Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010651 Camellia sinensis var. sinensis HOM05D001672 ORTHO05D008029 7.4e-56 220.3 113 100.0
Actinidia31345 Actinidia chinensis HOM05D001672 ORTHO05D008029 8.0e-26 120.6 81 75.3
CiPaw.07G082900 Carya illinoinensis HOM05D001672 ORTHO05D008029 1.3e-23 113.2 80 71.2
Dinv21370 Davidia involucrata HOM05D001672 ORTHO05D008029 1.7e-23 112.8 81 70.4
Rhsim09G0128900 Rhododendron simsii HOM05D001672 ORTHO05D008029 3.7e-23 111.7 81 69.1
Oeu010169.1 Olea europaea HOM05D001672 ORTHO05D008029 4.9e-23 111.3 78 71.8
vmacro10415 Vaccinium macrocarpon HOM05D001672 ORTHO05D008029 6.4e-23 110.9 81 67.9
Manes.12G003100 Manihot esculenta HOM05D001672 ORTHO05D008029 1.1e-22 110.2 74 74.3
GSVIVG01019055001 Vitis vinifera HOM05D001672 ORTHO05D008029 1.8e-22 109.4 81 67.9
TAR362G1091 Trochodendron aralioides HOM05D001672 ORTHO05D008029 2.4e-22 109.0 80 67.5
Cfa006240 Carpinus fangiana HOM05D001672 ORTHO05D008029 3.2e-22 108.6 81 67.9
Haze_04593 Corylus avellana HOM05D000399 ORTHO05D008029 7.0e-22 107.5 79 68.4
PGR031G1216 Punica granatum HOM05D001672 ORTHO05D008029 1.2e-21 106.7 81 66.7
Sabra08G0056400 Salix brachista HOM05D001672 ORTHO05D008029 1.2e-21 106.7 81 65.4
ATR0743G112 Amborella trichopoda HOM05D001672 ORTHO05D008029 1.6e-21 106.3 81 66.7
DCAR_030007 Daucus carota HOM05D001672 ORTHO05D008029 1.6e-21 106.3 78 67.9
Sed0013113 Sechium edule HOM05D001672 ORTHO05D008029 1.6e-21 106.3 81 64.2
Potri.008G075800 Populus trichocarpa HOM05D001672 ORTHO05D008029 2.0e-21 105.9 81 65.4
THA.LOC104805706 Tarenaya hassleriana HOM05D001672 ORTHO05D008029 2.7e-21 105.5 82 61.0
MSTRG.8200 Avicennia marina HOM05D001672 ORTHO05D008029 4.6e-21 104.8 81 64.2
CsaV3_1G044280 Cucumis sativus L. HOM05D001672 ORTHO05D008029 4.6e-21 104.8 81 61.7
ECA233G5271 Erigeron canadensis HOM05D001672 ORTHO05D008029 4.6e-21 104.8 81 66.7
HanXRQChr05g0157031 Helianthus annuus HOM05D001672 ORTHO05D008029 4.6e-21 104.8 81 65.4
Lsat_1_v5_gn_8_2240 Lactuca sativa HOM05D001672 ORTHO05D008029 4.6e-21 104.8 81 64.2
SalBow6G6011 Salvia bowleyana HOM05D001672 ORTHO05D008029 4.6e-21 104.8 81 64.2
Aqoxy2G04124 Aquilegia oxysepala HOM05D001672 ORTHO05D008029 5.9e-21 104.4 76 72.4
arahy.Tifrunner.gnm1.ann1.322B5E Arachis hypogaea HOM05D001672 ORTHO05D008029 7.8e-21 104.0 81 66.7
Eucgr.B01462 Eucalyptus grandis HOM05D001672 ORTHO05D008029 1.0e-20 103.6 81 63.0
Thecc.05G187200 Theobroma cacao HOM05D001672 ORTHO05D008029 1.0e-20 103.6 82 63.4
Lalb_Chr19g0127621 Lupinus albus HOM05D001672 ORTHO05D008029 1.3e-20 103.2 81 66.7
CANSAT54G0429 Cannabis sativa HOM05D001672 ORTHO05D008029 1.7e-20 102.8 81 64.2
QL01p048021 Quercus lobata HOM05D001672 ORTHO05D008029 1.7e-20 102.8 81 65.4
Solyc04g025290.4 Solanum lycopersicum HOM05D001672 ORTHO05D008029 1.7e-20 102.8 81 63.0
Duzib106G1257 Durio zibethinus HOM05D001672 ORTHO05D008029 2.3e-20 102.4 82 62.2
Duzib177G0269 Durio zibethinus HOM05D001672 ORTHO05D008029 2.3e-20 102.4 82 62.2
Peaxi162Scf00619g00046 Petunia axillaris HOM05D001672 ORTHO05D008029 2.3e-20 102.4 81 64.2
Sc16g0010530 Simmondsia chinensis HOM05D001672 ORTHO05D008029 2.3e-20 102.4 76 68.4
arahy.Tifrunner.gnm1.ann1.5A5R3G Arachis hypogaea HOM05D001672 ORTHO05D008029 3.0e-20 102.1 81 65.4
AL7G45120 Arabidopsis lyrata HOM05D001672 ORTHO05D008029 3.9e-20 101.7 82 58.5
Sopen04g011940 Solanum pennellii HOM05D001672 ORTHO05D008029 3.9e-20 101.7 81 61.7
Carub.0007s3185 Capsella rubella HOM05D001672 ORTHO05D008029 5.0e-20 101.3 82 58.5
Nn7g37576 Nelumbo nucifera HOM05D001672 ORTHO05D008029 5.0e-20 101.3 81 64.2
Gorai.004G264100 Gossypium raimondii HOM05D001672 ORTHO05D008029 1.1e-19 100.1 82 59.8
BcaB02g08040 Brassica carinata HOM05D001672 ORTHO05D008029 1.5e-19 99.8 82 58.5
CAN.G4.22 Capsicum annuum HOM05D001672 ORTHO05D008029 1.5e-19 99.8 81 61.7
AUR62006632 Chenopodium quinoa HOM05D001672 ORTHO05D008029 1.5e-19 99.8 81 60.5
Cc09_g03960 Coffea canephora HOM05D001672 ORTHO05D008029 1.9e-19 99.4 81 61.7
Gohir.A08G227200 Gossypium hirsutum HOM05D001672 ORTHO05D008029 1.9e-19 99.4 82 59.8
Gohir.D08G247600 Gossypium hirsutum HOM05D001672 ORTHO05D008029 1.9e-19 99.4 82 58.5
Nitab4.5_0001449g0040 Nicotiana tabacum HOM05D001672 ORTHO05D008029 1.9e-19 99.4 76 65.8
Nitab4.5_0024954g0010 Nicotiana tabacum HOM05D001672 ORTHO05D008029 1.9e-19 99.4 76 65.8
AT5G36170 Arabidopsis thaliana HOM05D001672 ORTHO05D008029 2.5e-19 99.0 82 57.3
EL10Ac4g10010 Beta vulgaris HOM05D001672 ORTHO05D008029 3.3e-19 98.6 81 60.5
Duzib150G1308 Durio zibethinus HOM05D001672 ORTHO05D008029 3.3e-19 98.6 82 59.8
SGA_v2.0_scaffold122G33194 Striga asiatica HOM05D001672 ORTHO05D008029 3.3e-19 98.6 81 59.3
BcaC08g44326 Brassica carinata HOM05D001672 ORTHO05D008029 4.3e-19 98.2 82 57.3
A05p16360 Brassica napus HOM05D001672 ORTHO05D008029 4.3e-19 98.2 82 57.3
C06p17510 Brassica napus HOM05D001672 ORTHO05D008029 4.3e-19 98.2 82 57.3
BolC6t36945H Brassica oleracea HOM05D001672 ORTHO05D008029 4.3e-19 98.2 82 57.3
BraA05t20544Z Brassica rapa HOM05D001672 ORTHO05D008029 4.3e-19 98.2 82 57.3
Hund21839 Selenicereus undatus HOM05D001672 ORTHO05D008029 4.3e-19 98.2 81 61.7
Aa31LG9G17900 Aethionema arabicum HOM05D001672 ORTHO05D008029 5.6e-19 97.8 75 62.7
Prupe.6G363800 Prunus persica HOM05D001672 ORTHO05D008029 5.6e-19 97.8 81 59.3
Sp7g05990 Schrenkiella parvula HOM05D001672 ORTHO05D008029 5.6e-19 97.8 82 56.1
Atru.chr12.1702 Acer truncatum HOM05D001672 ORTHO05D008029 7.3e-19 97.4 77 63.6
AUR62000284 Chenopodium quinoa HOM05D001672 ORTHO05D008029 7.3e-19 97.4 81 59.3
VMungo1383G0488 Vigna mungo HOM05D001672 ORTHO05D008029 9.5e-19 97.1 81 61.7
Ah.04g159150 Amaranthus hybridus HOM05D000399 ORTHO05D000304 1.6e-18 96.3 81 59.3
Lj1g0017266 Lotus japonicus HOM05D001672 ORTHO05D008029 1.6e-18 96.3 94 54.3
Psat3g102320 Pisum sativum HOM05D001672 ORTHO05D008029 1.6e-18 96.3 81 60.5
RcHm_v2.0_Chr3g0447561 Rosa chinensis HOM05D001672 ORTHO05D008029 1.6e-18 96.3 81 59.3
CDE07G1999 Ceratophyllum demersum HOM05D001672 ORTHO05D008029 2.1e-18 95.9 81 60.5
Glyma.09G248300 Glycine max HOM05D001672 ORTHO05D008029 2.1e-18 95.9 81 61.7
Medtr7g080430 Medicago truncatula HOM05D001672 ORTHO05D008029 3.6e-18 95.1 81 60.5
Thhalv10004205m.g Eutrema salsugineum HOM05D001672 ORTHO05D008029 4.7e-18 94.7 81 55.6
PSO210G6757 Papaver somniferum HOM05D001672 ORTHO05D008029 4.7e-18 94.7 81 55.6
TPR.G32008 Trifolium pratense HOM05D001672 ORTHO05D008029 4.7e-18 94.7 81 59.3
PSO832G2456 Papaver somniferum HOM05D001672 ORTHO05D008029 6.2e-18 94.4 81 55.6
FAN02G0822 Fragaria x ananassa HOM05D001672 ORTHO05D008029 1.1e-17 93.6 76 60.5
Ca_08007_v3 Cicer arietinum L. HOM05D001672 ORTHO05D008029 1.4e-17 93.2 81 58.0
Phvul.008G052200 Phaseolus vulgaris HOM05D001672 ORTHO05D008029 1.4e-17 93.2 81 58.0
FvH4_6g00190 Fragaria vesca HOM05D001672 ORTHO05D008029 1.8e-17 92.8 81 55.6
FAN14G4355 Fragaria x ananassa HOM05D001672 ORTHO05D008029 4.0e-17 91.7 81 55.6
MD12G1263000 Malus domestica HOM05D001672 ORTHO05D008029 4.0e-17 91.7 76 60.5
MD04G1247400 Malus domestica HOM05D001672 ORTHO05D008029 5.2e-17 91.3 76 60.5
TWI36G0167 Tripterygium wilfordii HOM05D001672 ORTHO05D008029 5.2e-17 91.3 81 55.6
TWI36G0981 Tripterygium wilfordii HOM05D001672 ORTHO05D008029 5.2e-17 91.3 81 55.6
Cpa.g.sc123.43 Carica papaya HOM05D001672 ORTHO05D008029 8.9e-17 90.5 74 59.5
SEGI_18756 Sequoiadendron giganteum HOM05D001672 ORTHO05D008029 8.9e-17 90.5 74 56.8
Zm00001eb323570 Zea mays HOM05D001672 ORTHO05D008029 1.2e-16 90.1 81 56.8
FAN09G4699 Fragaria x ananassa HOM05D000399 ORTHO05D000304 3.4e-16 88.6 80 55.0
Os07g0546600 Oryza sativa ssp. japonica HOM05D001672 ORTHO05D008029 1.3e-15 86.7 81 51.9
AagrBONN_evm.TU.Sc2ySwM_368.638 Anthoceros agrestis HOM05D001672 ORTHO05D008029 3.0e-12 75.5 74 52.7
SMO356G0043 Selaginella moellendorffii HOM05D001672 ORTHO05D008029 6.6e-12 74.3 71 50.7
Pp3c3_11640 Physcomitrium patens HOM05D001672 ORTHO05D008029 2.6e-08 62.4 74 43.2
ECA236G2262 Erigeron canadensis HOM05D001672 ORTHO05D008029 6.4e-07 57.8 50 62.0
CBR_g54104 Chara braunii HOM05D001672 ORTHO05D008029 5.4e-06 54.7 76 36.8


User provided reference genes

Program Settings