Gene: FAN04G0526
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN04G0526
- Transcript Identifier FAN04G0526.1
- Gene Type Coding gene
- Location Fvb5-4 : 3753510-3764381 : negative
Gene Family Information
- ID HOM05D000464
- #Genes/#Species 1137/100
- Phylogenetic origin
- ID ORTHO05D006292
- #Genes/#Species 145/92
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id augustus_masked-Fvb5-4-processed-gene-37.19.v1.0.a1
- pacid 50460339
Descriptions
- Description PF00400//PF08614//PF12695//PF13177 - WD domain, G-beta repeat (WD40) // Autophagy protein 16 (ATG16) (ATG16) // Alpha/beta hydrolase family (Abhydrolase_5) // DNA polymerase III, delta subunit (DNA_pol3_delta2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006260 | IEA | InterPro | DNA replication |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003887 | IEA | InterPro | DNA-directed DNA polymerase activity | |
| GO:0005524 | IEA | InterPro | ATP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009360 | IEA | InterPro | DNA polymerase III complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001680 | WD40 repeat |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR029058 | Alpha/Beta hydrolase fold |
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR045085 | DNA polymerase III, subunit gamma/tau, helical lid domain |
| IPR008921 | DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal |
| IPR020472 | G-protein beta WD-40 repeat |
| IPR003593 | AAA+ ATPase domain |
| IPR012763 | DNA polymerase III, subunit gamma/ tau, N-terminal |
| IPR013923 | Autophagy-related protein 16 |
| Mapman id | Description |
|---|---|
| 19.3.3.3.3 | Protein homeostasis.autophagy.phagophore expansion.ATG12-ATG5-ATG16 conjugation system.regulatory factor (ATG16) |