035440 Hydrangea macrophylla HOM05D006443 ORTHO05D007797 1.8e-54 216.1 126 78.6
Prupe.1G225500 Prunus persica HOM05D006443 ORTHO05D007797 2.3e-54 215.7 126 77.8
Aqoxy5G03367 Aquilegia oxysepala HOM05D006443 ORTHO05D007797 3.0e-54 215.3 125 80.0
CARHR012120 Cardamine hirsuta HOM05D006443 ORTHO05D007797 3.9e-54 214.9 126 79.4
Sp1g10410 Schrenkiella parvula HOM05D006443 ORTHO05D007797 3.9e-54 214.9 126 79.4
FAN22G2300 Fragaria x ananassa HOM05D006443 ORTHO05D007797 5.1e-54 214.5 126 77.8
Phvul.001G262100 Phaseolus vulgaris HOM05D006443 ORTHO05D007797 5.1e-54 214.5 126 77.0
Oeu058924.1 Olea europaea HOM05D006443 ORTHO05D007797 8.7e-54 213.8 126 78.6
Sed0000233 Sechium edule HOM05D006443 ORTHO05D007797 8.7e-54 213.8 126 78.6
COL.COLO4_20406 Corchorus olitorius HOM05D006443 ORTHO05D007797 1.5e-53 213.0 126 79.4
CDE05G3615 Ceratophyllum demersum HOM05D006443 ORTHO05D007797 2.5e-53 212.2 126 77.0
Nitab4.5_0008905g0010 Nicotiana tabacum HOM05D006443 ORTHO05D007797 3.3e-53 211.8 126 75.4
TPR.G17786 Trifolium pratense HOM05D006443 ORTHO05D007797 4.3e-53 211.5 126 75.4
Rhsim12G0099900 Rhododendron simsii HOM05D006443 ORTHO05D007797 5.6e-53 211.1 126 81.0
Hund06091 Selenicereus undatus HOM05D006443 ORTHO05D007797 5.6e-53 211.1 126 77.8
Psat5g096400 Pisum sativum HOM05D006443 ORTHO05D007797 7.4e-53 210.7 126 75.4
AUR62028926 Chenopodium quinoa HOM05D006443 ORTHO05D007797 9.6e-53 210.3 125 77.6
Ca_16457_v3 Cicer arietinum L. HOM05D006443 ORTHO05D007797 9.6e-53 210.3 126 73.8
Medtr3g085290 Medicago truncatula HOM05D006443 ORTHO05D007797 9.6e-53 210.3 126 75.4
Cc11_g16930 Coffea canephora HOM05D006443 ORTHO05D007797 1.3e-52 209.9 126 76.2
VMungo1383G0397 Vigna mungo HOM05D006443 ORTHO05D007797 1.3e-52 209.9 126 75.4
Lj6g0022486 Lotus japonicus HOM05D006443 ORTHO05D007797 1.6e-52 209.5 126 76.2
Nitab4.5_0001356g0010 Nicotiana tabacum HOM05D006443 ORTHO05D007797 1.6e-52 209.5 126 74.6
EL10Ac6g13506 Beta vulgaris HOM05D006443 ORTHO05D007797 2.1e-52 209.1 132 75.8
AUR62005622 Chenopodium quinoa HOM05D006443 ORTHO05D007797 3.6e-52 208.4 125 76.8
CAN.G237.4 Capsicum annuum HOM05D006443 ORTHO05D007797 1.1e-51 206.8 126 72.2
Migut.K00736 Erythranthe guttata HOM05D006443 ORTHO05D007797 1.1e-51 206.8 126 77.0
Solyc04g045590.3 Solanum lycopersicum HOM05D006443 ORTHO05D007797 1.1e-51 206.8 126 73.8
Sopen04g017520 Solanum pennellii HOM05D006443 ORTHO05D007797 1.1e-51 206.8 126 73.8
Peaxi162Scf00359g00713 Petunia axillaris HOM05D006443 ORTHO05D007797 1.4e-51 206.5 126 73.8
unitig_747.g21126 Utricularia gibba HOM05D006443 ORTHO05D007797 5.3e-51 204.5 122 77.9
Zm00001eb169540 Zea mays HOM05D006443 ORTHO05D007797 2.6e-50 202.2 126 74.6
ATR0561G191 Amborella trichopoda HOM05D006443 ORTHO05D007797 4.5e-50 201.4 126 74.6
Os11g0488500 Oryza sativa ssp. japonica HOM05D006443 ORTHO05D007797 4.5e-50 201.4 126 73.8
SGA_v2.0_scaffold9G04677 Striga asiatica HOM05D006443 ORTHO05D007797 7.6e-50 200.7 141 70.2
Lj6C827T5 Lonicera japonica HOM05D006443 ORTHO05D007797 3.2e-48 195.3 175 59.4
SEGI_28427 Sequoiadendron giganteum HOM05D006443 ORTHO05D007797 5.5e-48 194.5 126 74.6
Actinidia08069 Actinidia chinensis HOM05D006443 ORTHO05D007797 1.3e-44 183.3 106 82.1
SMO196G0120 Selaginella moellendorffii HOM05D006443 ORTHO05D007797 1.1e-43 180.3 124 66.1
Mapoly0036s0054 Marchantia polymorpha HOM05D006443 ORTHO05D007797 2.0e-42 176.0 126 62.7
DCAR_031204 Daucus carota HOM05D006443 ORTHO05D007797 4.5e-42 174.9 108 74.1
Pp3c15_20640 Physcomitrium patens HOM05D006443 ORTHO05D007797 6.0e-39 164.5 126 58.7
vmacro19384 Vaccinium macrocarpon HOM05D006443 ORTHO05D007797 1.3e-38 163.3 126 67.5
ClCG11G013630 Citrullus lanatus HOM05D006443 ORTHO05D007797 5.7e-37 157.9 126 62.7
AagrBONN_evm.TU.Sc2ySwM_228.5822 Anthoceros agrestis HOM05D006443 ORTHO05D007797 1.6e-36 156.4 129 57.4
CBR_g32330 Chara braunii HOM05D006443 ORTHO05D007797 1.5e-34 149.8 134 53.7
CSS0022605 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 7.2e-32 141.0 100 70.0
Hma1.2p1_0065F.1_g035450 Hydrangea macrophylla HOM05D006443 ORTHO05D007797 6.1e-31 137.9 79 78.5
SalBow1G6802 Salvia bowleyana HOM05D006443 ORTHO05D007797 8.2e-28 127.5 72 80.6
SalBow2G0214 Salvia bowleyana HOM05D006443 ORTHO05D007797 8.2e-28 127.5 72 80.6
Dinv17565 Davidia involucrata HOM05D006443 ORTHO05D007797 2.6e-26 122.5 72 83.3
Cre06.g278198 Chlamydomonas reinhardtii HOM05D006443 ORTHO05D007797 1.0e-22 110.5 174 33.9
PRCOL_00005324 Prasinoderma coloniale HOM05D006443 ORTHO05D007797 5.0e-17 91.7 140 37.9
ClCG11G013640 Citrullus lanatus HOM05D006443 ORTHO05D007797 7.2e-16 87.8 45 86.7
CSS0049531 Camellia sinensis var. sinensis HOM05D001731 ORTHO05D000001 3.6e-15 85.5 50 78.0
MCO14G547 Micromonas commoda HOM05D006443 ORTHO05D007797 8.8e-14 80.9 63 54.0
Cfa001627 Carpinus fangiana HOM05D006443 ORTHO05D007797 1.6e-10 70.1 118 38.1
A05p35310 Brassica napus HOM05D003341 ORTHO05D003603 6.7e-06 54.7 138 29.7
BraA05t22341Z Brassica rapa HOM05D003341 ORTHO05D003603 6.7e-06 54.7 138 29.7


User provided reference genes

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