Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014289 Camellia sinensis var. sinensis HOM05D003438 ORTHO05D004235 1.0e-257 892.9 440 100.0
vmacro10455 Vaccinium macrocarpon HOM05D003438 ORTHO05D004235 6.4e-188 661.0 426 77.2
Rhsim09G0118400 Rhododendron simsii HOM05D003438 ORTHO05D004235 1.1e-179 633.6 427 75.2
Haze_11830 Corylus avellana HOM05D003438 ORTHO05D004235 2.5e-160 569.3 424 64.9
GSVIVG01010139001 Vitis vinifera HOM05D003438 ORTHO05D004235 2.5e-160 569.3 423 67.8
Cfa008813 Carpinus fangiana HOM05D003438 ORTHO05D004235 3.3e-160 568.9 424 65.3
Actinidia07752 Actinidia chinensis HOM05D003438 ORTHO05D004235 2.2e-159 566.2 408 70.8
MD16G1052600 Malus domestica HOM05D003438 ORTHO05D004235 2.8e-159 565.8 421 67.2
TAR629G1044 Trochodendron aralioides HOM05D003438 ORTHO05D004235 8.5e-156 554.3 426 62.4
Ciclev10030492m.g Citrus clementina HOM05D003438 ORTHO05D004235 1.4e-155 553.5 443 61.4
Dinv16582 Davidia involucrata HOM05D003438 ORTHO05D004235 3.2e-155 552.4 374 74.1
Prupe.1G298000 Prunus persica HOM05D003438 ORTHO05D004235 6.1e-154 548.1 423 65.5
Potri.010G135500 Populus trichocarpa HOM05D003438 ORTHO05D004235 1.0e-153 547.4 425 64.0
FvH4_4g28800 Fragaria vesca HOM05D003438 ORTHO05D004235 2.3e-153 546.2 444 61.5
Atru.chr11.1518 Acer truncatum HOM05D003438 ORTHO05D004235 1.5e-152 543.5 425 64.2
Cc11_g11300 Coffea canephora HOM05D003438 ORTHO05D004235 5.7e-152 541.6 421 62.9
Sabra10G0104100 Salix brachista HOM05D003438 ORTHO05D004235 7.4e-152 541.2 444 60.8
FAN17G0827 Fragaria x ananassa HOM05D003438 ORTHO05D004235 2.2e-151 539.7 452 60.6
FAN12G2600 Fragaria x ananassa HOM05D003438 ORTHO05D004235 1.1e-150 537.3 452 60.2
RcHm_v2.0_Chr4g0436941 Rosa chinensis HOM05D003438 ORTHO05D004235 1.1e-150 537.3 444 61.0
DCAR_023734 Daucus carota HOM05D003438 ORTHO05D004235 1.4e-150 537.0 427 62.5
Duzib251G0072 Durio zibethinus HOM05D003438 ORTHO05D004235 3.1e-150 535.8 444 60.8
FAN07G2974 Fragaria x ananassa HOM05D003438 ORTHO05D004235 4.1e-150 535.4 452 60.0
Thecc.02G318900 Theobroma cacao HOM05D003438 ORTHO05D004235 4.5e-149 531.9 442 59.7
Manes.14G092500 Manihot esculenta HOM05D003438 ORTHO05D004235 2.5e-147 526.2 427 61.1
TWI75G0189 Tripterygium wilfordii HOM05D003438 ORTHO05D004235 7.9e-146 521.2 443 58.7
Sed0018972 Sechium edule HOM05D003438 ORTHO05D004235 1.0e-145 520.8 444 58.6
Gohir.A03G107400 Gossypium hirsutum HOM05D003438 ORTHO05D004235 1.8e-145 520.0 444 59.0
Gorai.005G148400 Gossypium raimondii HOM05D003438 ORTHO05D004235 1.1e-144 517.3 438 59.1
Nn4g23588 Nelumbo nucifera HOM05D003438 ORTHO05D004235 1.3e-143 513.8 436 57.8
Medtr8g069840 Medicago truncatula HOM05D003438 ORTHO05D004235 1.7e-143 513.5 421 60.3
Glyma.15G276800 Glycine max HOM05D003438 ORTHO05D004235 5.9e-141 505.0 421 61.0
CsaV3_5G033620 Cucumis sativus L. HOM05D003438 ORTHO05D004235 6.5e-140 501.5 442 57.5
CANSAT64G0670 Cannabis sativa HOM05D003438 ORTHO05D004235 4.2e-139 498.8 452 55.8
Lj4g0011234 Lotus japonicus HOM05D003438 ORTHO05D004235 1.2e-138 497.3 422 58.8
MELO3C012178.2 Cucumis melo HOM05D003438 ORTHO05D004235 2.1e-138 496.5 442 56.6
Cc11_g11330 Coffea canephora HOM05D003438 ORTHO05D004235 2.7e-138 496.1 424 59.0
CAN.G263.2 Capsicum annuum HOM05D003438 ORTHO05D004235 1.0e-137 494.2 420 58.6
arahy.Tifrunner.gnm1.ann1.2XHE7W Arachis hypogaea HOM05D003438 ORTHO05D004235 2.3e-137 493.0 420 58.6
AUR62007840 Chenopodium quinoa HOM05D003438 ORTHO05D004235 2.3e-137 493.0 444 54.7
Nitab4.5_0000591g0100 Nicotiana tabacum HOM05D003438 ORTHO05D004235 8.8e-137 491.1 419 58.5
SalBow8G3833 Salvia bowleyana HOM05D003438 ORTHO05D004235 1.5e-136 490.3 452 55.3
Eucgr.G02402 Eucalyptus grandis HOM05D003438 ORTHO05D004235 2.0e-136 490.0 428 56.3
AUR62003034 Chenopodium quinoa HOM05D003438 ORTHO05D004235 2.6e-136 489.6 425 56.7
PGR119G1138 Punica granatum HOM05D003438 ORTHO05D004235 2.6e-136 489.6 422 58.1
HanXRQChr16g0528311 Helianthus annuus HOM05D003438 ORTHO05D004235 7.4e-136 488.0 421 56.1
Nitab4.5_0000149g0230 Nicotiana tabacum HOM05D003438 ORTHO05D004235 9.7e-136 487.6 421 58.9
CiPaw.05G119100 Carya illinoinensis HOM05D003438 ORTHO05D004235 3.7e-135 485.7 425 58.1
arahy.Tifrunner.gnm1.ann1.KJ79M0 Arachis hypogaea HOM05D003438 ORTHO05D004235 4.8e-135 485.3 412 59.0
Sopen04g001190 Solanum pennellii HOM05D003438 ORTHO05D004235 3.1e-134 482.6 420 57.1
QL03p047145 Quercus lobata HOM05D003438 ORTHO05D004235 4.1e-134 482.3 613 43.7
PSO478G2917 Papaver somniferum HOM05D003438 ORTHO05D004235 1.2e-133 480.7 423 56.3
PSO017G4740 Papaver somniferum HOM05D003438 ORTHO05D004235 1.6e-133 480.3 423 56.0
Sc04g0007220 Simmondsia chinensis HOM05D003438 ORTHO05D004235 1.0e-132 477.6 425 56.7
SGA_v2.0_scaffold16G07841 Striga asiatica HOM05D003438 ORTHO05D004235 5.0e-132 475.3 413 56.9
THA.LOC104821983 Tarenaya hassleriana HOM05D003438 ORTHO05D004235 6.5e-132 474.9 441 54.0
EL10Ac6g14628 Beta vulgaris HOM05D003438 ORTHO05D004235 1.5e-131 473.8 422 55.9
Ah.12g061010 Amaranthus hybridus HOM05D003438 ORTHO05D004235 9.4e-131 471.1 426 55.2
Hma1.2p1_0762F.1_g214440 Hydrangea macrophylla HOM05D003438 ORTHO05D004235 4.7e-130 468.8 342 68.1
Hma1.2p1_0762F.1_g214450 Hydrangea macrophylla HOM05D003438 ORTHO05D004235 4.7e-130 468.8 342 68.1
Lj3C1025G4 Lonicera japonica HOM05D003438 ORTHO05D004235 4.7e-130 468.8 421 57.5
Aa31sc12G150 Aethionema arabicum HOM05D003438 ORTHO05D004235 1.0e-129 467.6 424 54.0
A02p15460 Brassica napus HOM05D003438 ORTHO05D004235 2.6e-128 463.0 421 54.9
BraA02t06607Z Brassica rapa HOM05D003438 ORTHO05D004235 2.6e-128 463.0 421 54.9
Carub.0002s1552 Capsella rubella HOM05D003438 ORTHO05D004235 3.4e-128 462.6 420 55.5
Migut.L01140 Erythranthe guttata HOM05D003438 ORTHO05D004235 3.4e-128 462.6 422 55.2
AT1G68890 Arabidopsis thaliana HOM05D003438 ORTHO05D004235 4.4e-128 462.2 421 54.6
Thhalv10017999m.g Eutrema salsugineum HOM05D003438 ORTHO05D004235 4.4e-128 462.2 424 54.0
CARHR061750 Cardamine hirsuta HOM05D003438 ORTHO05D004235 7.5e-128 461.5 435 53.1
ATR0691G173 Amborella trichopoda HOM05D003438 ORTHO05D004235 9.7e-128 461.1 427 52.9
BcaB05g24430 Brassica carinata HOM05D003438 ORTHO05D004235 1.3e-127 460.7 424 54.7
CDE02G1987 Ceratophyllum demersum HOM05D003438 ORTHO05D004235 2.2e-127 459.9 442 52.3
BolC2t08622H Brassica oleracea HOM05D003438 ORTHO05D004235 2.8e-127 459.5 441 53.3
Sp5g24020 Schrenkiella parvula HOM05D003438 ORTHO05D004235 1.4e-126 457.2 441 53.1
ECA234G3211 Erigeron canadensis HOM05D003438 ORTHO05D004235 2.4e-126 456.4 419 54.2
C02p25570 Brassica napus HOM05D003438 ORTHO05D004235 2.2e-124 449.9 442 52.7
Oeu027415.2 Olea europaea HOM05D003438 ORTHO05D004235 6.5e-124 448.4 419 54.4
Hund25139 Selenicereus undatus HOM05D003438 ORTHO05D004235 8.5e-124 448.0 374 57.0
unitig_699.g19901 Utricularia gibba HOM05D003438 ORTHO05D004235 1.6e-122 443.7 419 53.9
Lsat_1_v5_gn_4_21341 Lactuca sativa HOM05D003438 ORTHO05D004235 8.8e-121 438.0 420 51.4
Psat4g113520 Pisum sativum HOM05D003438 ORTHO05D004235 2.4e-118 429.9 390 57.4
ClCG05G023390 Citrullus lanatus HOM05D003438 ORTHO05D004235 5.0e-116 422.2 373 58.2
Zm00001eb245370 Zea mays HOM05D003438 ORTHO05D004235 1.6e-114 417.2 441 47.4
VMungo1080G0632 Vigna mungo HOM05D003438 ORTHO05D004235 5.2e-113 412.1 341 61.0
Lalb_Chr16g0392021 Lupinus albus HOM05D003438 ORTHO05D004235 1.3e-111 407.5 340 60.6
Ca_22508_v3 Cicer arietinum L. HOM05D003438 ORTHO05D004235 4.9e-111 405.6 339 61.4
MSTRG.795 Avicennia marina HOM05D003438 ORTHO05D004235 2.4e-110 403.3 359 56.3
COL.COLO4_27762 Corchorus olitorius HOM05D003438 ORTHO05D004235 4.5e-109 399.1 416 50.2
MBI14_g11750_MAGBIO Magnolia biondii HOM05D003438 ORTHO05D004235 7.8e-109 398.3 361 55.7
Aqoxy3G00578 Aquilegia oxysepala HOM05D005717 ORTHO05D004235 1.2e-106 391.0 342 56.7
Rhsim13G0143500 Rhododendron simsii HOM05D003438 ORTHO05D004235 3.1e-105 386.3 334 63.2
SEGI_33974 Sequoiadendron giganteum HOM05D003438 ORTHO05D004235 1.5e-99 367.5 468 42.3
Gohir.D02G132466 Gossypium hirsutum HOM05D003438 ORTHO05D004235 1.5e-88 330.9 271 59.8
Peaxi162Scf00396g01316 Petunia axillaris HOM05D003438 ORTHO05D004235 1.5e-83 314.3 271 57.9
PGSC0003DMG400001917 Solanum tuberosum HOM05D003438 ORTHO05D004235 1.5e-80 304.3 267 58.4
Cpa.g.sc53.1 Carica papaya HOM05D003438 ORTHO05D004235 3.4e-80 303.1 252 60.3
HPP92_019404 Vanilla planifolia HOM05D003438 ORTHO05D004235 2.7e-77 293.5 304 49.0
Os02g0581500 Oryza sativa ssp. japonica HOM05D003438 ORTHO05D004235 1.7e-76 290.8 272 54.0
SMO270G0066 Selaginella moellendorffii HOM05D003438 ORTHO05D004235 1.7e-76 290.8 420 40.2
AagrBONN_evm.TU.Sc2ySwM_228.2269 Anthoceros agrestis HOM05D003438 ORTHO05D004235 1.1e-73 281.6 401 42.4
Mapoly0195s0004 Marchantia polymorpha HOM05D003438 ORTHO05D004235 1.4e-73 281.2 491 36.9
Solyc04g005200.4 Solanum lycopersicum HOM05D003438 ORTHO05D004235 2.6e-72 276.9 246 57.7
Pp3c9_10620 Physcomitrium patens HOM05D003438 ORTHO05D004235 1.1e-67 261.5 511 33.5
SEGI_27375 Sequoiadendron giganteum HOM05D003438 ORTHO05D004235 1.7e-63 247.7 346 39.6
Actinidia30182 Actinidia chinensis HOM05D003438 ORTHO05D004235 1.6e-61 241.1 152 79.6
Psat7g028040 Pisum sativum HOM05D003438 ORTHO05D004235 9.0e-57 225.3 242 51.7
Gohir.A13G089245 Gossypium hirsutum HOM05D003438 ORTHO05D004235 3.4e-56 223.4 180 58.9
Solyc04g005190.2 Solanum lycopersicum HOM05D003438 ORTHO05D004235 1.0e-44 185.3 163 53.4
Peaxi162Scf00396g01321 Petunia axillaris HOM05D003438 ORTHO05D004235 1.3e-42 178.3 168 51.8
Psat2g052840 Pisum sativum HOM05D003438 ORTHO05D004235 7.9e-37 159.1 151 55.0
MCO05G676 Micromonas commoda HOM05D003438 ORTHO05D004235 1.3e-31 141.7 549 25.9
PRCOL_00004179 Prasinoderma coloniale HOM05D003438 ORTHO05D004235 3.8e-31 140.2 458 28.2
CBR_g48056 Chara braunii HOM05D000019 ORTHO05D000048 5.0e-31 139.8 524 25.0
Cre16.g659050 Chlamydomonas reinhardtii HOM05D003438 ORTHO05D004235 1.2e-29 135.2 556 24.3
HPP92_019403 Vanilla planifolia HOM05D003438 ORTHO05D004235 2.7e-29 134.0 149 45.0
Nitab4.5_0002491g0050 Nicotiana tabacum HOM05D003438 ORTHO05D004235 1.8e-28 131.3 120 60.0
Psat2g033000 Pisum sativum HOM05D003438 ORTHO05D004235 9.1e-25 119.0 99 58.6
Cfa008818 Carpinus fangiana HOM05D003438 ORTHO05D004235 1.9e-22 111.3 107 50.5
Lalb_Chr16g0392011 Lupinus albus HOM05D003438 ORTHO05D004235 7.7e-16 89.4 79 53.2
Psat4g082840 Pisum sativum HOM05D003438 ORTHO05D004235 4.2e-14 83.6 52 78.8
Psat0s5438g0040 Pisum sativum HOM05D003438 ORTHO05D014892 5.7e-11 73.2 112 39.3
Nitab4.5_0002491g0040 Nicotiana tabacum HOM05D016139 ORTHO05D014242 1.3e-10 72.0 70 47.1
Psat1g136480 Pisum sativum HOM05D002598 ORTHO05D014892 2.2e-10 71.2 53 69.8
Psat1g137120 Pisum sativum HOM05D003438 ORTHO05D014892 2.2e-10 71.2 53 69.8
MD13G1054300 Malus domestica HOM05D003438 ORTHO05D004235 4.8e-10 70.1 42 81.0
Psat6g122800 Pisum sativum HOM05D002960 ORTHO05D014892 8.3e-10 69.3 53 69.8
Psat7g103520 Pisum sativum HOM05D003438 ORTHO05D014892 1.1e-09 68.9 53 67.9
Psat0s4200g0080 Pisum sativum HOM05D002807 ORTHO05D004235 1.8e-09 68.2 53 67.9


User provided reference genes

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