Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014219 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 1.4e-178 630.2 506 100.0
Actinidia18277 Actinidia chinensis HOM05D007034 ORTHO05D008665 6.4e-99 365.5 517 44.7
Rhsim08G0200400 Rhododendron simsii HOM05D007034 ORTHO05D008665 9.0e-85 318.5 507 41.6
Dinv13693 Davidia involucrata HOM05D007034 ORTHO05D008665 7.2e-66 255.8 529 34.2
Lj5C84G9 Lonicera japonica HOM05D007034 ORTHO05D008665 7.7e-60 235.7 528 33.3
Potri.012G111800 Populus trichocarpa HOM05D007034 ORTHO05D008665 2.4e-45 187.6 557 29.3
Sabra12G0081400 Salix brachista HOM05D007034 ORTHO05D008665 1.2e-44 185.3 561 28.9
vmacro19093 Vaccinium macrocarpon HOM05D007034 ORTHO05D008665 2.0e-44 184.5 116 75.0
Thecc.03G143600 Theobroma cacao HOM05D007034 ORTHO05D008665 4.2e-42 176.8 549 29.1
Lsat_1_v5_gn_5_9280 Lactuca sativa HOM05D007034 ORTHO05D008665 1.6e-41 174.9 521 28.2
GSVIVG01014061001 Vitis vinifera HOM05D007034 ORTHO05D008665 1.8e-40 171.4 116 64.7
QL10p035731 Quercus lobata HOM05D007034 ORTHO05D008665 8.8e-40 169.1 105 72.4
Cc04_g05570 Coffea canephora HOM05D007034 ORTHO05D008665 1.5e-39 168.3 523 28.1
Gohir.A07G045600 Gossypium hirsutum HOM05D007034 ORTHO05D008665 1.5e-39 168.3 551 28.1
TAR374G0491 Trochodendron aralioides HOM05D007034 ORTHO05D008665 1.5e-39 168.3 572 28.1
Gohir.D07G050000 Gossypium hirsutum HOM05D007034 ORTHO05D008665 7.5e-39 166.0 549 27.7
Prupe.5G138100 Prunus persica HOM05D007034 ORTHO05D008665 7.5e-39 166.0 103 69.9
RcHm_v2.0_Chr7g0188231 Rosa chinensis HOM05D007034 ORTHO05D008665 6.3e-38 162.9 526 27.8
HanXRQChr05g0154511 Helianthus annuus HOM05D007034 ORTHO05D008665 1.1e-37 162.2 537 27.4
CAN.G1008.36 Capsicum annuum HOM05D007034 ORTHO05D008665 1.4e-37 161.8 525 27.4
Actinidia25500 Actinidia chinensis HOM05D007034 ORTHO05D008665 3.1e-37 160.6 200 53.0
Gorai.001G053100 Gossypium raimondii HOM05D007034 ORTHO05D008665 4.1e-37 160.2 549 27.5
Nitab4.5_0009037g0010 Nicotiana tabacum HOM05D007034 ORTHO05D008665 4.1e-37 160.2 105 70.5
Ciclev10030559m.g Citrus clementina HOM05D007034 ORTHO05D008665 9.1e-37 159.1 112 67.0
PGSC0003DMG400014226 Solanum tuberosum HOM05D007034 ORTHO05D008665 9.1e-37 159.1 523 27.0
Nitab4.5_0000976g0250 Nicotiana tabacum HOM05D007034 ORTHO05D008665 1.2e-36 158.7 105 69.5
Duzib205G0091 Durio zibethinus HOM05D007034 ORTHO05D008665 1.6e-36 158.3 550 28.0
Nn3g16191 Nelumbo nucifera HOM05D007034 ORTHO05D008665 2.7e-36 157.5 94 75.5
FAN08G2641 Fragaria x ananassa HOM05D007034 ORTHO05D008665 5.9e-36 156.4 528 27.3
SalBow7G3686 Salvia bowleyana HOM05D007034 ORTHO05D008665 1.7e-35 154.8 116 62.1
Migut.I00651 Erythranthe guttata HOM05D007034 ORTHO05D008665 2.9e-35 154.1 105 66.7
Glyma.08G005800 Glycine max HOM05D007034 ORTHO05D008665 8.5e-35 152.5 97 68.0
Oeu012864.4 Olea europaea HOM05D007034 ORTHO05D008665 8.5e-35 152.5 98 69.4
Lj4g0024388 Lotus japonicus HOM05D007034 ORTHO05D008665 1.1e-34 152.1 98 69.4
SGA_v2.0_scaffold37G14662 Striga asiatica HOM05D007034 ORTHO05D008665 1.1e-34 152.1 518 27.8
Sopen03g036860 Solanum pennellii HOM05D007034 ORTHO05D008665 1.9e-34 151.4 106 65.1
Phvul.002G279600 Phaseolus vulgaris HOM05D007034 ORTHO05D008665 2.5e-34 151.0 121 57.0
Eucgr.G00023 Eucalyptus grandis HOM05D007034 ORTHO05D008665 3.2e-34 150.6 116 59.5
Atru.BG.50.p Acer truncatum HOM05D007034 ORTHO05D008665 4.2e-34 150.2 93 72.0
VMungo0251G1097 Vigna mungo HOM05D007034 ORTHO05D008665 7.2e-34 149.4 97 67.0
arahy.Tifrunner.gnm1.ann1.XWK03B Arachis hypogaea HOM05D007034 ORTHO05D008665 9.4e-34 149.1 97 66.0
MD06G1128300 Malus domestica HOM05D007034 ORTHO05D008665 9.4e-34 149.1 530 26.8
ECA246G4515 Erigeron canadensis HOM05D007034 ORTHO05D008665 1.2e-33 148.7 99 66.7
BcaB05g21618 Brassica carinata HOM05D007034 ORTHO05D008665 2.1e-33 147.9 116 57.8
arahy.Tifrunner.gnm1.ann1.FYEN8G Arachis hypogaea HOM05D007034 ORTHO05D008665 4.7e-33 146.7 97 66.0
Cpa.g.sc13.203 Carica papaya HOM05D007034 ORTHO05D008665 4.7e-33 146.7 107 63.6
FvH4_5g10030 Fragaria vesca HOM05D007034 ORTHO05D008665 4.7e-33 146.7 95 68.4
Ca_16833_v3 Cicer arietinum L. HOM05D007034 ORTHO05D008665 6.1e-33 146.4 104 60.6
Sc10g0005150 Simmondsia chinensis HOM05D007034 ORTHO05D008665 6.1e-33 146.4 96 66.7
Aqoxy5G02954 Aquilegia oxysepala HOM05D007034 ORTHO05D008665 8.0e-33 146.0 96 67.7
TWI23G0512 Tripterygium wilfordii HOM05D007034 ORTHO05D008665 1.8e-32 144.8 554 26.4
Aa31LG3G18970 Aethionema arabicum HOM05D007034 ORTHO05D008665 3.0e-32 144.1 116 57.8
BcaC03g13189 Brassica carinata HOM05D007034 ORTHO05D008665 4.0e-32 143.7 99 63.6
BolC2t06271H Brassica oleracea HOM05D007034 ORTHO05D008665 4.0e-32 143.7 99 63.6
Psat7g040600 Pisum sativum HOM05D007034 ORTHO05D008665 4.0e-32 143.7 97 66.0
TPR.G12786 Trifolium pratense HOM05D007034 ORTHO05D008665 5.2e-32 143.3 104 61.5
BraA02t04915Z Brassica rapa HOM05D007034 ORTHO05D008665 8.8e-32 142.5 99 62.6
AT5G07400 Arabidopsis thaliana HOM05D007034 ORTHO05D008665 1.2e-31 142.1 115 56.5
C02p03100 Brassica napus HOM05D007034 ORTHO05D008665 1.2e-31 142.1 99 63.6
CANSAT56G2345 Cannabis sativa HOM05D007034 ORTHO05D008665 1.5e-31 141.7 96 69.8
Medtr8g095490 Medicago truncatula HOM05D007034 ORTHO05D008665 1.5e-31 141.7 104 62.5
Haze_19381 Corylus avellana HOM05D007034 ORTHO05D008665 2.6e-31 141.0 116 57.8
AUR62029782 Chenopodium quinoa HOM05D007034 ORTHO05D008665 7.5e-31 139.4 96 62.5
Carub.0006s0637 Capsella rubella HOM05D007034 ORTHO05D008665 9.8e-31 139.0 99 63.6
Thhalv10012509m.g Eutrema salsugineum HOM05D007034 ORTHO05D008665 9.8e-31 139.0 116 55.2
AL6G17700 Arabidopsis lyrata HOM05D007034 ORTHO05D008665 1.3e-30 138.7 119 54.6
Lalb_Chr07g0183941 Lupinus albus HOM05D007034 ORTHO05D008665 1.3e-30 138.7 97 61.9
THA.LOC104818293 Tarenaya hassleriana HOM05D007034 ORTHO05D008665 2.2e-30 137.9 105 61.0
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 2.8e-30 137.5 100 59.0
PSO017G4759 Papaver somniferum HOM05D007034 ORTHO05D008665 2.8e-30 137.5 95 61.1
PSO017G2510 Papaver somniferum HOM05D007034 ORTHO05D008665 3.7e-30 137.1 95 61.1
MBI11_g13136_MAGBIO Magnolia biondii HOM05D007034 ORTHO05D008665 1.4e-29 135.2 94 57.4
MBI11_g45190_MAGBIO Magnolia biondii HOM05D007034 ORTHO05D008665 1.4e-29 135.2 94 57.4
Ah.15g089920 Amaranthus hybridus HOM05D007034 ORTHO05D008665 4.1e-29 133.7 110 54.5
BcaB05g21619 Brassica carinata HOM05D007034 ORTHO05D008665 7.0e-29 132.9 89 66.3
EL10Ac7g17117 Beta vulgaris HOM05D007034 ORTHO05D008665 1.6e-28 131.7 105 57.1
HanXRQChr10g0301151 Helianthus annuus HOM05D007034 ORTHO05D008665 3.5e-28 130.6 73 76.7
PGR042G1727 Punica granatum HOM05D007034 ORTHO05D008665 3.5e-28 130.6 97 60.8
DCAR_025620 Daucus carota HOM05D007034 ORTHO05D008665 1.7e-27 128.3 551 25.0
HPP92_006434 Vanilla planifolia HOM05D007034 ORTHO05D008665 4.2e-26 123.6 91 60.4
Os04g0403400 Oryza sativa ssp. japonica HOM05D007034 ORTHO05D008665 2.1e-25 121.3 117 48.7
Zm00001eb084530 Zea mays HOM05D007034 ORTHO05D008665 1.2e-23 115.5 95 53.7
ATR0582G190 Amborella trichopoda HOM05D007034 ORTHO05D008665 2.0e-23 114.8 94 53.2
Sp6g35470 Schrenkiella parvula HOM05D007034 ORTHO05D008665 1.3e-22 112.1 68 67.6
FAN04G0206 Fragaria x ananassa HOM05D007034 ORTHO05D008665 2.4e-21 107.8 495 25.3
COL.COLO4_37288 Corchorus olitorius HOM05D007034 ORTHO05D008665 1.3e-19 102.1 270 33.7
Solyc03g117960.4 Solanum lycopersicum HOM05D007034 ORTHO05D008665 1.0e-16 92.4 107 42.1
Manes.06G128800 Manihot esculenta HOM05D007034 ORTHO05D008665 4.4e-15 87.0 265 28.3
Peaxi162Scf00314g00824 Petunia axillaris HOM05D007034 ORTHO05D008665 5.7e-15 86.7 45 82.2
AagrBONN_evm.TU.Sc2ySwM_340.151 Anthoceros agrestis HOM05D007034 ORTHO05D008665 1.7e-14 85.1 72 54.2
SMO139G0138 Selaginella moellendorffii HOM05D007034 ORTHO05D008665 3.7e-14 84.0 96 39.6
TAR622G0913 Trochodendron aralioides HOM05D007034 ORTHO05D008665 7.0e-13 79.7 259 30.1
CBR_g36305 Chara braunii HOM05D007034 ORTHO05D008665 2.0e-12 78.2 90 47.8
FAN18G0345 Fragaria x ananassa HOM05D007034 ORTHO05D008665 1.7e-11 75.1 45 64.4


User provided reference genes

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