Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011286 Camellia sinensis var. sinensis HOM05D002168 ORTHO05D002277 1.6e-77 292.7 149 100.0
Haze_20409 Corylus avellana HOM05D002168 ORTHO05D002277 7.3e-51 204.1 113 88.5
CAN.G9.1 Capsicum annuum HOM05D002168 ORTHO05D002277 2.8e-50 202.2 113 87.6
PGSC0003DMG401007628 Solanum tuberosum HOM05D002168 ORTHO05D002277 4.7e-50 201.4 113 86.7
Gohir.A11G229100 Gossypium hirsutum HOM05D002168 ORTHO05D002277 6.2e-50 201.1 113 87.6
Gorai.007G255300 Gossypium raimondii HOM05D002168 ORTHO05D002277 6.2e-50 201.1 113 87.6
Thecc.05G242400 Theobroma cacao HOM05D002168 ORTHO05D002277 6.2e-50 201.1 113 87.6
GSVIVG01029958001 Vitis vinifera HOM05D002168 ORTHO05D002277 1.1e-49 200.3 117 85.5
Dinv13788 Davidia involucrata HOM05D002168 ORTHO05D002277 1.4e-49 199.9 113 89.4
CiPaw.09G166700 Carya illinoinensis HOM05D002168 ORTHO05D002277 1.8e-49 199.5 113 86.7
Gohir.D11G241200 Gossypium hirsutum HOM05D002168 ORTHO05D002277 1.8e-49 199.5 113 86.7
Nitab4.5_0000098g0270 Nicotiana tabacum HOM05D002168 ORTHO05D002277 1.8e-49 199.5 112 88.4
Prupe.7G014600 Prunus persica HOM05D002168 ORTHO05D002277 1.8e-49 199.5 113 85.0
Solyc08g066140.3 Solanum lycopersicum HOM05D002168 ORTHO05D002277 1.8e-49 199.5 113 86.7
Sopen08g019820 Solanum pennellii HOM05D002168 ORTHO05D002277 1.8e-49 199.5 113 86.7
Nn2g14555 Nelumbo nucifera HOM05D002168 ORTHO05D002277 2.3e-49 199.1 113 85.8
QL07p017571 Quercus lobata HOM05D002168 ORTHO05D002277 2.3e-49 199.1 113 87.6
Ciclev10019242m.g Citrus clementina HOM05D002168 ORTHO05D002277 3.1e-49 198.7 113 87.6
MBI11_g10545_MAGBIO Magnolia biondii HOM05D002168 ORTHO05D002277 3.1e-49 198.7 117 84.6
FAN19G2763 Fragaria x ananassa HOM05D002168 ORTHO05D002277 4.0e-49 198.4 113 86.7
Cfa017714 Carpinus fangiana HOM05D002168 ORTHO05D002277 5.2e-49 198.0 113 85.0
Manes.08G153100 Manihot esculenta HOM05D002168 ORTHO05D002277 5.2e-49 198.0 113 86.7
Nitab4.5_0005671g0040 Nicotiana tabacum HOM05D002168 ORTHO05D002277 6.8e-49 197.6 113 86.7
FvH4_1g28580 Fragaria vesca HOM05D002168 ORTHO05D002277 8.9e-49 197.2 113 85.8
ATR0697G078 Amborella trichopoda HOM05D002168 ORTHO05D002277 1.2e-48 196.8 113 84.1
Dinv25043 Davidia involucrata HOM05D002168 ORTHO05D002277 1.2e-48 196.8 113 86.7
FAN28G1730 Fragaria x ananassa HOM05D002168 ORTHO05D002277 1.2e-48 196.8 113 85.8
Oeu044206.2 Olea europaea HOM05D002168 ORTHO05D002277 1.5e-48 196.4 113 85.8
Actinidia03921 Actinidia chinensis HOM05D002168 ORTHO05D002277 2.0e-48 196.1 113 87.6
CDE07G0416 Ceratophyllum demersum HOM05D002168 ORTHO05D002277 2.6e-48 195.7 113 84.1
RcHm_v2.0_Chr3g0496111 Rosa chinensis HOM05D002168 ORTHO05D002277 2.6e-48 195.7 113 85.0
Cc06_g21470 Coffea canephora HOM05D002168 ORTHO05D002277 3.4e-48 195.3 113 86.7
Eucgr.A02140 Eucalyptus grandis HOM05D002168 ORTHO05D002277 5.8e-48 194.5 113 82.3
TAR633G2049 Trochodendron aralioides HOM05D002168 ORTHO05D002277 9.8e-48 193.7 113 85.0
Potri.013G065700 Populus trichocarpa HOM05D002168 ORTHO05D002277 2.2e-47 192.6 113 84.1
PGR042G1483 Punica granatum HOM05D002168 ORTHO05D002277 2.2e-47 192.6 113 85.0
Sabra13G0057400 Salix brachista HOM05D002168 ORTHO05D002277 2.2e-47 192.6 113 84.1
Duzib177G0738 Durio zibethinus HOM05D002168 ORTHO05D002277 3.7e-47 191.8 113 84.1
Rhsim03G0049500 Rhododendron simsii HOM05D002168 ORTHO05D002277 4.9e-47 191.4 113 83.2
TWI32G0897 Tripterygium wilfordii HOM05D002168 ORTHO05D002277 4.9e-47 191.4 113 83.2
MD12G1011400 Malus domestica HOM05D002168 ORTHO05D002277 1.1e-46 190.3 113 81.4
Potri.019G040100 Populus trichocarpa HOM05D002168 ORTHO05D002277 1.1e-46 190.3 113 82.3
Ca_08312_v3 Cicer arietinum L. HOM05D002168 ORTHO05D002277 1.4e-46 189.9 113 82.3
COL.COLO4_28638 Corchorus olitorius HOM05D002168 ORTHO05D002277 1.4e-46 189.9 113 81.4
Ah.04g153620 Amaranthus hybridus HOM05D002168 ORTHO05D002277 2.4e-46 189.1 114 80.7
Migut.J01542 Erythranthe guttata HOM05D002168 ORTHO05D002277 2.4e-46 189.1 117 79.5
Sed0008218 Sechium edule HOM05D002168 ORTHO05D002277 3.2e-46 188.7 113 83.2
MELO3C009794.2 Cucumis melo HOM05D002168 ORTHO05D002277 4.1e-46 188.3 113 83.2
Lj1g0016812 Lotus japonicus HOM05D002168 ORTHO05D002277 4.1e-46 188.3 113 79.6
vmacro07652 Vaccinium macrocarpon HOM05D002168 ORTHO05D002277 4.1e-46 188.3 113 79.6
EL10Ac3g06617 Beta vulgaris HOM05D002168 ORTHO05D002277 5.4e-46 188.0 113 82.3
CsaV3_3G040620 Cucumis sativus L. HOM05D002168 ORTHO05D002277 5.4e-46 188.0 113 83.2
THA.LOC104802884 Tarenaya hassleriana HOM05D002168 ORTHO05D002277 7.0e-46 187.6 113 81.4
arahy.Tifrunner.gnm1.ann1.B3FMDE Arachis hypogaea HOM05D002168 ORTHO05D002277 1.2e-45 186.8 113 78.8
SGA_v2.0_scaffold69G23217 Striga asiatica HOM05D002168 ORTHO05D002277 1.6e-45 186.4 113 81.4
DCAR_016962 Daucus carota HOM05D002168 ORTHO05D002277 2.0e-45 186.0 113 82.3
arahy.Tifrunner.gnm1.ann1.V0KP8I Arachis hypogaea HOM05D002168 ORTHO05D002277 2.7e-45 185.7 113 77.9
FAN26G0197 Fragaria x ananassa HOM05D002168 ORTHO05D002277 2.7e-45 185.7 113 83.2
HanXRQChr07g0196271 Helianthus annuus HOM05D002168 ORTHO05D002277 3.5e-45 185.3 113 82.3
Os07g0168000 Oryza sativa ssp. japonica HOM05D002168 ORTHO05D002277 3.5e-45 185.3 113 80.5
AUR62018085 Chenopodium quinoa HOM05D002168 ORTHO05D002277 6.0e-45 184.5 113 80.5
Lsat_1_v5_gn_2_103701 Lactuca sativa HOM05D002168 ORTHO05D002277 7.8e-45 184.1 113 80.5
Hma1.2p1_0214F.1_g090780 Hydrangea macrophylla HOM05D002168 ORTHO05D002277 1.0e-44 183.7 112 81.2
MD14G1008000 Malus domestica HOM05D002168 ORTHO05D002277 1.0e-44 183.7 113 77.9
Medtr7g086640 Medicago truncatula HOM05D002168 ORTHO05D002277 1.0e-44 183.7 113 78.8
unitig_60.g25486 Utricularia gibba HOM05D002168 ORTHO05D002277 1.0e-44 183.7 113 77.9
AUR62032008 Chenopodium quinoa HOM05D002168 ORTHO05D002277 1.3e-44 183.3 113 79.6
Lalb_Chr14g0364831 Lupinus albus HOM05D002168 ORTHO05D002277 1.3e-44 183.3 113 78.8
TPR.G34788 Trifolium pratense HOM05D002168 ORTHO05D002277 2.3e-44 182.6 113 76.1
ECA238G2164 Erigeron canadensis HOM05D002168 ORTHO05D002277 5.0e-44 181.4 113 78.8
Sp3g02680 Schrenkiella parvula HOM05D002168 ORTHO05D002277 6.6e-44 181.0 113 77.0
Actinidia37819 Actinidia chinensis HOM05D002168 ORTHO05D002277 1.5e-43 179.9 113 83.2
Thhalv10020014m.g Eutrema salsugineum HOM05D002168 ORTHO05D002277 1.5e-43 179.9 113 77.0
HPP92_014245 Vanilla planifolia HOM05D002168 ORTHO05D002277 1.5e-43 179.9 113 77.0
BcaB04g19361 Brassica carinata HOM05D002168 ORTHO05D002277 1.9e-43 179.5 113 77.0
Glyma.19G116700 Glycine max HOM05D002168 ORTHO05D002277 1.9e-43 179.5 112 78.6
Psat0s2078g0040 Pisum sativum HOM05D002168 ORTHO05D002277 1.9e-43 179.5 113 77.0
BcaC05g30255 Brassica carinata HOM05D002168 ORTHO05D002277 2.5e-43 179.1 113 76.1
A05p43660 Brassica napus HOM05D002168 ORTHO05D002277 2.5e-43 179.1 113 77.0
BraA05t23104Z Brassica rapa HOM05D002168 ORTHO05D002277 2.5e-43 179.1 113 77.0
BcaC01g04394 Brassica carinata HOM05D002168 ORTHO05D002277 3.3e-43 178.7 113 77.0
Carub.0003s0287 Capsella rubella HOM05D002168 ORTHO05D002277 4.3e-43 178.3 113 75.2
AL3G13510 Arabidopsis lyrata HOM05D002168 ORTHO05D002277 5.6e-43 177.9 113 77.0
C05p63240 Brassica napus HOM05D002168 ORTHO05D002277 5.6e-43 177.9 113 76.1
Zm00001eb300920 Zea mays HOM05D002168 ORTHO05D002277 5.6e-43 177.9 113 78.8
VMungo1383G0989 Vigna mungo HOM05D002168 ORTHO05D002277 7.3e-43 177.6 112 75.0
Phvul.001G105633 Phaseolus vulgaris HOM05D002168 ORTHO05D002277 1.6e-42 176.4 112 75.9
Sabra19G0050400 Salix brachista HOM05D002168 ORTHO05D002277 2.1e-42 176.0 140 67.1
Aqoxy1G00512 Aquilegia oxysepala HOM05D002168 ORTHO05D002277 2.8e-42 175.6 113 72.6
Aa31LG5G14220 Aethionema arabicum HOM05D002168 ORTHO05D002277 3.6e-42 175.3 113 76.1
CARHR077770 Cardamine hirsuta HOM05D002168 ORTHO05D002277 3.6e-42 175.3 113 74.3
ClCG10G015830 Citrullus lanatus HOM05D002168 ORTHO05D002277 3.6e-42 175.3 146 65.8
BolC5t34986H Brassica oleracea HOM05D002168 ORTHO05D002277 4.7e-42 174.9 113 75.2
PSO339G1487 Papaver somniferum HOM05D002168 ORTHO05D002277 4.7e-42 174.9 117 72.6
Peaxi162Scf01421g00011 Petunia axillaris HOM05D002168 ORTHO05D002277 4.7e-42 174.9 126 75.4
AT3G03710 Arabidopsis thaliana HOM05D002168 ORTHO05D002277 8.1e-42 174.1 113 76.1
PSO384G3331 Papaver somniferum HOM05D002168 ORTHO05D002277 1.1e-41 173.7 117 72.6
Lj1A1072T24 Lonicera japonica HOM05D002168 ORTHO05D002277 1.4e-41 173.3 137 66.4
SEGI_01031 Sequoiadendron giganteum HOM05D002168 ORTHO05D002277 2.0e-40 169.5 113 69.0
BraA03t12507Z Brassica rapa HOM05D002168 ORTHO05D002277 3.4e-40 168.7 123 69.9
A03p33360 Brassica napus HOM05D002168 ORTHO05D002277 2.9e-39 165.6 123 69.1
HanXRQChr14g0453641 Helianthus annuus HOM05D002168 ORTHO05D002277 1.2e-37 160.2 117 71.8
Atru.chr2.1515 Acer truncatum HOM05D002168 ORTHO05D002277 2.7e-37 159.1 92 85.9
Cpa.g.sc161.36 Carica papaya HOM05D002168 ORTHO05D002277 8.1e-34 147.5 90 83.3
HPP92_026508 Vanilla planifolia HOM05D002168 ORTHO05D002277 1.4e-33 146.7 91 78.0
Sc07g0007450 Simmondsia chinensis HOM05D002168 ORTHO05D002277 1.2e-32 143.7 92 78.3
Glyma.16G036100 Glycine max HOM05D002168 ORTHO05D002277 7.6e-32 141.0 91 76.9
Thhalv10022162m.g Eutrema salsugineum HOM05D002168 ORTHO05D002277 1.3e-31 140.2 117 64.1
AagrBONN_evm.TU.Sc2ySwM_340.482 Anthoceros agrestis HOM05D002168 ORTHO05D002277 8.4e-31 137.5 125 52.0
C03p40600 Brassica napus HOM05D002168 ORTHO05D002277 2.4e-30 136.0 115 63.5
BolC3t16325H Brassica oleracea HOM05D002168 ORTHO05D002277 2.4e-30 136.0 115 63.5
Mapoly0041s0034 Marchantia polymorpha HOM05D002168 ORTHO05D002277 7.1e-30 134.4 113 54.9
CBR_g5744 Chara braunii HOM05D002168 ORTHO05D002277 1.7e-28 129.8 113 53.1
HPP92_014138 Vanilla planifolia HOM05D002168 ORTHO05D002277 8.7e-28 127.5 113 61.1
Pp3c6_15550 Physcomitrium patens HOM05D002168 ORTHO05D002277 2.8e-26 122.5 113 49.6
SMO364G0479 Selaginella moellendorffii HOM05D002168 ORTHO05D002277 1.4e-25 120.2 113 47.8
BcaC05g29911 Brassica carinata HOM05D002168 ORTHO05D002277 7.3e-19 97.8 58 77.6
MCO09G785 Micromonas commoda HOM05D002168 ORTHO05D002277 2.8e-18 95.9 113 39.8
PRCOL_00002921 Prasinoderma coloniale HOM05D002168 ORTHO05D002277 1.1e-14 84.0 113 38.9
CBR_g30163 Chara braunii HOM05D002168 ORTHO05D002277 1.1e-09 67.4 77 46.8
Lsat_1_v5_gn_0_46020 Lactuca sativa HOM05D002168 ORTHO05D002277 1.5e-08 63.5 101 34.7
Cre04.g214501 Chlamydomonas reinhardtii HOM05D002168 ORTHO05D002277 1.7e-07 60.1 93 31.2


User provided reference genes

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