Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 5.5e-262 907.1 472 100.0
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 8.4e-178 627.5 476 70.2
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 6.1e-168 594.7 475 66.3
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 6.9e-156 554.7 470 64.7
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 1.4e-151 540.4 476 63.4
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 2.8e-141 506.1 468 59.2
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 1.8e-140 503.4 477 59.7
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 1.9e-137 493.4 466 59.0
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 8.8e-135 484.6 475 56.8
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 1.2e-134 484.2 471 56.5
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 4.4e-134 482.3 469 56.7
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 4.4e-134 482.3 478 54.8
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 4.4e-134 482.3 466 57.3
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 1.3e-133 480.7 492 55.7
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 1.3e-133 480.7 468 59.0
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 7.0e-132 474.9 472 56.4
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 1.2e-131 474.2 487 55.4
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 1.6e-131 473.8 470 55.5
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 7.7e-131 471.5 484 56.0
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 2.3e-130 469.9 461 55.1
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 3.8e-130 469.2 470 54.7
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 6.6e-130 468.4 465 55.3
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 3.3e-129 466.1 474 53.8
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 2.8e-128 463.0 467 57.2
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 8.0e-128 461.5 473 55.4
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 4.0e-127 459.1 472 55.7
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 2.2e-125 453.4 477 52.8
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 3.7e-125 452.6 472 52.5
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 1.1e-124 451.1 461 56.8
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 1.8e-124 450.3 414 57.7
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 2.3e-122 443.4 474 51.7
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 1.9e-121 440.3 463 51.6
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 4.3e-121 439.1 451 52.1
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 5.6e-121 438.7 475 52.8
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 5.6e-121 438.7 474 52.7
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 2.1e-120 436.8 463 51.4
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.6e-120 436.0 482 52.5
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.4e-119 434.1 475 52.6
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 1.8e-119 433.7 458 53.7
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 1.8e-119 433.7 472 51.3
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 4.4e-118 429.1 484 51.9
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 3.7e-117 426.0 460 55.2
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 2.4e-116 423.3 470 51.7
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 1.6e-115 420.6 447 53.0
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.0e-115 420.2 475 52.4
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 7.8e-115 418.3 469 53.9
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 1.5e-113 414.1 470 51.5
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 1.9e-113 413.7 475 48.0
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 4.3e-113 412.5 445 51.2
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 2.8e-112 409.8 475 48.0
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 8.9e-111 404.8 471 48.8
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 7.5e-110 401.7 470 47.7
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 9.8e-110 401.4 466 46.8
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 1.3e-109 401.0 472 46.2
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 2.9e-109 399.8 467 49.9
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.1e-108 397.9 462 50.6
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.6e-107 394.0 443 52.1
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 3.9e-106 389.4 450 50.7
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 6.6e-106 388.7 480 46.0
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 8.6e-106 388.3 467 46.7
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 1.5e-105 387.5 463 47.1
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 1.9e-105 387.1 338 60.7
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 1.2e-104 384.4 465 48.2
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 3.6e-104 382.9 469 48.4
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 1.4e-103 380.9 465 46.9
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 1.8e-103 380.6 469 46.3
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 2.3e-103 380.2 438 48.6
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 8.9e-103 378.3 442 48.2
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 1.5e-102 377.5 467 45.2
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 1.3e-101 374.4 473 44.8
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 1.7e-101 374.0 468 47.0
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 8.3e-101 371.7 415 49.9
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 4.1e-100 369.4 468 46.8
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 7.1e-100 368.6 465 46.7
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 9.2e-100 368.2 465 47.5
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 1.6e-99 367.5 465 46.2
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 2.1e-99 367.1 464 46.1
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 6.0e-99 365.5 468 46.6
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 7.8e-99 365.2 468 46.4
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 1.7e-98 364.0 458 45.6
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 3.9e-98 362.8 468 46.2
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 6.6e-98 362.1 465 45.8
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 8.6e-98 361.7 461 45.8
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 1.5e-97 360.9 465 45.2
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 7.3e-97 358.6 471 44.2
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 8.9e-95 351.7 493 44.2
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 9.9e-94 348.2 470 45.7
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 6.4e-93 345.5 425 45.6
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 4.2e-92 342.8 459 43.4
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 4.6e-91 339.3 356 52.8
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 1.0e-90 338.2 460 42.8
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 2.0e-86 323.9 302 59.3
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 1.6e-83 314.3 302 55.0
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 2.1e-83 313.9 353 51.6
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 3.1e-79 300.1 472 41.3
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 4.5e-78 296.2 463 41.3
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 2.4e-76 290.4 329 47.1
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 1.1e-68 265.0 192 70.3
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.7e-61 241.1 325 42.8
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 2.1e-43 181.0 369 35.8
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 1.1e-33 148.7 226 42.9
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 5.0e-29 133.3 156 42.9
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 8.5e-29 132.5 313 31.3
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.7e-27 126.7 144 46.5
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 3.0e-26 124.0 254 33.5
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.0e-26 123.6 144 45.8
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.0e-26 123.6 144 45.8
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 3.5e-22 110.5 497 25.6
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 1.3e-21 108.6 89 65.2
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 6.5e-21 106.3 166 34.3
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 6.5e-21 106.3 166 34.3
CSS0047646 Camellia sinensis var. sinensis HOM05D000493 ORTHO05D001638 3.2e-20 104.0 62 90.3
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.2e-20 103.6 128 46.1
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 9.4e-20 102.4 118 45.8
Actinidia07619 Actinidia chinensis HOM05D006143 ORTHO05D007587 6.1e-19 99.8 177 39.0
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 6.1e-19 99.8 134 44.8
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 4.4e-17 93.6 429 25.9
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 4.8e-16 90.1 78 57.7
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 1.1e-15 89.0 424 23.8
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 9.1e-15 85.9 123 39.8
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 1.5e-09 68.6 468 23.1
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 2.2e-08 64.7 55 56.4
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 4.9e-08 63.5 434 23.0
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.2e-06 58.9 114 31.6


User provided reference genes

Program Settings