Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015576 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 4.5e-180 634.4 307 100.0
CSS0037344 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 1.0e-128 463.8 291 83.2
Dinv29501 Davidia involucrata HOM05D006708 ORTHO05D008321 5.8e-111 404.8 291 71.5
Actinidia02537 Actinidia chinensis HOM05D006708 ORTHO05D008321 1.6e-108 396.7 285 72.3
TAR365G0272 Trochodendron aralioides HOM05D006708 ORTHO05D008321 8.6e-107 391.0 288 70.5
GSVIVG01017693001 Vitis vinifera HOM05D006708 ORTHO05D008321 5.6e-106 388.3 283 71.0
Atru.chr4.3165 Acer truncatum HOM05D006708 ORTHO05D008321 6.8e-104 381.3 285 69.1
Gohir.A02G058800 Gossypium hirsutum HOM05D006708 ORTHO05D008321 1.7e-102 376.7 285 69.5
Gorai.005G073000 Gossypium raimondii HOM05D006708 ORTHO05D008321 8.4e-102 374.4 285 69.1
QL06p014362 Quercus lobata HOM05D006708 ORTHO05D008321 1.9e-101 373.2 293 66.9
Gohir.D02G064500 Gossypium hirsutum HOM05D006708 ORTHO05D008321 4.2e-101 372.1 285 68.8
COL.COLO4_34511 Corchorus olitorius HOM05D006708 ORTHO05D008321 7.1e-101 371.3 285 68.4
Ciclev10005313m.g Citrus clementina HOM05D006708 ORTHO05D008321 2.1e-100 369.8 306 63.1
Thecc.04G313500 Theobroma cacao HOM05D006708 ORTHO05D008321 7.8e-100 367.9 285 67.4
Rhsim12G0000100 Rhododendron simsii HOM05D006708 ORTHO05D007921 1.0e-99 367.5 311 64.0
Duzib151G0010 Durio zibethinus HOM05D006708 ORTHO05D008321 3.0e-99 365.9 326 61.3
Potri.008G206200 Populus trichocarpa HOM05D006708 ORTHO05D008321 3.9e-99 365.5 288 65.3
CSS0031150 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 9.6e-98 360.9 245 79.6
Oeu022711.1 Olea europaea HOM05D006708 ORTHO05D008321 4.8e-97 358.6 286 64.3
Nn3g21927 Nelumbo nucifera HOM05D006708 ORTHO05D008321 1.1e-96 357.5 288 64.6
Lj4g0015836 Lotus japonicus HOM05D006708 ORTHO05D008321 4.0e-96 355.5 288 62.8
Lalb_Chr18g0047341 Lupinus albus HOM05D006708 ORTHO05D008321 4.0e-96 355.5 288 63.5
Haze_12609 Corylus avellana HOM05D006708 ORTHO05D008321 6.9e-96 354.8 280 66.4
Haze_12620 Corylus avellana HOM05D006708 ORTHO05D008321 6.9e-96 354.8 280 66.4
Phvul.003G122200 Phaseolus vulgaris HOM05D006708 ORTHO05D008321 1.2e-95 354.0 292 61.3
arahy.Tifrunner.gnm1.ann1.YU479Z Arachis hypogaea HOM05D006708 ORTHO05D008321 1.5e-95 353.6 288 63.2
VMungo1215G1693 Vigna mungo HOM05D006708 ORTHO05D008321 1.5e-95 353.6 287 62.7
TWI53G0094 Tripterygium wilfordii HOM05D006708 ORTHO05D008321 5.8e-95 351.7 298 61.7
Glyma.17G041000 Glycine max HOM05D006708 ORTHO05D008321 9.9e-95 350.9 288 62.8
PGR031G3511 Punica granatum HOM05D006708 ORTHO05D008321 9.9e-95 350.9 292 61.3
arahy.Tifrunner.gnm1.ann1.H7T0W5 Arachis hypogaea HOM05D006708 ORTHO05D008321 1.3e-94 350.5 288 62.8
Sabra08G0153200 Salix brachista HOM05D006708 ORTHO05D008321 6.4e-94 348.2 277 65.0
Ca_21374_v3 Cicer arietinum L. HOM05D006708 ORTHO05D008321 1.4e-93 347.1 283 62.5
MSTRG.24854 Avicennia marina HOM05D006708 ORTHO05D008321 1.9e-93 346.7 285 63.5
Medtr4g123970 Medicago truncatula HOM05D006708 ORTHO05D008321 2.4e-93 346.3 304 59.2
Lj6A702T41 Lonicera japonica HOM05D006708 ORTHO05D008321 4.2e-93 345.5 303 62.4
Cpa.g.sc146.18 Carica papaya HOM05D006708 ORTHO05D008321 9.3e-93 344.4 292 61.6
FAN17G2628 Fragaria x ananassa HOM05D006708 ORTHO05D008321 1.0e-91 340.9 283 62.9
Peaxi162Scf00164g00315 Petunia axillaris HOM05D006708 ORTHO05D008321 1.0e-91 340.9 282 61.7
MD13G1140300 Malus domestica HOM05D006708 ORTHO05D008321 2.3e-91 339.7 274 64.2
CsaV3_6G000260 Cucumis sativus L. HOM05D006708 ORTHO05D008321 3.0e-91 339.3 288 61.1
FvH4_4g21570 Fragaria vesca HOM05D006708 ORTHO05D008321 3.0e-91 339.3 283 62.9
FAN07G1828 Fragaria x ananassa HOM05D006708 ORTHO05D008321 3.9e-91 339.0 283 62.5
TPR.G12542 Trifolium pratense HOM05D006708 ORTHO05D008321 3.9e-91 339.0 283 61.1
Eucgr.B03960 Eucalyptus grandis HOM05D006708 ORTHO05D008321 8.7e-91 337.8 283 61.5
Nitab4.5_0000745g0080 Nicotiana tabacum HOM05D006708 ORTHO05D008321 1.5e-90 337.0 285 61.8
Psat4g021160 Pisum sativum HOM05D006708 ORTHO05D008321 4.3e-90 335.5 304 57.6
Manes.03G212000 Manihot esculenta HOM05D006708 ORTHO05D008321 7.4e-90 334.7 284 63.0
RcHm_v2.0_Chr4g0427681 Rosa chinensis HOM05D006708 ORTHO05D008321 7.4e-90 334.7 283 62.5
Sp3g05900 Schrenkiella parvula HOM05D006708 ORTHO05D008321 4.8e-89 332.0 286 61.2
FAN12G1816 Fragaria x ananassa HOM05D006708 ORTHO05D008321 8.1e-89 331.3 283 61.8
Aqoxy2G02504 Aquilegia oxysepala HOM05D006708 ORTHO05D008321 1.1e-88 330.9 288 59.0
Sc19g0002530 Simmondsia chinensis HOM05D006708 ORTHO05D008321 1.1e-88 330.9 285 61.4
C03p42560 Brassica napus HOM05D006708 ORTHO05D008321 1.4e-88 330.5 286 59.4
BolC3t16526H Brassica oleracea HOM05D006708 ORTHO05D008321 1.4e-88 330.5 286 59.4
Sed0006346 Sechium edule HOM05D006708 ORTHO05D008321 1.8e-88 330.1 263 64.6
BraA03t12678Z Brassica rapa HOM05D006708 ORTHO05D008321 2.4e-88 329.7 286 59.8
DCAR_023411 Daucus carota HOM05D006708 ORTHO05D008321 2.4e-88 329.7 298 58.4
SalBow2G2621 Salvia bowleyana HOM05D006708 ORTHO05D008321 4.0e-88 328.9 283 61.5
A03p34980 Brassica napus HOM05D006708 ORTHO05D008321 5.3e-88 328.6 286 59.4
THA.LOC104802685 Tarenaya hassleriana HOM05D006708 ORTHO05D008321 5.3e-88 328.6 283 60.8
Cc03_g00080 Coffea canephora HOM05D006708 ORTHO05D008321 7.6e-87 324.7 285 59.6
Cfa014219 Carpinus fangiana HOM05D006708 ORTHO05D008321 9.9e-87 324.3 221 72.9
Thhalv10022298m.g Eutrema salsugineum HOM05D006708 ORTHO05D008321 9.9e-87 324.3 303 57.4
Carub.0003s0647 Capsella rubella HOM05D006708 ORTHO05D008321 2.2e-86 323.2 304 55.9
Aa31LG5G17510 Aethionema arabicum HOM05D006708 ORTHO05D008321 2.9e-86 322.8 297 58.2
Nitab4.5_0001769g0170 Nicotiana tabacum HOM05D006708 ORTHO05D008321 2.9e-86 322.8 280 60.7
AUR62029962 Chenopodium quinoa HOM05D006708 ORTHO05D008321 3.8e-86 322.4 298 57.7
HanXRQChr10g0293331 Helianthus annuus HOM05D006708 ORTHO05D008321 3.8e-86 322.4 299 56.5
Lsat_1_v5_gn_1_39980 Lactuca sativa HOM05D006708 ORTHO05D008321 3.8e-86 322.4 288 59.7
PSO210G5816 Papaver somniferum HOM05D006708 ORTHO05D008321 1.4e-85 320.5 291 58.8
CAN.G305.34 Capsicum annuum HOM05D006708 ORTHO05D008321 1.9e-85 320.1 283 59.0
Migut.A01089 Erythranthe guttata HOM05D006708 ORTHO05D008321 1.9e-85 320.1 285 58.6
PSO761G0290 Papaver somniferum HOM05D006708 ORTHO05D008321 1.9e-85 320.1 291 58.8
Solyc05g053190.3 Solanum lycopersicum HOM05D006708 ORTHO05D008321 1.9e-85 320.1 285 58.6
PGSC0003DMG400027203 Solanum tuberosum HOM05D006708 ORTHO05D008321 1.9e-85 320.1 283 59.4
AL3G18120 Arabidopsis lyrata HOM05D006708 ORTHO05D008321 2.4e-85 319.7 285 60.0
Sopen05g031700 Solanum pennellii HOM05D006708 ORTHO05D008321 7.1e-85 318.2 283 58.7
CANSAT64G0974 Cannabis sativa HOM05D006708 ORTHO05D008321 9.3e-85 317.8 281 59.4
MD16G1135500 Malus domestica HOM05D006708 ORTHO05D008321 2.1e-84 316.6 283 59.7
AT3G06950 Arabidopsis thaliana HOM05D006708 ORTHO05D008321 3.5e-84 315.8 320 55.0
Hund22645 Selenicereus undatus HOM05D006708 ORTHO05D008321 3.5e-84 315.8 281 57.7
EL10Ac3g06239 Beta vulgaris HOM05D006708 ORTHO05D008321 1.3e-83 313.9 299 55.5
CARHR081550 Cardamine hirsuta HOM05D006708 ORTHO05D008321 4.8e-81 305.4 284 57.0
AUR62002543 Chenopodium quinoa HOM05D006708 ORTHO05D008321 4.0e-80 302.4 307 54.7
ClCG06G004170 Citrullus lanatus HOM05D006708 ORTHO05D008321 3.8e-78 295.8 269 58.4
MELO3C021228.2 Cucumis melo HOM05D006708 ORTHO05D008321 1.9e-77 293.5 221 66.1
ECA233G5482 Erigeron canadensis HOM05D006708 ORTHO05D008321 1.9e-77 293.5 259 59.5
HPP92_001944 Vanilla planifolia HOM05D006708 ORTHO05D008321 3.9e-75 285.8 269 56.5
CSS0021077 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 6.7e-75 285.0 289 59.9
ATR0796G062 Amborella trichopoda HOM05D006708 ORTHO05D008321 8.7e-75 284.6 281 56.9
unitig_1.g29359 Utricularia gibba HOM05D006708 ORTHO05D008321 8.7e-75 284.6 266 56.4
Zm00001eb245280 Zea mays HOM05D006708 ORTHO05D008321 5.7e-74 282.0 283 55.5
Hma1.2p1_0013F.1_g007850 Hydrangea macrophylla HOM05D006708 ORTHO05D008321 7.4e-74 281.6 219 68.5
unitig_747.g22054 Utricularia gibba HOM05D006708 ORTHO05D008321 8.5e-70 268.1 262 55.0
Prupe.1G104700 Prunus persica HOM05D006708 ORTHO05D008321 1.6e-65 253.8 205 65.9
SGA_v2.0_scaffold109G31012 Striga asiatica HOM05D006708 ORTHO05D008321 2.4e-64 250.0 205 62.9
Glyma.13G119200 Glycine max HOM05D006708 ORTHO05D008321 1.9e-61 240.4 203 61.1
CiPaw.01G128700 Carya illinoinensis HOM05D006708 ORTHO05D008321 7.7e-55 218.4 183 63.9
AagrBONN_evm.TU.Sc2ySwM_228.1603 Anthoceros agrestis HOM05D006708 ORTHO05D008321 4.7e-44 182.6 271 39.9
Pp3c21_5420 Physcomitrium patens HOM05D006708 ORTHO05D008321 3.0e-43 179.9 281 38.1
Mapoly0209s0002 Marchantia polymorpha HOM05D006708 ORTHO05D008321 5.3e-40 169.1 275 39.6
Rhsim05G0000200 Rhododendron simsii HOM05D006708 ORTHO05D008321 6.5e-38 162.2 127 66.1
SMO361G0559 Selaginella moellendorffii HOM05D006708 ORTHO05D008321 1.1e-37 161.4 261 38.3
SEGI_32206 Sequoiadendron giganteum HOM05D006708 ORTHO05D008321 6.5e-30 135.6 128 53.1
HanXRQChr10g0278271 Helianthus annuus HOM05D006708 ORTHO05D008321 1.5e-26 124.4 178 41.0
CBR_g55386 Chara braunii HOM05D006708 ORTHO05D008321 2.8e-25 120.2 274 31.4
MCO13G233 Micromonas commoda HOM05D006708 ORTHO05D008321 5.6e-21 105.9 202 37.1
Cre13.g591501 Chlamydomonas reinhardtii HOM05D006708 ORTHO05D008321 8.9e-19 98.6 262 30.2
SEGI_02195 Sequoiadendron giganteum HOM05D006708 ORTHO05D008321 3.7e-17 93.2 106 44.3
CSS0050353 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 1.1e-16 91.7 66 72.7
PRCOL_00002295 Prasinoderma coloniale HOM05D006708 ORTHO05D008321 3.4e-10 70.1 102 40.2


User provided reference genes

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