Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G8520 LG-9 - View
Aethionema arabicum Aa31LG6G2610 LG-6 - View
Aethionema arabicum Aa31LG6G12270 LG-6 + View
Acer truncatum Atru.chr10.236 chr10 + View
Arabidopsis lyrata AL7G33650 scaffold_7 + View
Arabidopsis lyrata AL4G30920 scaffold_4 + View
Arabidopsis lyrata AL1G45140 scaffold_1 + View
Arabidopsis lyrata AL8G14890 scaffold_8 - View
Aquilegia oxysepala Aqoxy1G01356 CHR01 - View
Arabidopsis thaliana AT2G34910 root hair specific protein BEST Arabidopsis thaliana protein match is: root hair specific 4 (TAIR:AT1G30850.1)%3B Has 43 Blast hits to 43 proteins in 9 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 43%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT1G30850 root hair specific 4 root hair specific 4 (RSH4)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34910.1)%3B Has 45 Blast hits to 43 proteins in 9 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 45%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT4G20190 hypothetical protein unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44660.1)%3B Has 271 Blast hits to 209 proteins in 52 species: Archae - 0%3B Bacteria - 15%3B Metazoa - 63%3B Fungi - 14%3B Plants - 48%3B Viruses - 3%3B Other Eukaryotes - 128 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT5G44650 death domain associated protein Encodes a nucleus-encoded thylakoid protein%2C cooperates with the plastid-encoded Ycf3 protein in photosystem i assembly. Also induces tolerance to multiple environmental stresses and reduces photooxidative damage. CHLOROPLAST PROTEIN-ENHANCING STRESS TOLERANCE (CEST)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: response to water deprivation%2C chloroplast organization%2C hyperosmotic salinity response%2C response to photooxidative stress%2C heat acclimation%3B LOCATED IN: thylakoid%2C chloroplast thylakoid membrane%2C chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC06g31599 ChrC06 - View
Brassica carinata BcaB06g28821 ChrB06 - View
Brassica carinata BcaC02g07749 ChrC02 - View
Brassica carinata BcaB02g09499 ChrB02 - View
Brassica carinata BcaB07g32751 ChrB07 + View
Brassica carinata BcaC09g51330 ChrC09 + View
Brassica carinata BcaC06g34526 ChrC06 - View
Brassica carinata BcaC05g27123 ChrC05 + View
Brassica carinata BcaB04g18204 ChrB04 - View
Brassica napus C07p27540 C07 + View
Brassica napus A08p10940 A08 - View
Brassica napus A09p35310 A09 - View
Brassica napus A01p11930 A01 - View
Brassica napus A02p28510 A02 + View
Brassica napus C05p30080 C05 + View
Brassica oleracea BolC5t31744H C5 + View
Brassica oleracea BolC1t01381H C1 - View
Brassica oleracea BolC8t48191H C8 - View
Brassica oleracea BolC2t10554H C2 + View
Brassica rapa BraA08t33092Z A08 - View
Brassica rapa BraA01t01135Z A01 - View
Brassica rapa BraA09t39060Z A09 - View
Brassica rapa BraA06t27575Z A06 - View
Brassica rapa BraA08t33455Z A08 - View
Cicer arietinum L. Ca_02410_v3 Ca_LG1_v3 + View
Corylus avellana Haze_05188 Similar to Ycf3-interacting protein 1, chloroplastic (Nicotiana tabacum OX%3D4097) 2 + View
Coffea canephora Cc09_g04620 Putative Encodes a nucleus-encoded thylakoid protein, cooperates with the plastid-encoded Ycf3 protein in photosystem i assembly. Also induces tolerance to multiple environmental stresses and reduces photooxidative damage. chr9 + View
Citrus clementina Ciclev10016300m.g scaffold_2 + View
Carpinus fangiana Cfa001161 Cfa01 - View
Cardamine hirsuta CARHR227010 unknown protein Chr7 - View
Cardamine hirsuta CARHR030340 BEST Arabidopsis thaliana protein match is: root hair specific 4 Chr1 + View
Cardamine hirsuta CARHR129060 BEST Arabidopsis thaliana protein match is: root hair specific 4 Chr4 + View
Cardamine hirsuta CARHR178240 unknown protein Chr6 - View
Carya illinoinensis CiPaw.09G140500 Chr09 - View
Citrullus lanatus ClCG01G025950 Encodes a nucleus-encoded thylakoid protein, cooperates with the plastid-encoded Ycf3 protein in photosystem i assembly. Also induces tolerance to multiple environmental stresses and reduces photooxidative damage. LENGTH=280 CG_Chr01 - View
Cucumis melo MELO3C006996.2 Ycf3-interacting protein 1, chloroplastic chr08 + View
Capsella rubella Carub.0001s2919 PTHR33672:SF4 - PROTEIN ROOT HAIR SPECIFIC 4 scaffold_1 + View
Capsella rubella Carub.0004s1659 PTHR33672:SF4 - PROTEIN ROOT HAIR SPECIFIC 4 scaffold_4 + View
Capsella rubella Carub.0008s0360 scaffold_8 - View
Capsella rubella Carub.0007s2095 scaffold_7 + View
Cucumis sativus L. CsaV3_6G053170 Cerebral cavernous malformations 2 protein like chr6 - View
Daucus carota DCAR_001256 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_004361 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv17885 GWHABJS00000002 + View
Erigeron canadensis ECA238G3437 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.E04329 Chr05 - View
Erythranthe guttata Migut.M02035 scaffold_13 - View
Eutrema salsugineum Thhalv10027261m.g scaffold_1 + View
Eutrema salsugineum Thhalv10008294m.g PTHR33672:SF4 - PROTEIN ROOT HAIR SPECIFIC 4 scaffold_5 - View
Eutrema salsugineum Thhalv10017016m.g PTHR33672:SF4 - PROTEIN ROOT HAIR SPECIFIC 4 scaffold_10 + View
Fragaria x ananassa FAN11G2372 Fvb3-4 + View
Fragaria x ananassa FAN21G2948 Fvb3-2 - View
Fragaria x ananassa FAN16G2960 Fvb3-3 - View
Fragaria x ananassa FAN25G3128 Fvb3-1 + View
Fragaria vesca FvH4_3g13340 Fvb3 - View
Glycine max Glyma.09G047700 Gm09 + View
Glycine max Glyma.15G155100 Gm15 + View
Lupinus albus Lalb_Chr18g0051891 Lalb_Chr18 + View
Lotus japonicus Lj6g0016862 chr6 - View
Lonicera japonica Lj1A1152G38 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_8_106940 Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_2_59800 Lsat_1_v8_lg_2 - View
Magnolia biondii MBI02_g17885_MAGBIO AED:0.07 Chr02 - View
Malus domestica MD05G1242600 Encodes a nucleus-encoded thylakoid protein Chr05 + View
Malus domestica MD10G1224400 Encodes a nucleus-encoded thylakoid protein Chr10 + View
Manihot esculenta Manes.03G073000 Chromosome03 + View
Manihot esculenta Manes.16G059800 Chromosome16 + View
Medicago truncatula Medtr2g437600 hypothetical protein chr2 + View
Nicotiana tabacum Nitab4.5_0001815g0140 Unknown Nitab4.5_0001815 - View
Punica granatum PGR042G1552 NC_045130.1 - View
Prunus persica Prupe.4G120700 Pp04 - View
Pisum sativum Psat1g152040 Unknown gene chr1LG6 - View
Populus trichocarpa Potri.003G156700 2.3.3.16 - Citrate synthase (unknown stereospecificity) / Oxaloacetate transacetase Chr03 - View
Populus trichocarpa Potri.001G074200 Chr01 + View
Phaseolus vulgaris Phvul.009G245100 Chr09 - View
Quercus lobata QL11p010809 11 + View
Rosa chinensis RcHm_v2.0_Chr5g0021811 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim02G0171500 chr02 - View
Striga asiatica SGA_v2.0_scaffold423G51451 scaffold423 + View
Salix brachista Sabra03G0113800 GWHAAZH00000003 - View
Salix brachista Sabra01G0052500 GWHAAZH00000001 + View
Solanum lycopersicum Solyc10g005180.3 Ycf3-interacting protein 1, chloroplastic (AHRD V3.3 *** Y3IP1_TOBAC) SL4.0ch10 + View
Solanum lycopersicum Solyc02g082150.1 BnaCnng18720D protein (AHRD V3.3 *** A0A078IGP5_BRANA) SL4.0ch02 - View
Schrenkiella parvula Sp7g18610 ch7-4 - View
Schrenkiella parvula Sp4g17210 PTHR33672:SF4 - PROTEIN ROOT HAIR SPECIFIC 4 ch4-6 + View
Schrenkiella parvula Sp1g26750 PTHR33672:SF4 - PROTEIN ROOT HAIR SPECIFIC 4 ch1-1 + View
Schrenkiella parvula Sp2g09460 ch2-4 + View
Solanum pennellii Sopen02g026810 unknown protein | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400013657 Conserved gene of unknown function ST4.03ch02 - View
Trochodendron aralioides TAR629G0218 group0 - View
Trochodendron aralioides TAR627G1208 group6 + View
Theobroma cacao Thecc.02G001200 Encodes a chloroplast protein that induces tolerance to multiple environmental stresses and reduces photooxidative damage Chromosome_2 + View
Tarenaya hassleriana THA.LOC104811927 uncharacterized protein LOC104811927 NW_010960187.1 - View
Tripterygium wilfordii TWI15G0700 NC_052247.1 - View
Tripterygium wilfordii TWI63G0772 NC_052240.1 - View
Vigna mungo VMungo1309G0754 CM024072.1 + View