Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 0.0e+00 1359.0 673 100.0
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 0.0e+00 1181.8 688 87.1
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 0.0e+00 1137.5 694 83.0
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 0.0e+00 1092.0 688 79.5
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 1.8e-311 1072.0 687 79.9
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 5.0e-309 1063.9 685 78.8
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 1.1e-308 1062.8 685 78.1
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 9.5e-308 1059.7 684 78.5
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 2.8e-307 1058.1 659 78.5
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 2.3e-306 1055.0 689 77.8
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 3.1e-306 1054.7 686 78.1
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 4.0e-306 1054.3 682 77.9
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 4.0e-306 1054.3 676 78.3
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 1.5e-305 1052.4 682 78.2
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 2.0e-305 1052.0 689 76.9
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 4.9e-304 1047.3 690 76.4
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 2.4e-303 1045.0 683 77.9
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 5.4e-303 1043.9 681 78.1
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 4.7e-299 1030.8 693 75.8
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 6.2e-299 1030.4 676 77.2
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 8.0e-299 1030.0 690 75.7
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 1.2e-297 1026.2 689 76.1
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 2.6e-297 1025.0 689 75.9
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 3.4e-297 1024.6 678 76.0
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 4.9e-296 1020.8 685 76.1
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.9e-295 1018.8 678 75.7
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 2.4e-295 1018.5 623 78.3
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 3.2e-295 1018.1 685 76.1
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 9.2e-295 1016.5 687 75.4
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 1.2e-294 1016.1 677 75.8
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.3e-293 1012.7 678 75.7
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 1.7e-293 1012.3 688 72.1
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 8.6e-293 1010.0 677 74.3
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 1.5e-292 1009.2 683 74.2
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 1.9e-292 1008.8 679 75.3
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.3e-292 1008.1 678 74.9
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 4.3e-292 1007.7 685 74.7
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 9.5e-292 1006.5 691 75.7
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 9.5e-292 1006.5 680 74.0
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 6.2e-291 1003.8 674 74.6
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 1.4e-290 1002.7 681 75.2
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 2.3e-290 1001.9 679 73.8
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 8.9e-290 1000.0 681 74.7
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 2.6e-289 998.4 705 72.9
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.4e-289 998.0 678 74.0
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 4.4e-289 997.7 687 74.1
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 4.4e-289 997.7 679 73.8
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 9.9e-289 996.5 672 73.7
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 1.7e-288 995.7 707 72.8
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 2.9e-288 995.0 685 74.9
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 2.9e-288 995.0 678 75.1
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 2.4e-287 991.9 689 74.5
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 4.1e-287 991.1 689 73.4
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 2.7e-286 988.4 685 74.2
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 7.8e-286 986.9 686 74.5
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 1.5e-284 982.6 695 73.1
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 2.4e-282 975.3 688 71.4
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 6.8e-282 973.8 680 73.1
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 2.6e-281 971.8 692 71.5
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 5.4e-279 964.1 691 70.8
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 7.8e-278 960.3 690 71.3
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 8.7e-277 956.8 694 71.3
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 8.7e-277 956.8 671 70.6
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 1.9e-276 955.7 679 72.2
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 2.5e-276 955.3 691 70.5
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 2.8e-275 951.8 694 70.7
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 2.8e-275 951.8 682 70.5
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 1.8e-274 949.1 674 71.1
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 2.4e-274 948.7 679 71.0
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 2.4e-274 948.7 675 70.5
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 6.9e-274 947.2 677 70.9
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 9.0e-274 946.8 676 70.4
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 1.5e-273 946.0 677 70.8
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 1.5e-273 946.0 673 70.4
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 2.6e-273 945.3 675 70.7
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 4.4e-273 944.5 676 70.3
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 4.4e-273 944.5 677 70.6
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 6.4e-272 940.6 557 84.6
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 8.4e-272 940.3 668 69.5
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 3.5e-270 934.9 631 74.5
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 6.0e-270 934.1 691 69.8
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 2.8e-267 925.2 557 82.2
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 9.9e-265 916.8 677 70.6
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 1.1e-263 913.3 614 72.1
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 7.1e-263 910.6 562 80.4
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 1.2e-262 909.8 817 60.8
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 1.1e-260 903.3 674 68.8
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 4.6e-254 881.3 804 61.1
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 1.0e-248 863.6 555 74.8
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 7.9e-246 854.0 673 65.1
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 2.7e-238 828.9 631 65.3
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 8.2e-235 817.4 686 63.8
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 3.6e-230 802.0 591 70.4
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 1.6e-217 760.0 791 54.2
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 1.0e-216 757.3 473 81.2
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 3.5e-209 732.3 591 61.4
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 1.5e-180 637.1 437 72.3
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 8.4e-155 551.6 375 72.3
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 4.3e-151 539.3 455 60.0
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 1.1e-130 471.5 525 49.3
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 5.1e-120 436.0 352 65.6
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 2.2e-118 430.6 559 45.8
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 1.7e-110 404.4 282 72.0
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 5.2e-104 382.9 292 66.8
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 4.4e-103 379.8 327 62.7
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 4.4e-103 379.8 327 62.7
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 3.6e-89 333.6 555 37.3
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 2.2e-86 324.3 284 58.1
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 9.5e-82 308.9 236 68.6
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 2.4e-61 241.1 566 30.9
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 3.4e-55 220.7 252 46.8
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 1.3e-54 218.8 239 55.2
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 4.0e-48 197.2 180 56.1
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.6e-39 167.9 146 63.0
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 2.7e-36 157.9 124 62.1
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 7.9e-36 156.4 142 57.7
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 2.2e-09 68.6 100 39.0
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 1.5e-07 62.4 97 35.1
Actinidia08858 Actinidia chinensis HOM05D006589 ORTHO05D008350 6.5e-06 57.0 80 60.0


User provided reference genes

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