Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014684 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 1.7e-216 756.1 504 100.0
CSS0005424 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 6.6e-205 717.6 504 96.2
Actinidia12077 Actinidia chinensis HOM05D005480 ORTHO05D006735 7.2e-167 591.3 510 80.6
Dinv39906 Davidia involucrata HOM05D005480 ORTHO05D006735 2.0e-161 573.2 511 70.1
Eucgr.H01972 Eucalyptus grandis HOM05D005480 ORTHO05D006735 4.4e-156 555.4 437 75.7
Lj7A20T61 Lonicera japonica HOM05D005480 ORTHO05D006735 7.4e-156 554.7 412 77.7
Lj7A18T44 Lonicera japonica HOM05D005480 ORTHO05D006735 3.4e-153 545.8 420 76.0
Sopen02g034920 Solanum pennellii HOM05D005480 ORTHO05D006735 7.7e-153 544.7 421 77.0
PGSC0003DMG400010074 Solanum tuberosum HOM05D005480 ORTHO05D006735 1.3e-152 543.9 421 77.0
Dinv26753 Davidia involucrata HOM05D005480 ORTHO05D006735 5.5e-151 538.5 331 86.4
Solyc02g090230.4 Solanum lycopersicum HOM05D005480 ORTHO05D006735 5.5e-151 538.5 421 76.2
Rhsim02G0168000 Rhododendron simsii HOM05D005480 ORTHO05D006735 1.4e-149 533.9 396 80.6
CiPaw.01G026500 Carya illinoinensis HOM05D005480 ORTHO05D006735 2.6e-148 529.6 522 69.3
Thecc.01G048100 Theobroma cacao HOM05D005480 ORTHO05D006735 4.4e-148 528.9 430 70.5
DCAR_021432 Daucus carota HOM05D005480 ORTHO05D006735 3.5e-145 519.2 417 73.4
Glyma.01G181500 Glycine max HOM05D005480 ORTHO05D006735 4.5e-145 518.8 431 69.6
Cc07_g05560 Coffea canephora HOM05D005480 ORTHO05D006735 5.9e-145 518.5 422 70.6
QL06p043724 Quercus lobata HOM05D005480 ORTHO05D006735 1.1e-143 514.2 527 70.8
Prupe.7G142300 Prunus persica HOM05D005480 ORTHO05D006735 1.5e-143 513.8 428 70.3
PGR102G0042 Punica granatum HOM05D005480 ORTHO05D006735 2.5e-143 513.1 434 70.5
Gohir.A12G068600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 7.2e-143 511.5 520 69.2
Hma1.2p1_0546F.1_g176180 Hydrangea macrophylla HOM05D005480 ORTHO05D006735 1.6e-142 510.4 433 67.9
MELO3C007529.2 Cucumis melo HOM05D005480 ORTHO05D006735 1.0e-141 507.7 428 67.8
Gohir.D12G090600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 6.7e-141 505.0 424 68.9
Gorai.008G072400 Gossypium raimondii HOM05D005480 ORTHO05D006735 1.2e-140 504.2 424 70.3
Manes.13G130100 Manihot esculenta HOM05D005480 ORTHO05D006735 1.5e-140 503.8 437 71.9
Duzib187G0998 Durio zibethinus HOM05D005480 ORTHO05D006735 4.4e-140 502.3 438 68.0
TPR.G11349 Trifolium pratense HOM05D005480 ORTHO05D006735 5.7e-140 501.9 433 68.4
TAR625G1062 Trochodendron aralioides HOM05D005480 ORTHO05D006735 5.7e-140 501.9 421 68.9
VMungo1215G2543 Vigna mungo HOM05D005480 ORTHO05D006735 9.7e-140 501.1 434 66.6
MD02G1161300 Malus domestica HOM05D005480 ORTHO05D006735 1.7e-139 500.4 426 67.8
CsaV3_6G042900 Cucumis sativus L. HOM05D005480 ORTHO05D006735 2.2e-139 500.0 429 66.4
Migut.H00485 Erythranthe guttata HOM05D005480 ORTHO05D006735 2.8e-139 499.6 545 66.2
Medtr5g018390 Medicago truncatula HOM05D005480 ORTHO05D006735 3.7e-139 499.2 430 69.3
MD15G1275400 Malus domestica HOM05D005480 ORTHO05D006735 1.4e-138 497.3 517 68.1
Peaxi162Scf00993g00022 Petunia axillaris HOM05D005480 ORTHO05D006735 5.3e-138 495.4 389 78.1
MSTRG.23794 Avicennia marina HOM05D005480 ORTHO05D006735 2.0e-137 493.4 511 67.7
TAR381G0420 Trochodendron aralioides HOM05D005480 ORTHO05D006735 2.0e-137 493.4 386 70.5
Duzib147G0741 Durio zibethinus HOM05D005480 ORTHO05D006735 4.5e-137 492.3 522 68.2
Sc03g0001260 Simmondsia chinensis HOM05D005480 ORTHO05D006735 5.9e-137 491.9 417 71.5
Ciclev10025487m.g Citrus clementina HOM05D005480 ORTHO05D006735 1.3e-136 490.7 330 77.3
Phvul.002G022500 Phaseolus vulgaris HOM05D005480 ORTHO05D006735 1.7e-136 490.3 412 72.1
RcHm_v2.0_Chr2g0103771 Rosa chinensis HOM05D005480 ORTHO05D006735 2.9e-136 489.6 424 70.5
Lalb_Chr09g0322931 Lupinus albus HOM05D005480 ORTHO05D006735 3.8e-136 489.2 432 71.5
Potri.007G036600 Populus trichocarpa HOM05D005480 ORTHO05D006735 1.1e-135 487.6 523 67.3
CANSAT01G1679 Cannabis sativa HOM05D005480 ORTHO05D006735 1.6e-134 483.8 433 68.6
Lj2g0021055 Lotus japonicus HOM05D005480 ORTHO05D006735 1.6e-134 483.8 431 69.1
Glyma.11G059700 Glycine max HOM05D005480 ORTHO05D006735 8.0e-134 481.5 417 65.9
Aqoxy5G01417 Aquilegia oxysepala HOM05D005480 ORTHO05D006735 2.0e-132 476.9 429 68.3
Sed0026694 Sechium edule HOM05D005480 ORTHO05D006735 4.4e-132 475.7 429 65.3
arahy.Tifrunner.gnm1.ann1.E9URZA Arachis hypogaea HOM05D005480 ORTHO05D006735 1.7e-131 473.8 421 72.0
Cfa004218 Carpinus fangiana HOM05D005480 ORTHO05D006735 3.1e-130 469.5 391 69.6
vmacro05295 Vaccinium macrocarpon HOM05D005480 ORTHO05D006735 3.5e-129 466.1 366 78.1
ClCG01G016580 Citrullus lanatus HOM05D005480 ORTHO05D006735 5.9e-129 465.3 476 59.2
ECA232G3160 Erigeron canadensis HOM05D005480 ORTHO05D006735 5.9e-129 465.3 447 62.2
FvH4_1g14810 Fragaria vesca HOM05D005480 ORTHO05D006735 5.9e-129 465.3 427 67.2
FAN19G1500 Fragaria x ananassa HOM05D005480 ORTHO05D006735 5.9e-129 465.3 427 67.2
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 7.7e-129 464.9 420 64.8
Nn6g32121 Nelumbo nucifera HOM05D005480 ORTHO05D006735 7.7e-129 464.9 428 66.8
Psat2g164160 Pisum sativum HOM05D005480 ORTHO05D006735 7.7e-129 464.9 419 66.6
FAN23G2977 Fragaria x ananassa HOM05D005480 ORTHO05D006735 8.6e-128 461.5 450 60.0
Hund13586 Selenicereus undatus HOM05D005480 ORTHO05D006735 5.5e-127 458.8 434 65.4
FAN28G0426 Fragaria x ananassa HOM05D005480 ORTHO05D006735 9.5e-127 458.0 306 76.8
HanXRQChr04g0123741 Helianthus annuus HOM05D005480 ORTHO05D006735 3.6e-126 456.1 527 63.4
MBI16_g19897_MAGBIO Magnolia biondii HOM05D005480 ORTHO05D006735 4.7e-126 455.7 414 63.8
FAN26G2127 Fragaria x ananassa HOM05D005480 ORTHO05D006735 2.0e-124 450.3 428 65.7
PSO170G5089 Papaver somniferum HOM05D005480 ORTHO05D006735 7.5e-124 448.4 427 67.9
THA.LOC104819823 Tarenaya hassleriana HOM05D005480 ORTHO05D006735 7.5e-124 448.4 434 66.8
Sp7g34650 Schrenkiella parvula HOM05D005480 ORTHO05D006735 9.8e-124 448.0 446 64.6
Nitab4.5_0001014g0070 Nicotiana tabacum HOM05D005480 ORTHO05D006735 4.9e-123 445.7 377 73.7
PSO210G7251 Papaver somniferum HOM05D005480 ORTHO05D006735 8.3e-123 444.9 423 67.8
SGA_v2.0_scaffold15G07231 Striga asiatica HOM05D005480 ORTHO05D006735 1.8e-122 443.7 418 67.7
Nitab4.5_0000108g0300 Nicotiana tabacum HOM05D005480 ORTHO05D006735 2.0e-121 440.3 419 68.5
CAN.G836.34 Capsicum annuum HOM05D005480 ORTHO05D006735 1.0e-120 438.0 377 72.1
COL.COLO4_11327 Corchorus olitorius HOM05D005480 ORTHO05D006735 1.7e-120 437.2 342 71.3
Lsat_1_v5_gn_4_179460 Lactuca sativa HOM05D005480 ORTHO05D006735 6.6e-120 435.3 522 61.1
Oeu003952.2 Olea europaea HOM05D005480 ORTHO05D006735 1.1e-119 434.5 672 46.7
Carub.0007s0332 Capsella rubella HOM05D005480 ORTHO05D006735 1.2e-118 431.0 430 65.8
AT4G37130 Arabidopsis thaliana HOM05D005480 ORTHO05D006735 2.1e-118 430.3 424 66.7
Thhalv10025060m.g Eutrema salsugineum HOM05D005480 ORTHO05D006735 3.0e-117 426.4 428 64.3
AL7G13910 Arabidopsis lyrata HOM05D005480 ORTHO05D006735 4.0e-117 426.0 424 66.3
Aa31LG6G13860 Aethionema arabicum HOM05D005480 ORTHO05D006735 4.9e-115 419.1 332 69.0
ATR0733G143 Amborella trichopoda HOM05D005480 ORTHO05D006735 2.0e-113 413.7 419 58.5
CDE01G0732 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 2.0e-113 413.7 433 60.7
CARHR245380 Cardamine hirsuta HOM05D005480 ORTHO05D006735 4.6e-113 412.5 336 69.0
Sabra07G0032600 Salix brachista HOM05D005480 ORTHO05D006735 3.0e-112 409.8 395 62.3
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 1.9e-111 407.1 278 77.0
A01p01950 Brassica napus HOM05D005480 ORTHO05D006735 3.3e-111 406.4 429 62.7
BraA01t00184Z Brassica rapa HOM05D005480 ORTHO05D006735 3.3e-111 406.4 429 62.5
unitig_899.g14972 Utricularia gibba HOM05D005480 ORTHO05D006735 4.4e-108 396.0 557 50.4
CDE02G2721 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 1.7e-107 394.0 290 69.7
AUR62003828 Chenopodium quinoa HOM05D005480 ORTHO05D006735 1.4e-106 391.0 382 64.7
SHI08751 Sapria himalayana HOM05D005480 ORTHO05D006735 3.2e-106 389.8 407 61.9
BolC1t00204H Brassica oleracea HOM05D005480 ORTHO05D006735 3.5e-105 386.3 427 62.8
C01p02120 Brassica napus HOM05D005480 ORTHO05D006735 2.3e-104 383.6 429 62.2
BcaNung03510 Brassica carinata HOM05D005480 ORTHO05D006735 5.0e-104 382.5 436 59.4
Haze_15193 Corylus avellana HOM05D005480 ORTHO05D006735 1.1e-103 381.3 340 69.1
GSVIVG01005079001 Vitis vinifera HOM05D005480 ORTHO05D006735 5.6e-103 379.0 239 81.6
BcaB03g12366 Brassica carinata HOM05D005480 ORTHO05D006735 7.3e-103 378.6 436 56.7
BolC3t20222H Brassica oleracea HOM05D005480 ORTHO05D006735 6.8e-101 372.1 426 59.6
A08p22500 Brassica napus HOM05D005480 ORTHO05D006735 8.9e-101 371.7 430 54.9
Ca_24802_v3 Cicer arietinum L. HOM05D005480 ORTHO05D006735 8.9e-101 371.7 355 67.6
BraA08t34205Z Brassica rapa HOM05D005480 ORTHO05D006735 2.0e-100 370.5 428 55.1
AUR62001975 Chenopodium quinoa HOM05D005480 ORTHO05D006735 4.1e-98 362.8 357 63.0
BcaC01g00434 Brassica carinata HOM05D005480 ORTHO05D006735 3.5e-97 359.8 435 57.7
C03p79710 Brassica napus HOM05D005480 ORTHO05D006735 3.5e-97 359.8 435 57.7
Os09g0453500 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 4.7e-94 349.4 427 56.2
arahy.Tifrunner.gnm1.ann1.HXIH5S Arachis hypogaea HOM05D005480 ORTHO05D006735 6.2e-94 349.0 338 63.0
Lalb_Chr05g0213141 Lupinus albus HOM05D005480 ORTHO05D006735 4.9e-91 339.3 251 70.9
Zm00001eb314700 Zea mays HOM05D005480 ORTHO05D006735 1.5e-84 317.8 432 53.0
Zm00001eb100530 Zea mays HOM05D005480 ORTHO05D006735 2.4e-82 310.5 423 51.1
BcaB03g12364 Brassica carinata HOM05D005480 ORTHO05D006735 1.6e-81 307.8 436 49.5
AagrBONN_evm.TU.Sc2ySwM_117.4106 Anthoceros agrestis HOM05D005480 ORTHO05D006735 2.3e-80 303.9 341 52.5
SGA_v2.0_scaffold135G34951 Striga asiatica HOM05D005480 ORTHO05D006735 2.1e-70 270.8 389 49.9
Mapoly0027s0041 Marchantia polymorpha HOM05D005480 ORTHO05D006735 7.1e-66 255.8 405 41.7
Ah.03g144040 Amaranthus hybridus HOM05D005480 ORTHO05D006735 2.1e-65 254.2 227 59.9
Pp3c24_6760 Physcomitrium patens HOM05D005480 ORTHO05D006735 3.3e-63 246.9 411 44.0
SEGI_40098 Sequoiadendron giganteum HOM05D005480 ORTHO05D006735 3.3e-63 246.9 213 61.0
HPP92_016040 Vanilla planifolia HOM05D005480 ORTHO05D006735 6.2e-62 242.7 205 57.6
Os03g0765400 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 2.0e-52 211.1 354 42.1
CBR_g66690 Chara braunii HOM05D005480 ORTHO05D006735 5.5e-50 203.0 431 38.1
Psat5g148720 Pisum sativum HOM05D005480 ORTHO05D006735 1.7e-43 181.4 132 75.0
Mapoly0016s0112 Marchantia polymorpha HOM05D005480 ORTHO05D006735 1.1e-39 168.7 339 37.2
Cpa.g.c44085 Carica papaya HOM05D005480 ORTHO05D006735 1.1e-37 162.2 194 59.8
Sabra07G0033400 Salix brachista HOM05D005480 ORTHO05D006735 1.2e-28 132.1 204 57.4
Sabra07G0033100 Salix brachista HOM05D005480 ORTHO05D006735 7.7e-28 129.4 204 56.4
Sabra07G0032900 Salix brachista HOM05D005480 ORTHO05D006735 1.3e-27 128.6 204 55.9
HPP92_016039 Vanilla planifolia HOM05D005480 ORTHO05D006735 8.5e-27 125.9 70 87.1
Ah.03g144030 Amaranthus hybridus HOM05D005480 ORTHO05D006735 8.8e-16 89.4 84 58.3
PRCOL_00002206 Prasinoderma coloniale HOM05D005480 ORTHO05D006735 1.4e-13 82.0 332 26.5
C04p28170 Brassica napus HOM05D005480 ORTHO05D006735 1.0e-11 75.9 98 48.0
BolC4t24360H Brassica oleracea HOM05D005480 ORTHO05D006735 1.0e-11 75.9 98 48.0
BcaC02g10502 Brassica carinata HOM05D005480 ORTHO05D006735 5.0e-11 73.6 62 61.3
C04p33290 Brassica napus HOM05D005480 ORTHO05D006735 4.0e-08 63.9 112 41.1
BolC4t24894H Brassica oleracea HOM05D005480 ORTHO05D006735 5.7e-07 60.1 99 43.4
Lalb_Chr05g0213591 Lupinus albus HOM05D005480 ORTHO05D006735 9.8e-07 59.3 36 80.6
CBR_g66696 Chara braunii HOM05D005480 ORTHO05D006735 1.3e-06 58.9 217 31.3
Cre16.g685217 Chlamydomonas reinhardtii HOM05D005480 ORTHO05D006735 1.7e-06 58.5 425 26.6


User provided reference genes

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