Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 5.9e-85 318.2 254 100.0
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 2.6e-32 143.3 128 100.0
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 4.9e-31 139.0 210 73.8
Actinidia20590 Actinidia chinensis HOM05D006835 ORTHO05D008587 4.7e-26 122.5 210 77.1
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 3.1e-25 119.8 65 86.2
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 5.2e-25 119.0 127 57.5
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 2.6e-24 116.7 65 83.1
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 2.6e-24 116.7 127 84.3
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 7.6e-24 115.2 65 81.5
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 3.8e-23 112.8 231 46.8
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 3.2e-22 109.8 65 75.4
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 3.2e-22 109.8 65 76.9
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 5.4e-22 109.0 60 81.7
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 5.4e-22 109.0 65 75.4
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 5.4e-22 109.0 65 75.4
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 7.1e-22 108.6 64 76.6
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 9.3e-22 108.2 63 77.8
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 1.2e-21 107.8 65 73.8
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 1.2e-21 107.8 62 80.6
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 2.1e-21 107.1 64 76.6
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 2.1e-21 107.1 64 76.6
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 2.1e-21 107.1 64 76.6
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 3.5e-21 106.3 125 80.0
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 3.5e-21 106.3 64 75.0
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 3.5e-21 106.3 63 74.6
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 3.5e-21 106.3 64 75.0
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 6.0e-21 105.5 65 72.3
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 6.0e-21 105.5 64 75.0
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 1.0e-20 104.8 65 72.3
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 1.3e-20 104.4 64 75.0
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 1.7e-20 104.0 62 77.4
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 2.3e-20 103.6 170 84.1
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 3.0e-20 103.2 64 71.9
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 3.9e-20 102.8 65 72.3
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 3.9e-20 102.8 65 72.3
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 3.9e-20 102.8 60 80.0
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 5.1e-20 102.4 63 73.0
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 5.1e-20 102.4 65 70.8
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 6.6e-20 102.1 65 70.8
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 6.6e-20 102.1 65 70.8
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 6.6e-20 102.1 65 72.3
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 1.5e-19 100.9 61 80.3
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 1.5e-19 100.9 65 69.2
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 1.9e-19 100.5 62 74.2
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 2.5e-19 100.1 64 67.2
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 2.5e-19 100.1 64 71.9
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 2.5e-19 100.1 64 71.9
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 3.3e-19 99.8 66 69.7
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 3.3e-19 99.8 65 69.2
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 3.3e-19 99.8 64 76.6
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 5.6e-19 99.0 185 51.9
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 5.6e-19 99.0 64 65.6
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 5.6e-19 99.0 65 66.2
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 7.3e-19 98.6 61 78.7
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 7.3e-19 98.6 61 78.7
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 1.3e-18 97.8 64 67.2
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 1.3e-18 97.8 64 65.6
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 1.6e-18 97.4 65 70.8
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 1.6e-18 97.4 65 67.7
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 2.1e-18 97.1 64 65.6
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 2.1e-18 97.1 64 67.2
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 2.1e-18 97.1 65 66.2
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 2.1e-18 97.1 62 72.6
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 2.8e-18 96.7 60 75.0
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 2.8e-18 96.7 60 75.0
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 2.8e-18 96.7 64 65.6
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 2.8e-18 96.7 64 65.6
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 4.8e-18 95.9 65 69.2
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 4.8e-18 95.9 65 64.6
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 6.2e-18 95.5 65 63.1
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 6.2e-18 95.5 61 72.1
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 6.2e-18 95.5 65 64.6
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 8.1e-18 95.1 61 70.5
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 8.1e-18 95.1 57 75.4
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 1.4e-17 94.4 61 75.4
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 1.4e-17 94.4 61 70.5
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 2.4e-17 93.6 64 67.2
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 3.1e-17 93.2 173 72.3
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 4.0e-17 92.8 60 70.0
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 5.3e-17 92.4 62 67.7
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 6.9e-17 92.0 58 70.7
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 9.0e-17 91.7 58 74.1
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 1.5e-16 90.9 63 66.7
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 1.5e-16 90.9 65 64.6
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 1.5e-16 90.9 63 65.1
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 2.0e-16 90.5 58 70.7
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 2.6e-16 90.1 62 64.5
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 4.5e-16 89.4 62 64.5
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 4.5e-16 89.4 62 64.5
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 4.5e-16 89.4 62 62.9
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 5.8e-16 89.0 58 65.5
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 5.8e-16 89.0 58 65.5
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 7.6e-16 88.6 65 63.1
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 1.3e-15 87.8 65 63.1
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.3e-15 87.8 58 65.5
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 1.3e-15 87.8 62 66.1
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 2.2e-15 87.0 62 64.5
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 2.9e-15 86.7 62 64.5
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 2.9e-15 86.7 64 57.8
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 1.4e-14 84.3 62 61.3
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 4.2e-14 82.8 63 57.1
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 4.2e-14 82.8 63 57.1
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 5.4e-14 82.4 63 57.1
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 5.4e-14 82.4 63 57.1
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 3.5e-13 79.7 65 53.8
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 1.0e-12 78.2 106 41.5
vmacro17159 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 1.3e-10 71.2 44 75.0
CsaV3_6G009960 Cucumis sativus L. HOM05D064228 ORTHO05D045021 1.1e-09 68.2 50 64.0
SEGI_18890 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 3.4e-08 63.2 42 64.3
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 6.4e-07 58.9 64 45.3
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 8.4e-07 58.5 65 41.5
FAN09G1770 Fragaria x ananassa HOM05D005956 ORTHO05D007197 5.5e-06 55.8 62 43.5


User provided reference genes

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