Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011943 Camellia sinensis var. sinensis HOM05D004154 ORTHO05D004988 9.2e-114 413.7 227 100.0
CSS0017125 Camellia sinensis var. sinensis HOM05D004154 ORTHO05D004988 1.2e-110 403.3 228 97.8
Potri.001G093700 Populus trichocarpa HOM05D004154 ORTHO05D004988 8.3e-30 134.8 153 55.6
Sabra01G0069600 Salix brachista HOM05D004154 ORTHO05D004988 4.1e-29 132.5 153 60.1
Rhsim07G0083500 Rhododendron simsii HOM05D004154 ORTHO05D004988 7.0e-29 131.7 151 62.3
SalBow1G2286 Salvia bowleyana HOM05D004154 ORTHO05D004988 1.0e-27 127.9 183 54.6
SalBow1G6205 Salvia bowleyana HOM05D004154 ORTHO05D004988 1.0e-27 127.9 183 54.6
CSS0019694 Camellia sinensis var. sinensis HOM05D004154 ORTHO05D004988 1.3e-27 127.5 193 49.2
Glyma.05G215500 Glycine max HOM05D004154 ORTHO05D004988 5.0e-27 125.6 182 51.1
AUR62019814 Chenopodium quinoa HOM05D004154 ORTHO05D004988 1.5e-26 124.0 198 46.0
CSS0031879 Camellia sinensis var. sinensis HOM05D004154 ORTHO05D004988 8.0e-25 118.2 89 76.4
Cfa012835 Carpinus fangiana HOM05D004154 ORTHO05D004988 5.2e-24 115.5 169 46.2
PSO135G0371 Papaver somniferum HOM05D004154 ORTHO05D004988 2.6e-23 113.2 187 46.5
Gohir.A11G024000 Gossypium hirsutum HOM05D004154 ORTHO05D004988 3.4e-23 112.8 184 47.8
Dinv38854 Davidia involucrata HOM05D000337 ORTHO05D000297 5.7e-23 112.1 140 52.1
CDE03G0409 Ceratophyllum demersum HOM05D004154 ORTHO05D004988 7.5e-23 111.7 156 52.6
Ca_17492_v3 Cicer arietinum L. HOM05D004154 ORTHO05D004988 9.8e-23 111.3 185 47.6
Potri.003G138000 Populus trichocarpa HOM05D004154 ORTHO05D004988 1.3e-22 110.9 153 49.7
Prupe.5G115800 Prunus persica HOM05D004154 ORTHO05D004988 8.3e-22 108.2 184 46.2
vmacro13908 Vaccinium macrocarpon HOM05D004154 ORTHO05D004988 1.8e-21 107.1 181 47.0
Duzib068G1416 Durio zibethinus HOM05D004154 ORTHO05D004988 2.4e-21 106.7 167 50.3
HanXRQChr17g0535161 Helianthus annuus HOM05D004154 ORTHO05D004988 2.4e-21 106.7 166 50.6
Gohir.D11G023700 Gossypium hirsutum HOM05D004154 ORTHO05D004988 5.4e-21 105.5 197 41.6
AUR62010814 Chenopodium quinoa HOM05D004154 ORTHO05D004988 1.6e-20 104.0 198 39.4
Gorai.007G025500 Gossypium raimondii HOM05D004154 ORTHO05D004988 2.0e-20 103.6 197 41.1
arahy.Tifrunner.gnm1.ann1.1D56YB Arachis hypogaea HOM05D004154 ORTHO05D004988 2.7e-20 103.2 183 43.2
arahy.Tifrunner.gnm1.ann1.Y783I6 Arachis hypogaea HOM05D004154 ORTHO05D004988 2.7e-20 103.2 183 43.2
Lalb_Chr05g0224221 Lupinus albus HOM05D004154 ORTHO05D004988 3.5e-20 102.8 168 46.4
FAN04G1279 Fragaria x ananassa HOM05D004154 ORTHO05D004988 4.5e-20 102.4 170 48.8
FAN04G2754 Fragaria x ananassa HOM05D004154 ORTHO05D004988 4.5e-20 102.4 170 48.8
VMungo0251G3674 Vigna mungo HOM05D004154 ORTHO05D004988 7.7e-20 101.7 179 46.4
Cc08_g15820 Coffea canephora HOM05D004154 ORTHO05D004988 1.3e-19 100.9 145 56.6
FvH4_5g04120 Fragaria vesca HOM05D004154 ORTHO05D004988 1.3e-19 100.9 169 49.7
FAN18G0035 Fragaria x ananassa HOM05D004154 ORTHO05D004988 1.3e-19 100.9 169 49.7
Oeu061093.1 Olea europaea HOM05D004154 ORTHO05D004988 1.3e-19 100.9 183 45.9
QL02p031322 Quercus lobata HOM05D004154 ORTHO05D004988 1.7e-19 100.5 197 42.1
Aqoxy7G00145 Aquilegia oxysepala HOM05D004154 ORTHO05D004988 2.3e-19 100.1 190 46.3
COL.COLO4_21713 Corchorus olitorius HOM05D004154 ORTHO05D004988 2.3e-19 100.1 182 47.8
Lj4g0021447 Lotus japonicus HOM05D004154 ORTHO05D004988 2.3e-19 100.1 183 39.9
Medtr8g099305 Medicago truncatula HOM05D004154 ORTHO05D004988 2.3e-19 100.1 184 42.9
Nn3g19070 Nelumbo nucifera HOM05D004154 ORTHO05D004988 2.3e-19 100.1 184 42.9
FAN18G2617 Fragaria x ananassa HOM05D004154 ORTHO05D004988 2.9e-19 99.8 170 52.4
PSO384G3063 Papaver somniferum HOM05D004154 ORTHO05D004988 3.8e-19 99.4 187 46.0
Phvul.002G296700 Phaseolus vulgaris HOM05D004154 ORTHO05D004988 3.8e-19 99.4 185 43.2
Glyma.08G021700 Glycine max HOM05D004154 ORTHO05D004988 5.0e-19 99.0 185 45.4
MBI07_g24338_MAGBIO Magnolia biondii HOM05D004154 ORTHO05D004988 5.0e-19 99.0 145 47.6
Manes.02G012100 Manihot esculenta HOM05D004154 ORTHO05D004988 8.6e-19 98.2 165 52.1
SGA_v2.0_scaffold173G39085 Striga asiatica HOM05D004154 ORTHO05D004988 8.6e-19 98.2 184 42.4
Zm00001eb238060 Zea mays HOM05D004154 ORTHO05D004988 1.9e-18 97.1 137 55.5
MSTRG.25659 Avicennia marina HOM05D004154 ORTHO05D004988 2.5e-18 96.7 148 51.4
Cpa.g.sc122.41 Carica papaya HOM05D004154 ORTHO05D004988 2.5e-18 96.7 184 48.4
Duzib205G2047 Durio zibethinus HOM05D004154 ORTHO05D004988 5.6e-18 95.5 168 52.4
Sed0017887 Sechium edule HOM05D004154 ORTHO05D004988 7.2e-18 95.1 192 47.4
TAR374G1070 Trochodendron aralioides HOM05D004154 ORTHO05D004988 9.5e-18 94.7 113 51.3
CANSAT21G2399 Cannabis sativa HOM05D004154 ORTHO05D004988 1.2e-17 94.4 137 56.2
Thecc.03G293700 Theobroma cacao HOM05D004154 ORTHO05D004988 1.6e-17 94.0 180 43.3
Atru.chr2.763 Acer truncatum HOM05D004154 ORTHO05D004988 2.8e-17 93.2 103 59.2
MD14G1121900 Malus domestica HOM05D004154 ORTHO05D004988 2.8e-17 93.2 110 50.0
CiPaw.11G123500 Carya illinoinensis HOM05D004154 ORTHO05D004988 4.7e-17 92.4 185 47.0
FAN08G1247 Fragaria x ananassa HOM05D004154 ORTHO05D004988 4.7e-17 92.4 169 46.7
unitig_32.g11609 Utricularia gibba HOM05D004154 ORTHO05D004988 8.0e-17 91.7 143 49.7
CSS0026293 Camellia sinensis var. sinensis HOM05D004154 ORTHO05D004988 2.3e-16 90.1 51 94.1
Carub.0007s1732 Capsella rubella HOM05D004154 ORTHO05D004988 3.0e-16 89.7 144 52.1
THA.LOC104806434 Tarenaya hassleriana HOM05D004154 ORTHO05D004988 4.0e-16 89.4 167 50.3
ECA234G2690 Erigeron canadensis HOM05D004154 ORTHO05D004988 5.2e-16 89.0 190 46.3
Nitab4.5_0000223g0250 Nicotiana tabacum HOM05D004154 ORTHO05D004988 5.2e-16 89.0 184 46.2
AT4G23800 Arabidopsis thaliana HOM05D004154 ORTHO05D004988 6.8e-16 88.6 151 50.3
FAN13G2696 Fragaria x ananassa HOM05D004154 ORTHO05D004988 6.8e-16 88.6 173 48.6
Lsat_1_v5_gn_3_10260 Lactuca sativa HOM05D004154 ORTHO05D004988 8.9e-16 88.2 168 47.0
Sopen08g030360 Solanum pennellii HOM05D004154 ORTHO05D004988 1.2e-15 87.8 170 48.8
A01p15110 Brassica napus HOM05D004154 ORTHO05D004988 3.4e-15 86.3 157 47.1
Atru.chr9.2030 Acer truncatum HOM05D004154 ORTHO05D004988 4.4e-15 85.9 167 45.5
AL7G29550 Arabidopsis lyrata HOM05D004154 ORTHO05D004988 4.4e-15 85.9 151 49.0
A09p28160 Brassica napus HOM05D004154 ORTHO05D004988 4.4e-15 85.9 154 50.0
C01p19010 Brassica napus HOM05D004154 ORTHO05D004988 4.4e-15 85.9 182 45.1
BolC1t01827H Brassica oleracea HOM05D004154 ORTHO05D004988 4.4e-15 85.9 182 45.1
PGSC0003DMG400012298 Solanum tuberosum HOM05D004154 ORTHO05D004988 4.4e-15 85.9 184 44.0
GSVIVG01019504001 Vitis vinifera HOM05D004154 ORTHO05D004988 4.4e-15 85.9 184 41.3
BraA01t01449Z Brassica rapa HOM05D004154 ORTHO05D004988 5.7e-15 85.5 151 48.3
BraA09t38379Z Brassica rapa HOM05D004154 ORTHO05D004988 5.7e-15 85.5 154 50.0
CARHR231190 Cardamine hirsuta HOM05D004154 ORTHO05D004988 5.7e-15 85.5 151 41.1
BcaC09g50947 Brassica carinata HOM05D004154 ORTHO05D004988 9.8e-15 84.7 151 48.3
Haze_08653 Corylus avellana HOM05D004154 ORTHO05D004988 9.8e-15 84.7 169 47.3
Sp6g06370 Schrenkiella parvula HOM05D004154 ORTHO05D004988 9.8e-15 84.7 145 51.7
BcaNung01086 Brassica carinata HOM05D004154 ORTHO05D004988 1.3e-14 84.3 151 48.3
Sc07g0009970 Simmondsia chinensis HOM05D004154 ORTHO05D004988 1.3e-14 84.3 102 55.9
MELO3C016306.2 Cucumis melo HOM05D004154 ORTHO05D004988 1.7e-14 84.0 192 44.3
Thhalv10028648m.g Eutrema salsugineum HOM05D004154 ORTHO05D004988 2.2e-14 83.6 182 46.7
Glyma.01G060600 Glycine max HOM05D004154 ORTHO05D004988 2.2e-14 83.6 141 43.3
PGSC0003DMG400012086 Solanum tuberosum HOM05D004154 ORTHO05D004988 2.2e-14 83.6 143 42.0
TWI60G1238 Tripterygium wilfordii HOM05D004154 ORTHO05D004988 2.9e-14 83.2 194 36.1
AT4G11080 Arabidopsis thaliana HOM05D004154 ORTHO05D004988 3.7e-14 82.8 145 50.3
RcHm_v2.0_Chr7g0195371 Rosa chinensis HOM05D004154 ORTHO05D004988 8.3e-14 81.6 136 50.7
Sp7g21760 Schrenkiella parvula HOM05D004154 ORTHO05D004988 8.3e-14 81.6 177 39.0
TPR.G3381 Trifolium pratense HOM05D004154 ORTHO05D004988 1.1e-13 81.3 185 44.9
AL6G45220 Arabidopsis lyrata HOM05D004154 ORTHO05D004988 1.4e-13 80.9 145 49.7
BcaC04g21100 Brassica carinata HOM05D004154 ORTHO05D004988 1.8e-13 80.5 154 48.7
C09p35690 Brassica napus HOM05D004154 ORTHO05D004988 1.8e-13 80.5 154 48.7
BolC9t56405H Brassica oleracea HOM05D004154 ORTHO05D004988 1.8e-13 80.5 154 48.7
CAN.G532.100 Capsicum annuum HOM05D004154 ORTHO05D004988 1.8e-13 80.5 106 51.9
CsaV3_4G006440 Cucumis sativus L. HOM05D004154 ORTHO05D004988 1.8e-13 80.5 192 43.2
Aa31LG6G7020 Aethionema arabicum HOM05D004154 ORTHO05D004988 2.4e-13 80.1 150 49.3
Migut.A00676 Erythranthe guttata HOM05D004154 ORTHO05D004988 2.4e-13 80.1 137 53.3
Solyc08g082070.3 Solanum lycopersicum HOM05D004154 ORTHO05D004988 2.4e-13 80.1 170 47.1
CARHR255520 Cardamine hirsuta HOM05D004154 ORTHO05D004988 3.2e-13 79.7 145 50.3
Carub.0006s2985 Capsella rubella HOM05D004154 ORTHO05D004988 5.4e-13 79.0 145 47.6
CSS0023347 Camellia sinensis var. sinensis HOM05D004154 ORTHO05D004988 7.0e-13 78.6 89 66.3
Thhalv10025168m.g Eutrema salsugineum HOM05D004154 ORTHO05D004988 7.0e-13 78.6 186 42.5
Eucgr.E00847 Eucalyptus grandis HOM05D004154 ORTHO05D004988 1.2e-12 77.8 179 41.3
DCAR_027717 Daucus carota HOM05D004154 ORTHO05D004988 1.6e-12 77.4 146 41.8
Aa31LG5G23780 Aethionema arabicum HOM05D004154 ORTHO05D004988 2.0e-12 77.0 152 48.7
PGR042G2687 Punica granatum HOM05D004154 ORTHO05D004988 5.9e-12 75.5 182 36.8
EL10Ac5g12892 Beta vulgaris HOM05D004154 ORTHO05D004988 7.8e-12 75.1 134 41.8
MD06G1103000 Malus domestica HOM05D004154 ORTHO05D004988 1.7e-11 73.9 183 44.3
Pp3c11_8530 Physcomitrium patens HOM05D004154 ORTHO05D004988 1.7e-11 73.9 169 41.4
CDE04G1588 Ceratophyllum demersum HOM05D004154 ORTHO05D004988 6.6e-11 72.0 98 40.8
CSS0027886 Camellia sinensis var. sinensis HOM05D004154 ORTHO05D004988 1.9e-10 70.5 113 46.9
Atru.chr9.2037 Acer truncatum HOM05D004154 ORTHO05D001448 7.3e-10 68.6 81 56.8
Nitab4.5_0010205g0030 Nicotiana tabacum HOM05D004154 ORTHO05D004988 7.3e-10 68.6 173 45.1
Lj8A210T88 Lonicera japonica HOM05D004154 ORTHO05D004988 4.7e-09 65.9 183 42.6
Pp3c7_20570 Physcomitrium patens HOM05D004154 ORTHO05D004988 6.2e-09 65.5 103 40.8
Ciclev10023918m.g Citrus clementina HOM05D004154 ORTHO05D004988 5.2e-08 62.4 173 42.8
Hund11402 Selenicereus undatus HOM05D004154 ORTHO05D004988 1.5e-07 60.8 171 43.3
AagrBONN_evm.TU.Sc2ySwM_117.3685 Anthoceros agrestis HOM05D004154 ORTHO05D004988 2.0e-07 60.5 146 37.0
SEGI_25080 Sequoiadendron giganteum HOM05D004154 ORTHO05D004988 2.2e-06 57.0 109 37.6
Actinidia12320 Actinidia chinensis HOM05D004154 ORTHO05D004988 4.9e-06 55.8 57 54.4


User provided reference genes

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