Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008302 Camellia sinensis var. sinensis HOM05D001195 ORTHO05D001138 1.7e-218 762.3 375 100.0
Actinidia08848 Actinidia chinensis HOM05D001195 ORTHO05D001138 3.2e-87 326.2 324 59.0
Dinv11121 Davidia involucrata HOM05D001195 ORTHO05D001138 4.6e-86 322.4 327 57.5
Rhsim12G0171000 Rhododendron simsii HOM05D006000 ORTHO05D007749 7.9e-86 321.6 320 57.8
vmacro16695 Vaccinium macrocarpon HOM05D001195 ORTHO05D001138 2.2e-80 303.5 323 56.0
Dinv38491 Davidia involucrata HOM05D001195 ORTHO05D001138 1.3e-75 287.7 245 62.9
GSVIVG01007580001 Vitis vinifera HOM05D001195 ORTHO05D001138 1.8e-69 267.3 327 48.6
Lj9C473T2 Lonicera japonica HOM05D001195 ORTHO05D001138 1.5e-65 254.2 331 45.0
Haze_07293 Corylus avellana HOM05D001195 ORTHO05D001138 6.1e-62 242.3 327 45.3
Cfa018909 Carpinus fangiana HOM05D001195 ORTHO05D001138 5.7e-60 235.7 339 43.4
QL10p005693 Quercus lobata HOM05D001195 ORTHO05D001138 9.1e-58 228.4 311 44.7
TAR629G0985 Trochodendron aralioides HOM05D001195 ORTHO05D001138 1.2e-57 228.0 332 44.6
Potri.012G091700 Populus trichocarpa HOM05D001195 ORTHO05D001138 1.9e-55 220.7 307 46.3
MD14G1166000 Malus domestica HOM05D001195 ORTHO05D001138 5.5e-55 219.2 316 44.0
Manes.06G113300 Manihot esculenta HOM05D001195 ORTHO05D001138 5.5e-55 219.2 339 44.2
Sabra12G0066400 Salix brachista HOM05D001195 ORTHO05D001138 2.7e-54 216.9 307 45.3
DCAR_007464 Daucus carota HOM05D001195 ORTHO05D001138 3.6e-54 216.5 333 41.1
MD06G1160000 Malus domestica HOM05D001195 ORTHO05D001138 6.1e-54 215.7 335 43.3
Oeu049134.1 Olea europaea HOM05D001195 ORTHO05D001138 7.9e-54 215.3 322 41.6
Atru.chr9.984 Acer truncatum HOM05D001195 ORTHO05D001138 2.3e-53 213.8 336 41.1
Nitab4.5_0001360g0180 Nicotiana tabacum HOM05D001195 ORTHO05D001138 5.1e-53 212.6 300 45.3
Ciclev10018826m.g Citrus clementina HOM05D001195 ORTHO05D001138 2.0e-52 210.7 333 42.9
Nitab4.5_0006717g0010 Nicotiana tabacum HOM05D001195 ORTHO05D001138 2.6e-52 210.3 321 43.0
Nn3g16618 Nelumbo nucifera HOM05D001195 ORTHO05D001138 9.7e-52 208.4 340 40.6
RcHm_v2.0_Chr7g0191751 Rosa chinensis HOM05D001195 ORTHO05D001138 1.1e-50 204.9 345 40.6
Solyc03g111680.3 Solanum lycopersicum HOM05D001195 ORTHO05D001138 1.8e-50 204.1 321 42.7
Sopen03g030800 Solanum pennellii HOM05D001195 ORTHO05D001138 1.8e-50 204.1 321 42.7
FvH4_5g06841 Fragaria vesca HOM05D001195 ORTHO05D001138 3.5e-49 199.9 346 39.9
FAN18G4100 Fragaria x ananassa HOM05D001195 ORTHO05D001138 4.5e-49 199.5 346 39.9
PGSC0003DMG400015161 Solanum tuberosum HOM05D001195 ORTHO05D001138 7.7e-49 198.7 307 44.0
CAN.G472.52 Capsicum annuum HOM05D001195 ORTHO05D001138 1.3e-48 198.0 306 43.1
Cpa.g.sc4.39 Carica papaya HOM05D001195 ORTHO05D001138 2.9e-48 196.8 323 40.6
Thecc.03G120000 Theobroma cacao HOM05D001195 ORTHO05D001138 2.9e-48 196.8 323 39.6
FAN08G2082 Fragaria x ananassa HOM05D001195 ORTHO05D001138 1.5e-47 194.5 346 39.6
Cc04_g10730 Coffea canephora HOM05D001195 ORTHO05D001138 2.5e-47 193.7 317 41.0
Nn4g22512 Nelumbo nucifera HOM05D001195 ORTHO05D001138 1.6e-46 191.0 316 38.9
Duzib068G1230 Durio zibethinus HOM05D001195 ORTHO05D001138 1.5e-44 184.5 321 38.6
PSO782G1855 Papaver somniferum HOM05D001195 ORTHO05D001138 1.5e-44 184.5 353 39.4
TWI39G0685 Tripterygium wilfordii HOM05D001195 ORTHO05D001138 2.0e-44 184.1 326 39.3
PSO063G0927 Papaver somniferum HOM05D001195 ORTHO05D001138 2.6e-44 183.7 319 41.1
Duzib205G1555 Durio zibethinus HOM05D001195 ORTHO05D001138 1.3e-43 181.4 325 38.5
Potri.015G088100 Populus trichocarpa HOM05D001195 ORTHO05D001138 1.7e-43 181.0 283 42.4
MSTRG.9701 Avicennia marina HOM05D001195 ORTHO05D001138 6.3e-43 179.1 295 42.0
FAN13G1627 Fragaria x ananassa HOM05D001195 ORTHO05D001138 1.4e-42 177.9 330 38.8
Eucgr.K02767 Eucalyptus grandis HOM05D001195 ORTHO05D001138 1.8e-42 177.6 340 39.1
Sabra15G0111200 Salix brachista HOM05D006000 ORTHO05D007749 3.1e-42 176.8 283 44.2
CiPaw.12G034100 Carya illinoinensis HOM05D001195 ORTHO05D001138 1.2e-41 174.9 281 41.3
CiPaw.12G034000 Carya illinoinensis HOM05D001195 ORTHO05D001138 5.9e-41 172.6 279 40.9
TWI14G1109 Tripterygium wilfordii HOM05D001195 ORTHO05D001138 2.2e-40 170.6 299 40.8
MSTRG.23187 Avicennia marina HOM05D001195 ORTHO05D001138 2.9e-40 170.2 231 47.2
Gohir.A07G054400 Gossypium hirsutum HOM05D001195 ORTHO05D001138 7.2e-39 165.6 310 39.7
Gohir.D07G058700 Gossypium hirsutum HOM05D001195 ORTHO05D001138 1.2e-38 164.9 301 39.9
Peaxi162Scf00089g00938 Petunia axillaris HOM05D001195 ORTHO05D001138 2.1e-38 164.1 230 43.9
Gorai.001G062200 Gossypium raimondii HOM05D001195 ORTHO05D001138 3.0e-37 160.2 301 39.2
CANSAT80G2654 Cannabis sativa HOM05D001195 ORTHO05D001138 5.2e-37 159.5 335 36.4
FAN04G0526 Fragaria x ananassa HOM05D000464 ORTHO05D006292 6.8e-37 159.1 236 42.4
AUR62001256 Chenopodium quinoa HOM05D001195 ORTHO05D001138 4.4e-36 156.4 333 37.8
Lj4g0027334 Lotus japonicus HOM05D001195 ORTHO05D001138 9.8e-36 155.2 243 44.4
Sc04g0001140 Simmondsia chinensis HOM05D001195 ORTHO05D001138 9.8e-36 155.2 338 36.7
AUR62025752 Chenopodium quinoa HOM05D001195 ORTHO05D001138 1.3e-35 154.8 334 38.3
Aqoxy5G03623 Aquilegia oxysepala HOM05D001195 ORTHO05D001138 2.8e-35 153.7 319 34.5
Medtr4g104350 Medicago truncatula HOM05D001195 ORTHO05D001138 6.3e-35 152.5 293 38.2
Prupe.5G160500 Prunus persica HOM05D001195 ORTHO05D001138 6.3e-35 152.5 178 50.0
Phvul.009G170400 Phaseolus vulgaris HOM05D001195 ORTHO05D001138 8.3e-35 152.1 309 32.7
Glyma.05G044100 Glycine max HOM05D001195 ORTHO05D001138 1.8e-34 151.0 311 36.7
Ah.08g218340 Amaranthus hybridus HOM05D001195 ORTHO05D001138 2.4e-34 150.6 329 38.0
Glyma.17G126600 Glycine max HOM05D001195 ORTHO05D001138 3.1e-34 150.2 312 37.2
Phvul.003G207500 Phaseolus vulgaris HOM05D001195 ORTHO05D001138 3.1e-34 150.2 311 38.3
PGR044G1551 Punica granatum HOM05D001195 ORTHO05D001138 7.0e-34 149.1 321 36.4
arahy.Tifrunner.gnm1.ann1.KRCY3Y Arachis hypogaea HOM05D001195 ORTHO05D001138 2.0e-33 147.5 277 36.5
Glyma.06G174600 Glycine max HOM05D001195 ORTHO05D001138 2.7e-33 147.1 331 31.4
MBI06_g12149_MAGBIO Magnolia biondii HOM05D001195 ORTHO05D001138 2.7e-33 147.1 324 36.1
arahy.Tifrunner.gnm1.ann1.PIT7JA Arachis hypogaea HOM05D001195 ORTHO05D001138 3.5e-33 146.7 281 37.7
Hund05619 Selenicereus undatus HOM05D001195 ORTHO05D001138 3.5e-33 146.7 300 38.7
Ca_26534_v3 Cicer arietinum L. HOM05D001195 ORTHO05D001138 4.5e-33 146.4 292 37.7
SGA_v2.0_scaffold25G10786 Striga asiatica HOM05D001195 ORTHO05D001138 1.0e-32 145.2 232 42.2
VMungo1309G0687 Vigna mungo HOM05D001195 ORTHO05D001138 1.7e-32 144.4 314 31.5
Actinidia36772 Actinidia chinensis HOM05D001195 ORTHO05D001138 3.8e-32 143.3 176 51.7
EL10Ac7g18047 Beta vulgaris HOM05D001195 ORTHO05D001138 6.5e-32 142.5 332 36.7
Glyma.04G191200 Glycine max HOM05D001195 ORTHO05D001138 8.5e-32 142.1 305 33.1
Lalb_Chr07g0183201 Lupinus albus HOM05D001195 ORTHO05D001138 2.5e-31 140.6 278 37.1
VMungo1215G2764 Vigna mungo HOM05D001195 ORTHO05D001138 4.2e-31 139.8 310 37.1
Migut.O00222 Erythranthe guttata HOM05D001195 ORTHO05D001138 9.4e-31 138.7 247 40.1
Psat4g063880 Pisum sativum HOM05D001195 ORTHO05D001138 8.0e-30 135.6 297 36.0
Lj1g0009618 Lotus japonicus HOM05D001195 ORTHO05D001138 8.8e-29 132.1 278 34.9
RcHm_v2.0_Chr7g0232131 Rosa chinensis HOM05D001195 ORTHO05D001138 2.4e-26 124.0 180 46.1
Ca_16103_v3 Cicer arietinum L. HOM05D001195 ORTHO05D001138 7.0e-26 122.5 287 32.4
Ca_30079_v3 Cicer arietinum L. HOM05D001195 ORTHO05D001138 7.0e-26 122.5 287 32.4
Oeu053500.1 Olea europaea HOM05D001195 ORTHO05D001138 1.6e-25 121.3 232 37.1
unitig_61.g26466 Utricularia gibba HOM05D001195 ORTHO05D001138 4.5e-25 119.8 277 34.3
TPR.G37499 Trifolium pratense HOM05D001195 ORTHO05D001138 7.7e-25 119.0 198 41.4
ECA232G2468 Erigeron canadensis HOM05D001195 ORTHO05D001138 1.0e-24 118.6 286 34.3
SalBow8G2987 Salvia bowleyana HOM05D001195 ORTHO05D001138 3.8e-24 116.7 226 38.1
HanXRQChr09g0272761 Helianthus annuus HOM05D001195 ORTHO05D001138 5.0e-24 116.3 301 32.6
Medtr3g075260 Medicago truncatula HOM05D001195 ORTHO05D001138 4.2e-23 113.2 279 31.2
Psat5g141040 Pisum sativum HOM05D001195 ORTHO05D001138 9.5e-23 112.1 271 31.0
unitig_26.g9612 Utricularia gibba HOM05D001195 ORTHO05D001138 1.0e-21 108.6 227 38.8
Lsat_1_v5_gn_4_78221 Lactuca sativa HOM05D001195 ORTHO05D001138 8.9e-21 105.5 280 33.9
TPR.G38650 Trifolium pratense HOM05D001195 ORTHO05D001138 1.7e-19 101.3 287 30.0
Sp7g22770 Schrenkiella parvula HOM05D001195 ORTHO05D001138 4.1e-18 96.7 181 39.2
AL7G28400 Arabidopsis lyrata HOM05D001195 ORTHO05D001138 5.4e-18 96.3 159 42.8
Aa31LG7G11050 Aethionema arabicum HOM05D001195 ORTHO05D001138 7.0e-18 95.9 152 41.4
BraA01t01546Z Brassica rapa HOM05D001195 ORTHO05D001138 9.2e-18 95.5 170 40.0
THA.LOC104811607 Tarenaya hassleriana HOM05D001195 ORTHO05D001138 9.2e-18 95.5 246 34.6
AT4G24790 Arabidopsis thaliana HOM05D001195 ORTHO05D001138 1.2e-17 95.1 169 41.4
C01p20090 Brassica napus HOM05D001195 ORTHO05D001138 1.2e-17 95.1 171 39.2
A01p16100 Brassica napus HOM05D001195 ORTHO05D001138 2.0e-17 94.4 170 39.4
THA.LOC104825000 Tarenaya hassleriana HOM05D001195 ORTHO05D001138 5.9e-17 92.8 217 34.6
BcaNung05732 Brassica carinata HOM05D001195 ORTHO05D001138 7.8e-17 92.4 225 36.0
Carub.0007s1627 Capsella rubella HOM05D001195 ORTHO05D001138 1.0e-16 92.0 181 36.5
CARHR232170 Cardamine hirsuta HOM05D001195 ORTHO05D001138 1.0e-16 92.0 181 37.0
Thhalv10024379m.g Eutrema salsugineum HOM05D001195 ORTHO05D001138 1.3e-16 91.7 195 37.9
BolC1t01938H Brassica oleracea HOM05D001195 ORTHO05D001138 6.6e-16 89.4 172 38.4
Os12g0289600 Oryza sativa ssp. japonica HOM05D001195 ORTHO05D001138 1.5e-15 88.2 304 30.3
BcaC09g50829 Brassica carinata HOM05D001195 ORTHO05D001138 1.9e-15 87.8 171 36.8
A03p55540 Brassica napus HOM05D001195 ORTHO05D001138 4.3e-15 86.7 167 37.7
BraA03t14624Z Brassica rapa HOM05D001195 ORTHO05D001138 4.3e-15 86.7 167 37.7
ATR0824G094 Amborella trichopoda HOM05D001195 ORTHO05D001138 5.6e-15 86.3 269 28.3
BolC7t45869H Brassica oleracea HOM05D001195 ORTHO05D001138 5.6e-15 86.3 212 36.8
BcaC06g32858 Brassica carinata HOM05D001195 ORTHO05D001138 7.3e-15 85.9 170 37.1
C07p53790 Brassica napus HOM05D001195 ORTHO05D001138 9.5e-15 85.5 212 36.3
Zm00001eb079340 Zea mays HOM05D001195 ORTHO05D001138 2.6e-12 77.4 305 27.5
Zm00001eb425120 Zea mays HOM05D001195 ORTHO05D001138 3.4e-12 77.0 305 30.2
CDE09G0792 Ceratophyllum demersum HOM05D006000 ORTHO05D007749 4.9e-11 73.2 166 33.1
SEGI_28438 Sequoiadendron giganteum HOM05D001195 ORTHO05D001138 1.0e-08 65.5 191 29.8
CDE07G0735 Ceratophyllum demersum HOM05D001195 ORTHO05D001138 3.0e-08 63.9 357 24.1
SEGI_40104 Sequoiadendron giganteum HOM05D001195 ORTHO05D001138 1.6e-06 58.2 149 31.5


User provided reference genes

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