Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015411 Camellia sinensis var. sinensis HOM05D003481 ORTHO05D004001 6.3e-55 217.2 113 100.0
CSS0014471 Camellia sinensis var. sinensis HOM05D003481 ORTHO05D004001 1.0e-36 156.8 101 79.2
Dinv03119 Davidia involucrata HOM05D003481 ORTHO05D004001 3.8e-36 154.8 101 77.2
Actinidia02453 Actinidia chinensis HOM05D003481 ORTHO05D004001 5.5e-35 151.0 100 78.0
Actinidia33646 Actinidia chinensis HOM05D003481 ORTHO05D004001 5.5e-35 151.0 100 78.0
Cfa000748 Carpinus fangiana HOM05D003481 ORTHO05D004001 5.5e-35 151.0 100 75.0
GSVIVG01037972001 Vitis vinifera HOM05D003481 ORTHO05D004001 1.2e-34 149.8 101 75.2
CiPaw.09G149800 Carya illinoinensis HOM05D003481 ORTHO05D004001 1.8e-33 146.0 100 71.0
Hma1.2p1_0410F.1_g147020 Hydrangea macrophylla HOM05D003481 ORTHO05D004001 2.3e-33 145.6 101 72.3
Ciclev10014122m.g Citrus clementina HOM05D003481 ORTHO05D004001 1.2e-32 143.3 100 72.0
RcHm_v2.0_Chr3g0448451 Rosa chinensis HOM05D003481 ORTHO05D004001 1.5e-32 142.9 100 68.0
TAR624G0033 Trochodendron aralioides HOM05D003481 ORTHO05D004001 3.4e-32 141.7 101 72.3
FvH4_6g01010 Fragaria vesca HOM05D003481 ORTHO05D004001 7.5e-32 140.6 100 67.0
FAN02G3168 Fragaria x ananassa HOM05D003481 ORTHO05D004001 7.5e-32 140.6 100 67.0
FAN05G1738 Fragaria x ananassa HOM05D003481 ORTHO05D004001 7.5e-32 140.6 100 67.0
FAN14G4292 Fragaria x ananassa HOM05D003481 ORTHO05D004001 7.5e-32 140.6 100 67.0
MD04G1237800 Malus domestica HOM05D003481 ORTHO05D004001 7.5e-32 140.6 100 68.0
Nitab4.5_0000378g0100 Nicotiana tabacum HOM05D003481 ORTHO05D004001 7.5e-32 140.6 101 71.3
Prupe.6G356900 Prunus persica HOM05D003481 ORTHO05D004001 7.5e-32 140.6 100 67.0
TAR626G0933 Trochodendron aralioides HOM05D003481 ORTHO05D004001 9.8e-32 140.2 101 71.3
vmacro03482 Vaccinium macrocarpon HOM05D003481 ORTHO05D004001 2.8e-31 138.7 101 70.3
EL10Ac3g05104 Beta vulgaris HOM05D003481 ORTHO05D004001 3.7e-31 138.3 101 68.3
FAN09G1882 Fragaria x ananassa HOM05D003481 ORTHO05D004001 1.1e-30 136.7 100 65.0
Nitab4.5_0025882g0010 Nicotiana tabacum HOM05D003481 ORTHO05D004001 1.4e-30 136.3 101 68.3
Rhsim13G0126800 Rhododendron simsii HOM05D003481 ORTHO05D004001 1.8e-30 136.0 122 63.1
QL05p065371 Quercus lobata HOM05D003481 ORTHO05D004001 3.1e-30 135.2 100 69.0
QL08p057617 Quercus lobata HOM05D003481 ORTHO05D004001 3.1e-30 135.2 100 69.0
Solyc02g030110.2 Solanum lycopersicum HOM05D003481 ORTHO05D004001 4.1e-30 134.8 101 67.3
CAN.G306.7 Capsicum annuum HOM05D003481 ORTHO05D004001 5.4e-30 134.4 101 69.3
Glyma.15G192300 Glycine max HOM05D003481 ORTHO05D004001 5.4e-30 134.4 100 68.0
AUR62005919 Chenopodium quinoa HOM05D003481 ORTHO05D004001 7.0e-30 134.0 101 66.3
HanXRQChr04g0119881 Helianthus annuus HOM05D003481 ORTHO05D004001 7.0e-30 134.0 101 67.3
ClCG01G025690 Citrullus lanatus HOM05D003481 ORTHO05D004001 9.2e-30 133.7 101 68.3
Eucgr.K01948 Eucalyptus grandis HOM05D003481 ORTHO05D004001 9.2e-30 133.7 101 65.3
Glyma.09G083800 Glycine max HOM05D003481 ORTHO05D004001 9.2e-30 133.7 100 68.0
Lj6g0004300 Lotus japonicus HOM05D003481 ORTHO05D004001 1.2e-29 133.3 100 67.0
Sopen02g009430 Solanum pennellii HOM05D003481 ORTHO05D004001 1.2e-29 133.3 101 66.3
MD12G1256000 Malus domestica HOM05D003481 ORTHO05D004001 1.6e-29 132.9 102 66.7
Lalb_Chr08g0233181 Lupinus albus HOM05D003481 ORTHO05D004001 2.0e-29 132.5 100 67.0
Aqoxy7G02779 Aquilegia oxysepala HOM05D003481 ORTHO05D004001 4.5e-29 131.3 100 68.0
AUR62028144 Chenopodium quinoa HOM05D003481 ORTHO05D004001 5.9e-29 131.0 100 66.0
Ah.13g071230 Amaranthus hybridus HOM05D003481 ORTHO05D004001 1.0e-28 130.2 101 65.3
CsaV3_6G052920 Cucumis sativus L. HOM05D003481 ORTHO05D004001 1.0e-28 130.2 101 67.3
Gohir.D10G004400 Gossypium hirsutum HOM05D003481 ORTHO05D004001 1.0e-28 130.2 100 72.0
Gorai.011G004800 Gossypium raimondii HOM05D003481 ORTHO05D004001 1.0e-28 130.2 100 72.0
Sed0003597 Sechium edule HOM05D003481 ORTHO05D004001 1.0e-28 130.2 101 66.3
TWI15G0246 Tripterygium wilfordii HOM05D003481 ORTHO05D004001 1.0e-28 130.2 103 68.0
Psat0s4071g0040 Pisum sativum HOM05D003481 ORTHO05D004001 2.9e-28 128.6 100 67.0
CAN.G954.8 Capsicum annuum HOM05D003481 ORTHO05D004001 5.0e-28 127.9 101 66.3
ECA236G0663 Erigeron canadensis HOM05D003481 ORTHO05D004001 5.0e-28 127.9 100 64.0
Lsat_1_v5_gn_7_35621 Lactuca sativa HOM05D003481 ORTHO05D004001 5.0e-28 127.9 100 64.0
Atru.chr8.321 Acer truncatum HOM05D003481 ORTHO05D004001 6.6e-28 127.5 100 67.0
THA.LOC104812894 Tarenaya hassleriana HOM05D003481 ORTHO05D004001 6.6e-28 127.5 101 65.3
COL.COLO4_26841 Corchorus olitorius HOM05D003481 ORTHO05D004001 8.6e-28 127.1 100 69.0
Nitab4.5_0010415g0040 Nicotiana tabacum HOM05D003481 ORTHO05D004001 8.6e-28 127.1 101 65.3
Hund09767 Selenicereus undatus HOM05D003481 ORTHO05D004001 8.6e-28 127.1 101 63.4
MELO3C007016.2 Cucumis melo HOM05D003481 ORTHO05D004001 1.1e-27 126.7 100 67.0
Thecc.06G002800 Theobroma cacao HOM05D003481 ORTHO05D004001 1.1e-27 126.7 101 70.3
Ca_02512_v3 Cicer arietinum L. HOM05D003481 ORTHO05D004001 1.5e-27 126.3 101 65.3
Phvul.009G217900 Phaseolus vulgaris HOM05D003481 ORTHO05D004001 1.5e-27 126.3 100 64.0
arahy.Tifrunner.gnm1.ann1.D6X22R Arachis hypogaea HOM05D003481 ORTHO05D004001 1.9e-27 125.9 100 65.0
Nitab4.5_0002444g0030 Nicotiana tabacum HOM05D003481 ORTHO05D004001 1.9e-27 125.9 101 64.4
Gohir.A10G004400 Gossypium hirsutum HOM05D003481 ORTHO05D004001 2.5e-27 125.6 100 70.0
HanXRQChr06g0183401 Helianthus annuus HOM05D003481 ORTHO05D004001 2.5e-27 125.6 100 63.0
Sc13g0010770 Simmondsia chinensis HOM05D003481 ORTHO05D004001 2.5e-27 125.6 101 63.4
TPR.G22668 Trifolium pratense HOM05D003481 ORTHO05D004001 2.5e-27 125.6 101 66.3
Sed0000926 Sechium edule HOM05D003481 ORTHO05D004001 3.3e-27 125.2 101 64.4
Lj1A1155G48 Lonicera japonica HOM05D003481 ORTHO05D004001 1.2e-26 123.2 79 75.9
Nn4g25046 Nelumbo nucifera HOM05D003481 ORTHO05D004001 1.2e-26 123.2 101 61.4
TWI38G1754 Tripterygium wilfordii HOM05D003481 ORTHO05D004001 1.6e-26 122.9 99 66.7
BcaC09g51402 Brassica carinata HOM05D003481 ORTHO05D004001 2.1e-26 122.5 101 59.4
Medtr2g047908 Medicago truncatula HOM05D003481 ORTHO05D004001 2.1e-26 122.5 100 64.0
Duzib235G1444 Durio zibethinus HOM05D003481 ORTHO05D004001 3.6e-26 121.7 101 66.3
Sabra11G0145500 Salix brachista HOM05D003481 ORTHO05D004001 3.6e-26 121.7 100 64.0
ATR1132G011 Amborella trichopoda HOM05D003481 ORTHO05D004001 4.7e-26 121.3 101 60.4
Duzib160G0577 Durio zibethinus HOM05D003481 ORTHO05D004001 6.1e-26 120.9 101 67.3
Sopen02g018780 Solanum pennellii HOM05D003481 ORTHO05D004001 6.1e-26 120.9 101 61.4
A01p11430 Brassica napus HOM05D003481 ORTHO05D004001 1.0e-25 120.2 101 58.4
Potri.011G154000 Populus trichocarpa HOM05D003481 ORTHO05D004001 1.0e-25 120.2 101 63.4
Aa31LG6G2100 Aethionema arabicum HOM05D003481 ORTHO05D004001 1.4e-25 119.8 102 61.8
BraA01t01089Z Brassica rapa HOM05D003481 ORTHO05D004001 1.4e-25 119.8 101 57.4
Potri.001G442900 Populus trichocarpa HOM05D003481 ORTHO05D004001 3.0e-25 118.6 101 62.4
AL7G34630 Arabidopsis lyrata HOM05D003481 ORTHO05D004001 5.2e-25 117.9 102 59.8
C01p13480 Brassica napus HOM05D003481 ORTHO05D004001 6.8e-25 117.5 101 57.4
BolC1t01321H Brassica oleracea HOM05D003481 ORTHO05D004001 6.8e-25 117.5 101 57.4
A03p51930 Brassica napus HOM05D003481 ORTHO05D004001 1.2e-24 116.7 102 57.8
C07p50430 Brassica napus HOM05D003481 ORTHO05D004001 1.2e-24 116.7 102 57.8
BolC7t45545H Brassica oleracea HOM05D003481 ORTHO05D004001 1.2e-24 116.7 102 57.8
Thhalv10024300m.g Eutrema salsugineum HOM05D003481 ORTHO05D004001 1.2e-24 116.7 102 58.8
BcaNung07226 Brassica carinata HOM05D003481 ORTHO05D004001 1.5e-24 116.3 102 57.8
CDE09G0686 Ceratophyllum demersum HOM05D003481 ORTHO05D004001 2.0e-24 115.9 101 57.4
BcaNung02560 Brassica carinata HOM05D003481 ORTHO05D004001 2.6e-24 115.5 102 56.9
AT4G19490 Arabidopsis thaliana HOM05D003481 ORTHO05D004001 3.4e-24 115.2 106 56.6
Os04g0212200 Oryza sativa ssp. japonica HOM05D003481 ORTHO05D004001 4.4e-24 114.8 101 54.5
BcaNung01774 Brassica carinata HOM05D003481 ORTHO05D004001 5.7e-24 114.4 102 56.9
CARHR226290 Cardamine hirsuta HOM05D003481 ORTHO05D004001 9.8e-24 113.6 102 56.9
Carub.0007s2172 Capsella rubella HOM05D003481 ORTHO05D004001 1.3e-23 113.2 102 55.9
Sp7g18100 Schrenkiella parvula HOM05D003481 ORTHO05D004001 1.7e-23 112.8 102 55.9
Zm00001eb088370 Zea mays HOM05D003481 ORTHO05D004001 2.2e-23 112.5 100 56.0
PSO063G1971 Papaver somniferum HOM05D003481 ORTHO05D004001 4.9e-23 111.3 99 55.6
PSO170G3331 Papaver somniferum HOM05D003481 ORTHO05D004001 4.9e-23 111.3 99 55.6
Zm00001eb419780 Zea mays HOM05D003481 ORTHO05D004001 6.4e-23 110.9 100 56.0
CDE02G2268 Ceratophyllum demersum HOM05D003481 ORTHO05D004001 1.8e-22 109.4 101 55.4
BraA03t14280Z Brassica rapa HOM05D003481 ORTHO05D004001 7.0e-22 107.5 102 56.9
HPP92_026238 Vanilla planifolia HOM05D003481 ORTHO05D004001 9.2e-22 107.1 101 55.4
SEGI_29135 Sequoiadendron giganteum HOM05D003481 ORTHO05D004001 1.6e-21 106.3 104 56.7
DCAR_004311 Daucus carota HOM05D003481 ORTHO05D004001 1.0e-20 103.6 78 64.1
Cc09_g07300 Coffea canephora HOM05D003481 ORTHO05D004001 1.3e-20 103.2 100 51.0
arahy.Tifrunner.gnm1.ann1.DYC2U6 Arachis hypogaea HOM05D003481 ORTHO05D004001 9.5e-19 97.1 79 64.6
Aa31sc55G50 Aethionema arabicum HOM05D003481 ORTHO05D004001 1.1e-17 93.6 81 58.0
SGA_v2.0_scaffold341G49384 Striga asiatica HOM05D003481 ORTHO05D004001 2.3e-17 92.4 88 55.7
Oeu008973.2 Olea europaea HOM05D003481 ORTHO05D004001 4.0e-17 91.7 90 54.4
SHI31590 Sapria himalayana HOM05D003481 ORTHO05D004001 6.8e-17 90.9 80 56.2
Migut.H01305 Erythranthe guttata HOM05D003481 ORTHO05D004001 1.5e-16 89.7 91 52.7
Peaxi162Scf00267g00817 Petunia axillaris HOM05D003481 ORTHO05D004001 2.0e-16 89.4 101 51.5
Haze_05982 Corylus avellana HOM05D003481 ORTHO05D004001 2.6e-16 89.0 52 82.7
SalBow7G3129 Salvia bowleyana HOM05D003481 ORTHO05D004001 2.6e-16 89.0 93 51.6
Mapoly0095s0011 Marchantia polymorpha HOM05D003481 ORTHO05D004001 4.4e-16 88.2 78 56.4
DCAR_001341 Daucus carota HOM05D003481 ORTHO05D004001 7.5e-16 87.4 125 42.4
AagrBONN_evm.TU.Sc2ySwM_228.4333 Anthoceros agrestis HOM05D003481 ORTHO05D004001 8.3e-15 84.0 89 52.8
unitig_21.g20207 Utricularia gibba HOM05D003481 ORTHO05D004001 2.0e-13 79.3 84 50.0
Oeu018810.1 Olea europaea HOM05D003481 ORTHO05D004001 4.6e-13 78.2 79 53.2
Pp3c11_18680 Physcomitrium patens HOM05D003481 ORTHO05D004001 1.9e-11 72.8 103 41.7
SMO137G0352 Selaginella moellendorffii HOM05D003481 ORTHO05D004001 2.5e-11 72.4 62 54.8
MBI19_g43313_MAGBIO Magnolia biondii HOM05D003481 ORTHO05D004001 3.3e-11 72.0 52 65.4
Manes.03G070216 Manihot esculenta HOM05D003481 ORTHO05D004001 7.3e-11 70.9 48 72.9
arahy.Tifrunner.gnm1.ann1.0SF8RD Arachis hypogaea HOM05D003481 ORTHO05D004001 1.2e-10 70.1 52 65.4
vmacro19693 Vaccinium macrocarpon HOM05D003481 ORTHO05D004001 1.6e-10 69.7 45 71.1
vmacro19556 Vaccinium macrocarpon HOM05D003481 ORTHO05D004001 2.3e-09 65.9 45 66.7
arahy.Tifrunner.gnm1.ann1.A6QARX Arachis hypogaea HOM05D003481 ORTHO05D004001 7.5e-08 60.8 47 66.0


User provided reference genes

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