Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 8.5e-70 268.1 309 100.0
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 6.2e-36 155.6 279 86.7
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 1.2e-34 151.4 306 76.8
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 1.5e-34 151.0 306 68.0
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 9.8e-34 148.3 306 65.4
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 3.2e-32 143.3 128 100.0
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 4.1e-32 142.9 279 82.8
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 7.0e-32 142.1 279 82.1
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 6.0e-31 139.0 279 84.2
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 1.0e-30 138.3 306 78.1
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 2.3e-30 137.1 277 85.2
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 2.3e-30 137.1 305 72.1
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 3.9e-30 136.3 305 72.1
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 1.5e-29 134.4 279 84.2
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 2.5e-29 133.7 306 74.8
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 2.5e-29 133.7 306 76.8
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 5.6e-29 132.5 307 78.5
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 5.6e-29 132.5 279 81.7
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 7.3e-29 132.1 306 78.1
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 1.2e-28 131.3 278 82.7
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 1.2e-28 131.3 275 80.7
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 2.8e-28 130.2 306 78.8
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 2.8e-28 130.2 279 83.9
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 4.7e-28 129.4 306 76.8
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 4.7e-28 129.4 278 82.7
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 4.7e-28 129.4 279 81.0
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 4.7e-28 129.4 278 82.4
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 1.1e-27 128.3 279 78.1
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 1.4e-27 127.9 305 73.1
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 1.8e-27 127.5 278 83.5
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 3.1e-27 126.7 278 80.2
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 3.1e-27 126.7 277 80.5
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 6.8e-27 125.6 279 80.6
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 6.8e-27 125.6 280 80.7
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 1.2e-26 124.8 295 80.7
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 1.2e-26 124.8 279 81.7
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 1.5e-26 124.4 276 84.1
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 1.5e-26 124.4 277 80.9
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 1.5e-26 124.4 279 79.6
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 2.6e-26 123.6 279 80.3
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 2.6e-26 123.6 278 80.6
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 5.8e-26 122.5 279 82.8
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 7.5e-26 122.1 277 81.6
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.3e-25 121.3 273 81.0
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 1.7e-25 120.9 305 76.1
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 1.7e-25 120.9 305 76.1
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 1.7e-25 120.9 305 68.9
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 2.9e-25 120.2 303 74.6
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 4.9e-25 119.4 307 73.6
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 4.9e-25 119.4 305 75.4
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 6.4e-25 119.0 306 69.6
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 6.4e-25 119.0 276 83.3
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 1.4e-24 117.9 279 81.0
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 1.4e-24 117.9 279 80.6
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 1.4e-24 117.9 280 79.6
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 1.4e-24 117.9 280 80.4
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 1.4e-24 117.9 280 80.0
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 1.9e-24 117.5 276 83.0
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 1.9e-24 117.5 305 75.1
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 1.9e-24 117.5 306 72.2
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 1.9e-24 117.5 279 82.1
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 2.4e-24 117.1 305 74.1
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 2.4e-24 117.1 305 72.8
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 2.4e-24 117.1 303 76.6
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 5.4e-24 115.9 305 73.8
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 7.1e-24 115.5 277 82.7
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 7.1e-24 115.5 277 82.7
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 9.2e-24 115.2 279 79.2
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 9.2e-24 115.2 279 79.2
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 1.6e-23 114.4 278 79.5
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 1.6e-23 114.4 305 74.4
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 2.1e-23 114.0 303 72.3
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 2.7e-23 113.6 308 75.3
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 7.8e-23 112.1 273 79.1
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 1.3e-22 111.3 279 79.6
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 2.3e-22 110.5 276 81.2
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 8.6e-22 108.6 306 75.2
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 1.1e-21 108.2 299 45.8
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 1.5e-21 107.8 276 80.4
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 4.3e-21 106.3 305 72.8
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 4.3e-21 106.3 64 75.0
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 5.6e-21 105.9 305 75.1
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 7.3e-21 105.5 64 75.0
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 3.6e-20 103.2 272 46.3
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 4.7e-20 102.8 279 78.1
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 4.0e-19 99.8 66 69.7
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 6.8e-19 99.0 320 63.1
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 2.6e-18 97.1 279 65.6
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 9.9e-18 95.1 57 75.4
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 1.3e-17 94.7 299 70.6
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 2.2e-17 94.0 277 77.6
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 4.9e-17 92.8 296 64.5
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 4.9e-17 92.8 299 63.2
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 4.9e-17 92.8 60 70.0
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 6.4e-17 92.4 296 63.9
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 1.4e-16 91.3 62 61.3
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 5.4e-16 89.4 62 62.9
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 9.2e-16 88.6 298 61.7
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 2.7e-15 87.0 296 63.2
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 5.1e-14 82.8 63 57.1
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 5.1e-14 82.8 63 57.1
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 6.6e-14 82.4 63 57.1
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 6.6e-14 82.4 63 57.1
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.5e-13 80.5 78 56.4
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 4.3e-13 79.7 65 53.8
vmacro17159 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 8.1e-12 75.5 249 28.5
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 2.4e-11 73.9 46 76.1
Actinidia20590 Actinidia chinensis HOM05D006835 ORTHO05D008587 1.5e-10 71.2 39 84.6
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 1.3e-09 68.2 264 36.7
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 2.4e-08 63.9 252 79.4
SEGI_18890 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 4.2e-08 63.2 42 64.3
vmacro17002 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 6.0e-07 59.3 32 87.5
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 7.8e-07 58.9 64 45.3
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 1.0e-06 58.5 65 41.5
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 1.0e-06 58.5 250 78.8
FAN09G1770 Fragaria x ananassa HOM05D005956 ORTHO05D007197 6.6e-06 55.8 62 43.5


User provided reference genes

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