Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016773 Camellia sinensis var. sinensis HOM05D002102 ORTHO05D008242 3.0e-140 501.9 269 100.0
Actinidia34700 Actinidia chinensis HOM05D002102 ORTHO05D008242 6.9e-92 341.3 271 71.2
vmacro11020 Vaccinium macrocarpon HOM05D002102 ORTHO05D008242 3.9e-87 325.5 314 65.0
TAR627G1208 Trochodendron aralioides HOM05D002102 ORTHO05D008242 2.0e-83 313.2 270 65.2
Rhsim02G0171500 Rhododendron simsii HOM05D002102 ORTHO05D008242 4.5e-83 312.0 283 66.1
GSVIVG01037088001 Vitis vinifera HOM05D002102 ORTHO05D008242 1.6e-80 303.5 209 75.6
Eucgr.E03887 Eucalyptus grandis HOM05D002102 ORTHO05D008242 1.8e-79 300.1 220 73.2
Nn7g38425 Nelumbo nucifera HOM05D002102 ORTHO05D008242 1.8e-79 300.1 265 65.3
Aqoxy1G01357 Aquilegia oxysepala HOM05D002102 ORTHO05D008242 1.3e-77 293.9 265 60.4
CsaV3_6G053190 Cucumis sativus L. HOM05D002102 ORTHO05D008242 2.1e-77 293.1 267 64.0
Lj4g0016411 Lotus japonicus HOM05D002102 ORTHO05D008242 1.1e-76 290.8 215 69.3
arahy.Tifrunner.gnm1.ann1.1TYS6L Arachis hypogaea HOM05D002102 ORTHO05D008242 6.9e-76 288.1 270 61.9
Sed0010823 Sechium edule HOM05D002102 ORTHO05D008242 6.9e-76 288.1 215 71.6
Cpa.g.sc30.78 Carica papaya HOM05D002102 ORTHO05D008242 9.0e-76 287.7 266 61.7
Lsat_1_v5_gn_8_106940 Lactuca sativa HOM05D002102 ORTHO05D008242 1.5e-75 287.0 276 60.1
Ciclev10016300m.g Citrus clementina HOM05D002102 ORTHO05D008242 2.0e-75 286.6 260 63.8
HanXRQChr09g0257721 Helianthus annuus HOM05D002102 ORTHO05D008242 2.0e-75 286.6 176 84.1
Glyma.08G267700 Glycine max HOM05D002102 ORTHO05D008242 2.6e-75 286.2 263 61.6
QL11p010809 Quercus lobata HOM05D002102 ORTHO05D008242 3.4e-75 285.8 267 64.4
Manes.03G073000 Manihot esculenta HOM05D002102 ORTHO05D008242 4.5e-75 285.4 278 59.7
Phvul.003G275400 Phaseolus vulgaris HOM05D002102 ORTHO05D008242 4.5e-75 285.4 206 72.3
CiPaw.09G140600 Carya illinoinensis HOM05D002102 ORTHO05D008242 1.3e-74 283.9 182 80.2
Peaxi162Scf00313g00048 Petunia axillaris HOM05D002102 ORTHO05D008242 1.3e-74 283.9 266 60.9
PGR004G2223 Punica granatum HOM05D002102 ORTHO05D008242 1.3e-74 283.9 215 68.4
MELO3C006996.2 Cucumis melo HOM05D002102 ORTHO05D008242 2.2e-74 283.1 267 62.5
Glyma.16G094300 Glycine max HOM05D002102 ORTHO05D008242 2.2e-74 283.1 220 67.7
arahy.Tifrunner.gnm1.ann1.N8G6CJ Arachis hypogaea HOM05D002102 ORTHO05D008242 1.9e-73 280.0 272 61.4
EL10Ac4g09967 Beta vulgaris HOM05D002102 ORTHO05D008242 9.3e-73 277.7 225 68.0
Potri.001G074200 Populus trichocarpa HOM05D002102 ORTHO05D008242 2.7e-72 276.2 276 59.4
Oeu023527.1 Olea europaea HOM05D002102 ORTHO05D008242 3.6e-72 275.8 227 67.4
Haze_05188 Corylus avellana HOM05D002102 ORTHO05D008242 4.6e-72 275.4 262 61.1
Cc09_g04620 Coffea canephora HOM05D002102 ORTHO05D008242 1.8e-71 273.5 276 57.2
Gorai.005G268700 Gossypium raimondii HOM05D002102 ORTHO05D008242 1.8e-71 273.5 269 59.9
PGSC0003DMG402011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 3.0e-71 272.7 271 59.8
Thecc.02G001200 Theobroma cacao HOM05D002102 ORTHO05D008242 3.0e-71 272.7 269 61.3
TWI63G1577 Tripterygium wilfordii HOM05D002102 ORTHO05D008242 3.0e-71 272.7 275 58.2
Gohir.D02G240400 Gossypium hirsutum HOM05D002102 ORTHO05D008242 5.1e-71 271.9 270 60.4
Gohir.A03G218300 Gossypium hirsutum HOM05D002102 ORTHO05D008242 8.7e-71 271.2 265 59.6
Lalb_Chr21g0315091 Lupinus albus HOM05D002102 ORTHO05D008242 8.7e-71 271.2 282 56.7
PSO170G6365 Papaver somniferum HOM05D002102 ORTHO05D008242 7.4e-70 268.1 270 56.7
Ca_22534_v3 Cicer arietinum L. HOM05D002102 ORTHO05D008242 9.7e-70 267.7 263 58.6
PSO675G4370 Papaver somniferum HOM05D002102 ORTHO05D008242 1.6e-69 266.9 270 56.7
MD10G1224400 Malus domestica HOM05D002102 ORTHO05D008242 2.8e-69 266.2 280 59.6
CANSAT35G0655 Cannabis sativa HOM05D002102 ORTHO05D008242 4.8e-69 265.4 262 58.4
Sabra01G0052500 Salix brachista HOM05D002102 ORTHO05D008242 4.8e-69 265.4 281 55.2
TPR.G19825 Trifolium pratense HOM05D002102 ORTHO05D008242 6.3e-69 265.0 264 58.7
RcHm_v2.0_Chr5g0021821 Rosa chinensis HOM05D002102 ORTHO05D008242 8.2e-69 264.6 182 75.3
ECA232G0416 Erigeron canadensis HOM05D002102 ORTHO05D008242 1.1e-68 264.2 166 79.5
FvH4_3g13341 Fragaria vesca HOM05D002102 ORTHO05D008242 5.3e-68 261.9 181 75.1
Ah.06g191610 Amaranthus hybridus HOM05D002851 ORTHO05D003084 6.9e-68 261.5 208 68.3
Solyc10g005180.3 Solanum lycopersicum HOM05D002102 ORTHO05D008242 9.1e-68 261.2 255 56.9
Medtr8g070680 Medicago truncatula HOM05D002102 ORTHO05D008242 2.0e-67 260.0 261 57.9
Nitab4.5_0002246g0020 Nicotiana tabacum HOM05D002102 ORTHO05D008242 2.6e-67 259.6 270 57.8
Os01g0798500 Oryza sativa ssp. japonica HOM05D002102 ORTHO05D008242 7.7e-67 258.1 201 68.7
ClCG01G025950 Citrullus lanatus HOM05D002102 ORTHO05D008242 1.3e-66 257.3 228 63.6
Zm00001eb150810 Zea mays HOM05D002102 ORTHO05D008242 2.9e-66 256.1 233 61.8
Carub.0008s0361 Capsella rubella HOM05D002102 ORTHO05D008242 6.5e-66 255.0 186 71.0
Prupe.4G120800 Prunus persica HOM05D002102 ORTHO05D008242 7.2e-65 251.5 181 73.5
Sp2g09460 Schrenkiella parvula HOM05D002102 ORTHO05D008242 7.9e-64 248.1 179 70.9
CARHR178230 Cardamine hirsuta HOM05D002102 ORTHO05D008242 1.4e-63 247.3 281 54.4
BcaB07g30508 Brassica carinata HOM05D002102 ORTHO05D008242 1.8e-63 246.9 184 69.6
BcaC06g31600 Brassica carinata HOM05D002102 ORTHO05D008242 3.9e-63 245.7 285 54.0
FAN16G2960 Fragaria x ananassa HOM05D002102 ORTHO05D008242 3.9e-63 245.7 171 73.7
Thhalv10000983m.g Eutrema salsugineum HOM05D002102 ORTHO05D008242 5.1e-63 245.4 288 52.8
FAN25G3128 Fragaria x ananassa HOM05D002102 ORTHO05D008242 5.1e-63 245.4 170 74.1
FAN11G2372 Fragaria x ananassa HOM05D002102 ORTHO05D008242 1.1e-62 244.2 170 73.5
AT5G44650 Arabidopsis thaliana HOM05D002102 ORTHO05D008242 3.3e-62 242.7 283 52.7
CDE11G0809 Ceratophyllum demersum HOM05D002102 ORTHO05D008242 4.4e-62 242.3 189 64.6
AL8G14900 Arabidopsis lyrata HOM05D002102 ORTHO05D008242 7.4e-62 241.5 279 53.8
BcaC06g34527 Brassica carinata HOM05D002102 ORTHO05D008242 7.4e-62 241.5 283 51.9
A06p47030 Brassica napus HOM05D002102 ORTHO05D008242 7.4e-62 241.5 283 52.3
C07p27540 Brassica napus HOM05D002102 ORTHO05D008242 9.7e-62 241.1 283 51.9
BolC7t43285H Brassica oleracea HOM05D002102 ORTHO05D008242 9.7e-62 241.1 283 51.9
Psat0s2609g0120 Pisum sativum HOM05D002102 ORTHO05D008242 1.3e-61 240.7 275 53.8
Atru.chr10.236 Acer truncatum HOM05D002102 ORTHO05D008242 1.5e-59 233.8 248 56.5
Dinv17885 Davidia involucrata HOM05D002102 ORTHO05D008242 4.5e-59 232.3 146 80.1
Aa31LG9G8520 Aethionema arabicum HOM05D002102 ORTHO05D008242 1.7e-58 230.3 164 68.9
unitig_92.g28193 Utricularia gibba HOM05D002594 ORTHO05D003499 2.2e-58 229.9 206 62.1
BraA06t27576Z Brassica rapa HOM05D002102 ORTHO05D008242 2.9e-58 229.6 303 48.8
Sc24g0002820 Simmondsia chinensis HOM05D002102 ORTHO05D008242 1.4e-57 227.3 246 54.9
PGSC0003DMG401011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 7.2e-57 224.9 155 72.3
COL.COLO4_25027 Corchorus olitorius HOM05D002102 ORTHO05D008242 1.8e-55 220.3 163 70.6
Lj1A1152G38 Lonicera japonica HOM05D002102 ORTHO05D008242 2.3e-55 219.9 147 77.6
Sopen10g001170 Solanum pennellii HOM05D002102 ORTHO05D008242 1.3e-53 214.2 235 51.9
PSO541G0118 Papaver somniferum HOM05D002102 ORTHO05D008242 3.1e-52 209.5 270 50.0
MBI02_g17886_MAGBIO Magnolia biondii HOM05D002102 ORTHO05D008242 3.5e-51 206.1 219 55.7
Migut.M02036 Erythranthe guttata HOM05D002102 ORTHO05D008242 5.0e-50 202.2 188 60.1
DCAR_001256 Daucus carota HOM05D002102 ORTHO05D008242 4.2e-49 199.1 225 52.4
HPP92_001585 Vanilla planifolia HOM05D002102 ORTHO05D008242 1.6e-48 197.2 154 63.6
Nitab4.5_0001299g0100 Nicotiana tabacum HOM05D002102 ORTHO05D008242 1.8e-47 193.7 239 51.0
FAN21G2948 Fragaria x ananassa HOM05D002102 ORTHO05D008242 1.3e-45 187.6 169 61.5
Mapoly0033s0150 Marchantia polymorpha HOM05D002102 ORTHO05D008242 2.4e-44 183.3 222 49.1
Pp3c15_7910 Physcomitrium patens HOM05D002102 ORTHO05D008242 3.5e-43 179.5 252 46.8
Duzib132G0691 Durio zibethinus HOM05D002102 ORTHO05D008242 1.7e-42 177.2 236 50.8
AUR62040994 Chenopodium quinoa HOM05D002102 ORTHO05D008242 5.5e-41 172.2 121 71.9
SGA_v2.0_scaffold423G51451 Striga asiatica HOM05D002102 ORTHO05D008242 9.4e-41 171.4 187 52.4
AUR62042810 Chenopodium quinoa HOM05D002102 ORTHO05D008242 2.7e-40 169.9 122 70.5
ATR0073G005 Amborella trichopoda HOM05D002102 ORTHO05D008242 4.7e-40 169.1 186 50.0
MD05G1242700 Malus domestica HOM05D002102 ORTHO05D004119 5.5e-33 145.6 103 71.8
AagrBONN_evm.TU.Sc2ySwM_368.1584 Anthoceros agrestis HOM05D002102 ORTHO05D008242 7.2e-33 145.2 174 50.0
Actinidia31357 Actinidia chinensis HOM05D002102 ORTHO05D008242 1.0e-31 141.4 85 88.2
Actinidia31356 Actinidia chinensis HOM05D002102 ORTHO05D008242 1.8e-31 140.6 154 58.4
RcHm_v2.0_Chr5g0021891 Rosa chinensis HOM05D002102 ORTHO05D008242 2.3e-31 140.2 88 81.8
HPP92_001768 Vanilla planifolia HOM05D001389 ORTHO05D002892 1.7e-29 134.0 130 52.3
C02p45240 Brassica napus HOM05D002102 ORTHO05D008242 4.9e-29 132.5 144 54.2
Oeu011782.1 Olea europaea HOM05D002102 ORTHO05D008242 6.3e-29 132.1 125 61.6
BolC2t10554H Brassica oleracea HOM05D002102 ORTHO05D008242 1.3e-26 124.4 144 53.5
RcHm_v2.0_Chr5g0021971 Rosa chinensis HOM05D002102 ORTHO05D008242 1.3e-26 124.4 77 81.8
Eucgr.L03440 Eucalyptus grandis HOM05D002102 ORTHO05D008242 1.5e-25 120.9 109 62.4
ATR0109G022 Amborella trichopoda HOM05D002102 ORTHO05D008242 2.1e-24 117.1 85 69.4
SEGI_24162 Sequoiadendron giganteum HOM05D002102 ORTHO05D008242 1.8e-23 114.0 120 53.3
CBR_g21832 Chara braunii HOM05D002102 ORTHO05D008242 1.7e-21 107.5 184 40.2
Hund01844 Selenicereus undatus HOM05D002102 ORTHO05D008242 2.9e-21 106.7 66 75.8
A02p28510 Brassica napus HOM05D002102 ORTHO05D008242 1.1e-20 104.8 128 52.3
Cre06.g280650 Chlamydomonas reinhardtii HOM05D002102 ORTHO05D008242 1.4e-20 104.4 256 34.8
BcaC03g16684 Brassica carinata HOM05D002102 ORTHO05D008242 7.3e-17 92.0 71 71.8
MD05G1242600 Malus domestica HOM05D002102 ORTHO05D008242 1.2e-16 91.3 65 75.4
RcHm_v2.0_Chr5g0021961 Rosa chinensis HOM05D002102 ORTHO05D008242 7.5e-14 82.0 65 60.0
BraA02t07887Z Brassica rapa HOM05D002102 ORTHO05D008242 1.7e-13 80.9 103 46.6
Nitab4.5_0001815g0140 Nicotiana tabacum HOM05D002102 ORTHO05D004119 1.1e-09 68.2 47 63.8
Nitab4.5_0007687g0040 Nicotiana tabacum HOM05D002102 ORTHO05D008242 5.6e-09 65.9 43 67.4
RcHm_v2.0_Chr5g0021881 Rosa chinensis HOM05D002102 ORTHO05D008242 2.8e-08 63.5 85 44.7
RcHm_v2.0_Chr5g0021951 Rosa chinensis HOM05D002102 ORTHO05D008242 6.2e-08 62.4 55 58.2


User provided reference genes

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