Gene: PGR004G2223
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR004G2223
- Transcript Identifier PGR004G2223.01
- Gene Type Coding gene
- Location NC_045131.1 : 31297108-31302072 : positive
Gene Family Information
- ID HOM05D002102
- #Genes/#Species 318/92
- Phylogenetic origin
- ID ORTHO05D008242
- #Genes/#Species 121/87
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031396530.1
- name LOC116207634
- name XM_031540670.1
- id gene-LOC116207634
- uniprot A0A6P8DJH6
Descriptions
- product ycf3-interacting protein 1, chloroplastic
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048564 | IEA | GOA Database | photosystem I assembly | |
| GO:0048564 | IEA | InterPro | photosystem I assembly | |
| GO:0080183 | IEA | GOA Database | response to photooxidative stress | |
| GO:0080183 | IEA | InterPro | response to photooxidative stress | |
| GO:0010286 | ISO | PLAZA Integrative Orthology | heat acclimation | AT5G44650 |
| GO:0042538 | ISO | PLAZA Integrative Orthology | hyperosmotic salinity response | AT5G44650 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT5G44650 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT5G44650 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G44650 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009535 | IEA | GOA Database | chloroplast thylakoid membrane | |
| GO:0009535 | IEA | InterPro | chloroplast thylakoid membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G44650 |
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | AT5G44650 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR040340 | Chloroplast enhancing stress tolerance protein |
| Mapman id | Description |
|---|---|
| 1.1.4.3.6 | Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (Y3IP1) |