Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017255 Camellia sinensis var. sinensis HOM05D004190 ORTHO05D004692 3.7e-105 384.8 185 100.0
Actinidia37202 Actinidia chinensis HOM05D004190 ORTHO05D004692 4.0e-22 109.0 157 43.3
Sc24g0002450 Simmondsia chinensis HOM05D004190 ORTHO05D004692 3.5e-10 69.3 107 39.3
Gohir.D05G095900 Gossypium hirsutum HOM05D004190 ORTHO05D004692 1.3e-09 67.4 131 33.6
Gorai.009G099200 Gossypium raimondii HOM05D004190 ORTHO05D004692 1.3e-09 67.4 131 33.6
Sc21g0005810 Simmondsia chinensis HOM05D004190 ORTHO05D004692 3.8e-09 65.9 107 33.6
Gohir.A05G095600 Gossypium hirsutum HOM05D004190 ORTHO05D004692 5.0e-09 65.5 127 32.3
Manes.01G173566 Manihot esculenta HOM05D065945 ORTHO05D004692 8.6e-09 64.7 110 38.2
TWI31G1174 Tripterygium wilfordii HOM05D004190 ORTHO05D004692 5.5e-08 62.0 82 37.8
TWI09G1536 Tripterygium wilfordii HOM05D004190 ORTHO05D004692 1.2e-07 60.8 125 35.2
Hund04953 Selenicereus undatus HOM05D004190 ORTHO05D004692 2.1e-07 60.1 46 63.0
Thecc.09G321100 Theobroma cacao HOM05D004190 ORTHO05D004692 4.7e-07 58.9 93 37.6
Atru.chr3.3912 Acer truncatum HOM05D004190 ORTHO05D004692 6.1e-07 58.5 49 53.1
PSO339G5001 Papaver somniferum HOM05D066734 ORTHO05D004692 8.0e-07 58.2 189 30.7
PSO384G2347 Papaver somniferum HOM05D066734 ORTHO05D004692 8.0e-07 58.2 112 38.4
MD11G1107500 Malus domestica HOM05D004190 ORTHO05D004692 1.0e-06 57.8 95 37.9
Aa31LG4G15580 Aethionema arabicum HOM05D004190 ORTHO05D004692 3.0e-06 56.2 103 35.9
Carub.0008s2005 Capsella rubella HOM05D004190 ORTHO05D004692 3.0e-06 56.2 70 41.4
PGR119G1862 Punica granatum HOM05D004190 ORTHO05D004692 3.0e-06 56.2 95 38.9
Potri.009G031100 Populus trichocarpa HOM05D004190 ORTHO05D004692 4.0e-06 55.8 67 41.8
EL10Ac7g16022 Beta vulgaris HOM05D004190 ORTHO05D004692 5.2e-06 55.5 46 56.5
BcaB01g04590 Brassica carinata HOM05D004190 ORTHO05D004692 5.2e-06 55.5 75 40.0
Cpa.g.sc81.141 Carica papaya HOM05D004190 ORTHO05D004692 5.2e-06 55.5 126 29.4
Sopen11g027450 Solanum pennellii HOM05D004190 ORTHO05D004692 5.2e-06 55.5 114 34.2
Eucgr.J02050 Eucalyptus grandis HOM05D004190 ORTHO05D004692 6.8e-06 55.1 86 41.9
THA.LOC104814877 Tarenaya hassleriana HOM05D004190 ORTHO05D004692 6.8e-06 55.1 71 38.0
TAR623G1294 Trochodendron aralioides HOM05D004190 ORTHO05D004692 6.8e-06 55.1 100 34.0
PSO339G5527 Papaver somniferum HOM05D066660 ORTHO05D004692 8.8e-06 54.7 118 35.6
PSO384G5141 Papaver somniferum HOM05D066660 ORTHO05D004692 8.8e-06 54.7 118 35.6


User provided reference genes

Program Settings