Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009884 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D109784 1.8e-75 285.8 140 100.0
CSS0033827 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D000921 2.0e-34 149.4 110 70.9
CSS0032086 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D000921 2.6e-34 149.1 110 71.8
CSS0042580 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D009565 5.8e-18 94.7 110 51.8
vmacro07950 Vaccinium macrocarpon HOM05D000949 ORTHO05D009565 1.9e-16 89.7 110 49.1
Rhsim04G0241500 Rhododendron simsii HOM05D000949 ORTHO05D009565 1.6e-15 86.7 110 48.2
Hma1.2p1_0013F.1_g008290 Hydrangea macrophylla HOM05D000949 ORTHO05D009565 4.6e-15 85.1 110 45.5
Dinv44261 Davidia involucrata HOM05D000949 ORTHO05D009565 6.0e-15 84.7 110 46.4
Actinidia04611 Actinidia chinensis HOM05D000949 ORTHO05D009565 7.9e-15 84.3 110 45.5
Actinidia31565 Actinidia chinensis HOM05D000949 ORTHO05D009565 7.9e-15 84.3 110 45.5
TAR362G0920 Trochodendron aralioides HOM05D000949 ORTHO05D009565 1.8e-14 83.2 110 45.5
Manes.03G207200 Manihot esculenta HOM05D000949 ORTHO05D009565 2.3e-14 82.8 110 41.8
Sopen12g033860 Solanum pennellii HOM05D000949 ORTHO05D009565 2.3e-14 82.8 110 42.7
Cc03_g00580 Coffea canephora HOM05D000949 ORTHO05D009565 3.0e-14 82.4 110 42.7
COL.COLO4_34576 Corchorus olitorius HOM05D000949 ORTHO05D009565 3.9e-14 82.0 110 43.6
PGSC0003DMG400004615 Solanum tuberosum HOM05D000949 ORTHO05D009565 3.9e-14 82.0 110 42.7
CAN.G484.70 Capsicum annuum HOM05D000949 ORTHO05D009565 5.1e-14 81.6 110 41.8
Haze_01340 Corylus avellana HOM05D000949 ORTHO05D009565 5.1e-14 81.6 110 43.6
Nitab4.5_0002294g0110 Nicotiana tabacum HOM05D000949 ORTHO05D009565 5.1e-14 81.6 110 41.8
GSVIVG01034960001 Vitis vinifera HOM05D000949 ORTHO05D009565 5.1e-14 81.6 110 41.8
Nn3g21781 Nelumbo nucifera HOM05D000949 ORTHO05D009565 8.7e-14 80.9 110 44.5
MBI19_g03269_MAGBIO Magnolia biondii HOM05D000949 ORTHO05D009565 1.1e-13 80.5 110 44.5
THA.LOC104818875 Tarenaya hassleriana HOM05D000949 ORTHO05D009565 1.1e-13 80.5 110 42.7
Cfa015282 Carpinus fangiana HOM05D000949 ORTHO05D009565 1.5e-13 80.1 110 42.7
CiPaw.01G135500 Carya illinoinensis HOM05D000949 ORTHO05D009565 1.5e-13 80.1 110 40.9
Actinidia18472 Actinidia chinensis HOM05D000949 ORTHO05D009565 1.9e-13 79.7 110 44.5
Nitab4.5_0002150g0020 Nicotiana tabacum HOM05D000949 ORTHO05D009565 2.5e-13 79.3 110 41.8
Lj6g0003299 Lotus japonicus HOM05D000949 ORTHO05D009565 4.3e-13 78.6 110 42.7
QL06p012857 Quercus lobata HOM05D000949 ORTHO05D009565 4.3e-13 78.6 109 44.0
VMungo0540G1062 Vigna mungo HOM05D000949 ORTHO05D009565 4.3e-13 78.6 110 41.8
Carub.0003s0603 Capsella rubella HOM05D000949 ORTHO05D009565 5.7e-13 78.2 110 41.8
Ciclev10004938m.g Citrus clementina HOM05D000949 ORTHO05D009565 5.7e-13 78.2 110 41.8
Peaxi162Scf00228g00621 Petunia axillaris HOM05D000949 ORTHO05D009565 5.7e-13 78.2 110 39.1
AL3G17600 Arabidopsis lyrata HOM05D000949 ORTHO05D009565 7.4e-13 77.8 110 40.9
Lalb_Chr15g0089121 Lupinus albus HOM05D000949 ORTHO05D009565 9.6e-13 77.4 110 40.9
PSO170G2901 Papaver somniferum HOM05D000949 ORTHO05D009565 9.6e-13 77.4 110 41.8
Phvul.006G119900 Phaseolus vulgaris HOM05D000949 ORTHO05D009565 9.6e-13 77.4 110 41.8
TAR365G1047 Trochodendron aralioides HOM05D000949 ORTHO05D009565 9.6e-13 77.4 110 41.8
A05p41480 Brassica napus HOM05D000949 ORTHO05D009565 1.3e-12 77.0 110 40.0
BraA05t22868Z Brassica rapa HOM05D000949 ORTHO05D009565 1.3e-12 77.0 110 40.0
Ca_17170_v3 Cicer arietinum L. HOM05D000949 ORTHO05D009565 1.3e-12 77.0 110 40.9
TAR383G0050 Trochodendron aralioides HOM05D000949 ORTHO05D009565 1.3e-12 77.0 110 43.6
AT3G06560 Arabidopsis thaliana HOM05D000949 ORTHO05D009565 1.6e-12 76.6 110 40.0
CiPaw.01G135700 Carya illinoinensis HOM05D000949 ORTHO05D009565 2.8e-12 75.9 110 40.0
Lalb_Chr20g0120731 Lupinus albus HOM05D000949 ORTHO05D009565 2.8e-12 75.9 110 40.0
EL10Ac3g05543 Beta vulgaris HOM05D000949 ORTHO05D009565 3.7e-12 75.5 110 39.1
Sp3g05500 Schrenkiella parvula HOM05D000949 ORTHO05D009565 3.7e-12 75.5 110 40.0
Atru.chr4.3058 Acer truncatum HOM05D000949 ORTHO05D009565 4.8e-12 75.1 110 40.9
BolC5t34727H Brassica oleracea HOM05D000949 ORTHO05D009565 4.8e-12 75.1 110 39.1
CARHR081110 Cardamine hirsuta HOM05D000949 ORTHO05D009565 6.3e-12 74.7 110 39.1
HanXRQChr13g0394751 Helianthus annuus HOM05D000949 ORTHO05D009565 6.3e-12 74.7 110 40.0
arahy.Tifrunner.gnm1.ann1.7IYA67 Arachis hypogaea HOM05D000949 ORTHO05D009565 8.2e-12 74.3 110 41.8
arahy.Tifrunner.gnm1.ann1.UM9WQL Arachis hypogaea HOM05D000949 ORTHO05D009565 8.2e-12 74.3 110 41.8
C05p60670 Brassica napus HOM05D000949 ORTHO05D009565 8.2e-12 74.3 110 38.2
TWI09G0276 Tripterygium wilfordii HOM05D000949 ORTHO05D009565 1.1e-11 73.9 110 39.1
Lsat_1_v5_gn_6_341 Lactuca sativa HOM05D000949 ORTHO05D009565 1.4e-11 73.6 110 40.9
PSO357G0461 Papaver somniferum HOM05D000949 ORTHO05D009565 1.4e-11 73.6 110 40.0
Ah.07g201620 Amaranthus hybridus HOM05D000949 ORTHO05D009565 1.8e-11 73.2 110 39.1
Lalb_Chr18g0058591 Lupinus albus HOM05D000949 ORTHO05D009565 1.8e-11 73.2 110 40.0
PGSC0003DMG400029059 Solanum tuberosum HOM05D000949 ORTHO05D009565 1.8e-11 73.2 110 38.2
Gohir.A02G055700 Gossypium hirsutum HOM05D000949 ORTHO05D009565 2.4e-11 72.8 110 40.0
AUR62032782 Chenopodium quinoa HOM05D000949 ORTHO05D009565 4.1e-11 72.0 109 39.4
AUR62005731 Chenopodium quinoa HOM05D000949 ORTHO05D009565 5.3e-11 71.6 110 39.1
Peaxi162Scf01160g00149 Petunia axillaris HOM05D000949 ORTHO05D009565 5.3e-11 71.6 46 71.7
Sc13g0007150 Simmondsia chinensis HOM05D000949 ORTHO05D009565 5.3e-11 71.6 110 38.2
Sopen01g023750 Solanum pennellii HOM05D000949 ORTHO05D009565 5.3e-11 71.6 110 37.3
AUR62028830 Chenopodium quinoa HOM05D000949 ORTHO05D009565 6.9e-11 71.2 110 39.1
Solyc12g099180.3 Solanum lycopersicum HOM05D000949 ORTHO05D009565 6.9e-11 71.2 46 71.7
Cpa.g.sc9.23 Carica papaya HOM05D000949 ORTHO05D009565 1.2e-10 70.5 44 72.7
AUR62016239 Chenopodium quinoa HOM05D000949 ORTHO05D009565 1.5e-10 70.1 109 38.5
Gorai.005G068400 Gossypium raimondii HOM05D000949 ORTHO05D009565 1.5e-10 70.1 131 34.4
Solyc01g058260.4 Solanum lycopersicum HOM05D000949 ORTHO05D009565 1.5e-10 70.1 110 37.3
MSTRG.10165 Avicennia marina HOM05D000949 ORTHO05D009565 2.6e-10 69.3 110 38.2
Hund11989 Selenicereus undatus HOM05D000949 ORTHO05D009565 2.6e-10 69.3 109 37.6
Aa31LG5G17110 Aethionema arabicum HOM05D000949 ORTHO05D009565 3.4e-10 68.9 110 36.4
Gohir.D02G060900 Gossypium hirsutum HOM05D000949 ORTHO05D009565 5.0e-09 65.1 131 33.6
Gorai.005G068500 Gossypium raimondii HOM05D000949 ORTHO05D009565 5.0e-09 65.1 110 37.3
EL10Ac3g05918 Beta vulgaris HOM05D000949 ORTHO05D009565 4.2e-08 62.0 45 60.0
HanXRQChr09g0250471 Helianthus annuus HOM05D000949 ORTHO05D009565 9.3e-08 60.8 138 31.9
Sp2g21980 Schrenkiella parvula HOM05D000949 ORTHO05D001276 6.1e-07 58.2 63 50.8
Aa31LG4G4050 Aethionema arabicum HOM05D000949 ORTHO05D001276 1.0e-06 57.4 63 50.8
Sp2g12720 Schrenkiella parvula HOM05D000949 ORTHO05D001276 1.0e-06 57.4 51 56.9
AT1G17980 Arabidopsis thaliana HOM05D000949 ORTHO05D001276 2.3e-06 56.2 63 50.8
CARHR018590 Cardamine hirsuta HOM05D000949 ORTHO05D001276 2.3e-06 56.2 65 47.7
AL1G30340 Arabidopsis lyrata HOM05D000949 ORTHO05D001276 3.9e-06 55.5 63 49.2
A06p44530 Brassica napus HOM05D000949 ORTHO05D001276 3.9e-06 55.5 60 51.7
C07p32100 Brassica napus HOM05D000949 ORTHO05D001276 3.9e-06 55.5 63 49.2
Carub.0001s1768 Capsella rubella HOM05D000949 ORTHO05D001276 3.9e-06 55.5 63 49.2
Thhalv10006945m.g Eutrema salsugineum HOM05D000949 ORTHO05D001276 3.9e-06 55.5 63 49.2
THA.LOC104812155 Tarenaya hassleriana HOM05D000949 ORTHO05D001276 3.9e-06 55.5 45 60.0
BcaC06g31321 Brassica carinata HOM05D000949 ORTHO05D001276 5.1e-06 55.1 63 50.8
BraA06t27327Z Brassica rapa HOM05D000949 ORTHO05D001276 5.1e-06 55.1 63 50.8
Aa31LG7G3030 Aethionema arabicum HOM05D000949 ORTHO05D001276 6.7e-06 54.7 63 49.2
BcaC06g34200 Brassica carinata HOM05D000949 ORTHO05D001276 6.7e-06 54.7 63 50.8
BcaC06g34205 Brassica carinata HOM05D000949 ORTHO05D001276 6.7e-06 54.7 63 50.8
C07p31690 Brassica napus HOM05D000949 ORTHO05D001276 6.7e-06 54.7 63 50.8
BolC7t43708H Brassica oleracea HOM05D000949 ORTHO05D001276 6.7e-06 54.7 63 50.8
A09p60150 Brassica napus HOM05D000949 ORTHO05D001276 8.7e-06 54.3 63 47.6
BolC8t51905H Brassica oleracea HOM05D000949 ORTHO05D001276 8.7e-06 54.3 63 47.6
BraA09t41384Z Brassica rapa HOM05D000949 ORTHO05D001276 8.7e-06 54.3 63 47.6
ECA246G5275 Erigeron canadensis HOM05D000949 ORTHO05D009565 8.7e-06 54.3 110 30.9
FAN08G0431 Fragaria x ananassa HOM05D000949 ORTHO05D001276 8.7e-06 54.3 45 57.8
MD06G1222200 Malus domestica HOM05D000949 ORTHO05D001276 8.7e-06 54.3 63 49.2
MD14G1231300 Malus domestica HOM05D000949 ORTHO05D001276 8.7e-06 54.3 63 49.2
RcHm_v2.0_Chr7g0179251 Rosa chinensis HOM05D000949 ORTHO05D001276 8.7e-06 54.3 45 57.8
Sp1g16040 Schrenkiella parvula HOM05D000949 ORTHO05D001276 8.7e-06 54.3 63 47.6
Zm00001eb052460 Zea mays HOM05D000949 ORTHO05D001276 8.7e-06 54.3 60 46.7


User provided reference genes

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