Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007614 Camellia sinensis var. sinensis HOM05D006131 ORTHO05D008649 8.4e-309 1062.8 507 100.0
CSS0011000 Camellia sinensis var. sinensis HOM05D006131 ORTHO05D008649 1.2e-249 866.3 549 80.1
Actinidia02346 Actinidia chinensis HOM05D006131 ORTHO05D008649 3.9e-245 851.3 558 77.1
vmacro03670 Vaccinium macrocarpon HOM05D006131 ORTHO05D008649 8.6e-245 850.1 532 79.1
Lj1C1234T13 Lonicera japonica HOM05D006131 ORTHO05D008649 3.4e-225 785.0 558 70.3
Hma1.2p1_0298F.1_g117540 Hydrangea macrophylla HOM05D006131 ORTHO05D008649 1.3e-224 783.1 557 70.4
Hma1.2p1_0298F.1_g117550 Hydrangea macrophylla HOM05D006131 ORTHO05D008649 1.3e-224 783.1 557 70.4
QL05p072288 Quercus lobata HOM05D006131 ORTHO05D008649 6.4e-224 780.8 555 70.8
Rhsim13G0150700 Rhododendron simsii HOM05D006131 ORTHO05D008649 6.4e-224 780.8 696 60.5
TAR627G0028 Trochodendron aralioides HOM05D006131 ORTHO05D008649 1.7e-221 772.7 554 69.7
CiPaw.09G096900 Carya illinoinensis HOM05D006131 ORTHO05D008649 5.6e-220 767.7 558 69.5
Manes.17G028300 Manihot esculenta HOM05D006131 ORTHO05D008649 2.1e-219 765.8 558 69.2
HanXRQChr16g0516961 Helianthus annuus HOM05D006131 ORTHO05D008649 1.1e-218 763.5 555 68.6
GSVIVG01012668001 Vitis vinifera HOM05D006131 ORTHO05D008649 1.4e-218 763.1 558 67.7
Duzib235G1477 Durio zibethinus HOM05D006131 ORTHO05D008649 5.3e-218 761.1 558 68.5
Cfa000174 Carpinus fangiana HOM05D006131 ORTHO05D008649 2.0e-217 759.2 558 68.3
Potri.011G009600 Populus trichocarpa HOM05D006131 ORTHO05D008649 3.4e-217 758.4 558 68.6
CANSAT56G3890 Cannabis sativa HOM05D006131 ORTHO05D008649 7.6e-217 757.3 556 67.4
TPR.G36994 Trifolium pratense HOM05D006131 ORTHO05D008649 7.6e-217 757.3 558 67.7
Ciclev10014171m.g Citrus clementina HOM05D006131 ORTHO05D008649 9.9e-217 756.9 558 68.3
Nitab4.5_0004743g0170 Nicotiana tabacum HOM05D006131 ORTHO05D008649 1.3e-216 756.5 550 68.2
Cpa.g.sc152.47 Carica papaya HOM05D006131 ORTHO05D008649 2.2e-216 755.7 558 67.6
Sopen02g025670 Solanum pennellii HOM05D006131 ORTHO05D008649 4.9e-216 754.6 559 67.4
COL.COLO4_31819 Corchorus olitorius HOM05D006131 ORTHO05D008649 8.4e-216 753.8 558 67.6
Solyc02g080990.2 Solanum lycopersicum HOM05D006131 ORTHO05D008649 1.1e-215 753.4 559 67.1
Medtr4g132500 Medicago truncatula HOM05D006131 ORTHO05D008649 1.4e-215 753.1 558 67.2
Gorai.010G183100 Gossypium raimondii HOM05D006131 ORTHO05D008649 2.4e-215 752.3 555 68.1
CAN.G1014.35 Capsicum annuum HOM05D006131 ORTHO05D008649 1.6e-214 749.6 550 67.3
Nitab4.5_0001409g0150 Nicotiana tabacum HOM05D006131 ORTHO05D008649 1.6e-214 749.6 550 67.8
Gohir.D06G156700 Gossypium hirsutum HOM05D006131 ORTHO05D008649 1.3e-213 746.5 555 67.7
ClCG01G021720 Citrullus lanatus HOM05D006131 ORTHO05D008649 3.0e-213 745.3 553 68.2
Aqoxy1G03037 Aquilegia oxysepala HOM05D006131 ORTHO05D008649 6.6e-213 744.2 555 66.5
CsaV3_6G048760 Cucumis sativus L. HOM05D006131 ORTHO05D008649 6.6e-213 744.2 555 68.3
Psat4g005600 Pisum sativum HOM05D006131 ORTHO05D008649 1.1e-212 743.4 553 67.1
VMungo1215G1261 Vigna mungo HOM05D006131 ORTHO05D008649 1.1e-212 743.4 558 67.7
Glyma.07G263100 Glycine max HOM05D006131 ORTHO05D008649 2.5e-212 742.3 558 67.7
TWI38G1228 Tripterygium wilfordii HOM05D006131 ORTHO05D008649 3.3e-212 741.9 558 66.5
Ca_21065_v3 Cicer arietinum L. HOM05D006131 ORTHO05D008649 5.6e-212 741.1 553 67.1
Gohir.A06G150500 Gossypium hirsutum HOM05D006131 ORTHO05D008649 5.6e-212 741.1 555 66.8
Lj4g0011530 Lotus japonicus HOM05D006131 ORTHO05D008649 5.6e-212 741.1 558 66.1
MD10G1325600 Malus domestica HOM05D006131 ORTHO05D008649 5.6e-212 741.1 558 67.7
Prupe.4G016400 Prunus persica HOM05D006131 ORTHO05D008649 4.8e-211 738.0 558 67.4
Peaxi162Scf00178g00056 Petunia axillaris HOM05D006131 ORTHO05D008649 1.1e-210 736.9 550 66.0
Ah.09g234600 Amaranthus hybridus HOM05D006131 ORTHO05D008649 1.4e-210 736.5 555 66.1
AUR62021912 Chenopodium quinoa HOM05D006131 ORTHO05D008649 9.0e-210 733.8 555 65.0
arahy.Tifrunner.gnm1.ann1.34DY78 Arachis hypogaea HOM05D006131 ORTHO05D008649 1.2e-209 733.4 558 65.6
Nn7g38008 Nelumbo nucifera HOM05D006131 ORTHO05D008649 1.2e-209 733.4 555 66.3
Hund21429 Selenicereus undatus HOM05D006131 ORTHO05D008649 2.0e-209 732.6 555 64.9
Eucgr.E03997 Eucalyptus grandis HOM05D006131 ORTHO05D008649 2.6e-209 732.3 558 65.9
Sed0009561 Sechium edule HOM05D006131 ORTHO05D008649 9.9e-209 730.3 555 67.0
ECA234G4389 Erigeron canadensis HOM05D000006 ORTHO05D000091 1.7e-208 729.6 529 68.8
EL10Ac8g20116 Beta vulgaris HOM05D006131 ORTHO05D008649 2.2e-208 729.2 555 65.0
Aqoxy1G02667 Aquilegia oxysepala HOM05D006131 ORTHO05D008649 3.8e-208 728.4 588 62.8
arahy.Tifrunner.gnm1.ann1.EVIY4K Arachis hypogaea HOM05D006131 ORTHO05D008649 6.4e-208 727.6 558 65.1
Lalb_Chr07g0177101 Lupinus albus HOM05D006131 ORTHO05D008649 8.4e-208 727.2 558 65.2
Haze_06845 Corylus avellana HOM05D006131 ORTHO05D008649 1.1e-207 726.9 633 60.3
Sabra11G0007600 Salix brachista HOM05D006131 ORTHO05D008649 1.1e-207 726.9 548 67.5
Oeu051199.1 Olea europaea HOM05D006131 ORTHO05D008649 2.4e-207 725.7 598 62.7
AUR62012745 Chenopodium quinoa HOM05D006131 ORTHO05D008649 9.3e-207 723.8 555 64.5
FvH4_3g01570 Fragaria vesca HOM05D006131 ORTHO05D008649 2.1e-206 722.6 560 66.2
Lsat_1_v5_gn_4_61541 Lactuca sativa HOM05D006131 ORTHO05D008649 2.7e-206 722.2 561 65.2
Cc09_g01330 Coffea canephora HOM05D006131 ORTHO05D008649 7.9e-206 720.7 555 65.4
RcHm_v2.0_Chr5g0002381 Rosa chinensis HOM05D006131 ORTHO05D008649 1.0e-205 720.3 560 66.4
THA.LOC104806315 Tarenaya hassleriana HOM05D006131 ORTHO05D008649 6.7e-205 717.6 558 65.1
FAN25G2733 Fragaria x ananassa HOM05D006131 ORTHO05D008649 1.1e-204 716.8 560 66.1
PGR042G2674 Punica granatum HOM05D006131 ORTHO05D008649 1.8e-202 709.5 555 64.3
Migut.M01378 Erythranthe guttata HOM05D006131 ORTHO05D008649 2.4e-202 709.1 554 64.4
Thhalv10028396m.g Eutrema salsugineum HOM05D006131 ORTHO05D008649 7.6e-201 704.1 553 64.4
PSO541G3086 Papaver somniferum HOM05D006131 ORTHO05D008649 3.8e-200 701.8 581 62.3
AT4G04350 Arabidopsis thaliana HOM05D006131 ORTHO05D008649 8.4e-200 700.7 553 63.8
C03p36250 Brassica napus HOM05D006131 ORTHO05D008649 2.5e-199 699.1 553 64.0
Aa31LG9G9850 Aethionema arabicum HOM05D006131 ORTHO05D008649 1.2e-198 696.8 555 63.6
BolC3t15934H Brassica oleracea HOM05D006131 ORTHO05D008649 1.6e-198 696.4 553 64.0
A03p29960 Brassica napus HOM05D006131 ORTHO05D008649 2.1e-198 696.0 553 63.8
Carub.0006s3219 Capsella rubella HOM05D006131 ORTHO05D008649 2.7e-198 695.7 553 63.1
BraA03t12185Z Brassica rapa HOM05D006131 ORTHO05D008649 7.9e-198 694.1 553 63.7
Sp6g04490 Schrenkiella parvula HOM05D006131 ORTHO05D008649 1.0e-197 693.7 553 63.5
AL6G47890 Arabidopsis lyrata HOM05D006131 ORTHO05D008649 1.8e-197 693.0 558 62.5
AL6G47902 Arabidopsis lyrata HOM05D006131 ORTHO05D008649 1.8e-197 693.0 558 62.5
CARHR253090 Cardamine hirsuta HOM05D006131 ORTHO05D008649 3.9e-197 691.8 554 63.0
SalBow8G4181 Salvia bowleyana HOM05D006131 ORTHO05D008649 5.8e-193 677.9 549 63.4
DCAR_028357 Daucus carota HOM05D006131 ORTHO05D008649 4.9e-192 674.9 613 58.1
ATR0317G053 Amborella trichopoda HOM05D006131 ORTHO05D008649 3.0e-189 665.6 549 60.7
Zm00001eb334790 Zea mays HOM05D006131 ORTHO05D008649 5.0e-184 648.3 550 58.9
Os01g0120300 Oryza sativa ssp. japonica HOM05D006131 ORTHO05D008649 7.9e-182 641.0 546 59.2
SGA_v2.0_scaffold7G03775 Striga asiatica HOM05D006131 ORTHO05D008649 5.3e-178 628.2 561 58.5
MELO3C007414.2 Cucumis melo HOM05D006131 ORTHO05D008649 4.5e-177 625.2 480 67.1
unitig_748.g7594 Utricularia gibba HOM05D006131 ORTHO05D008649 2.7e-174 615.9 533 60.4
Sc17g0007540 Simmondsia chinensis HOM05D006131 ORTHO05D008649 2.3e-173 612.8 433 69.1
BcaB01g02598 Brassica carinata HOM05D006131 ORTHO05D008649 5.7e-172 608.2 508 61.4
Pp3c7_13710 Physcomitrium patens HOM05D006131 ORTHO05D008649 5.0e-168 595.1 549 55.7
Atru.chr10.2271 Acer truncatum HOM05D000321 ORTHO05D008649 1.6e-166 590.1 433 69.3
AagrBONN_evm.TU.Sc2ySwM_362.2691 Anthoceros agrestis HOM05D006131 ORTHO05D008649 5.2e-165 585.1 524 57.3
Mapoly0024s0038 Marchantia polymorpha HOM05D006131 ORTHO05D008649 1.3e-160 570.5 548 51.6
CBR_g51980 Chara braunii HOM05D006131 ORTHO05D008649 1.2e-153 547.4 531 50.8
HPP92_003825 Vanilla planifolia HOM05D006131 ORTHO05D008649 2.0e-153 546.6 456 61.4
Phvul.003G081300 Phaseolus vulgaris HOM05D006131 ORTHO05D008649 3.2e-151 539.3 407 66.3
MBI07_g07142_MAGBIO Magnolia biondii HOM05D006131 ORTHO05D008649 8.0e-150 534.6 405 66.4
Thecc.06G226400 Theobroma cacao HOM05D006131 ORTHO05D008649 9.8e-148 527.7 558 51.6
Glyma.17G010750 Glycine max HOM05D006131 ORTHO05D008649 2.6e-140 503.1 464 58.6
Cre13.g578451 Chlamydomonas reinhardtii HOM05D006131 ORTHO05D008649 3.4e-132 476.1 553 46.3
PRCOL_00006602 Prasinoderma coloniale HOM05D006131 ORTHO05D008649 4.0e-125 452.6 561 45.3
MCO01G222 Micromonas commoda HOM05D006131 ORTHO05D008649 3.2e-114 416.4 526 43.9
Aqoxy1G02886 Aquilegia oxysepala HOM05D006131 ORTHO05D008649 6.0e-113 412.1 307 66.4
Nitab4.5_0004743g0060 Nicotiana tabacum HOM05D006131 ORTHO05D008649 2.9e-99 366.7 358 55.3
MD05G1351100 Malus domestica HOM05D006131 ORTHO05D008649 4.2e-98 362.8 391 52.4
Aqoxy2G02318 Aquilegia oxysepala HOM05D006131 ORTHO05D008649 3.1e-93 346.7 223 73.1
Lj1A1234T51 Lonicera japonica HOM05D006131 ORTHO05D008649 9.9e-92 341.7 509 43.8
CDE04G1529 Ceratophyllum demersum HOM05D006131 ORTHO05D008649 1.8e-85 320.9 219 69.9
ATR0317G090 Amborella trichopoda HOM05D006131 ORTHO05D021223 4.0e-85 319.7 302 55.0
CDE04G0704 Ceratophyllum demersum HOM05D006131 ORTHO05D008649 1.9e-82 310.8 254 63.8
SEGI_37859 Sequoiadendron giganteum HOM05D006131 ORTHO05D008649 1.4e-58 231.5 173 62.4
Aqoxy144s008 Aquilegia oxysepala HOM05D006131 ORTHO05D077905 6.3e-54 216.1 548 29.9
SEGI_30887 Sequoiadendron giganteum HOM05D006131 ORTHO05D008649 1.2e-44 185.3 172 52.3
Dinv20096 Davidia involucrata HOM05D006131 ORTHO05D008649 3.8e-43 180.3 117 72.6
ATR0317G081 Amborella trichopoda HOM05D006131 ORTHO05D064775 8.8e-40 169.1 126 64.3
Oeu051886.1 Olea europaea HOM05D006131 ORTHO05D021223 4.7e-33 146.7 352 31.8
Cfa023421 Carpinus fangiana HOM05D006131 ORTHO05D123919 6.8e-32 142.9 432 28.9
MD05G1351000 Malus domestica HOM05D006131 ORTHO05D021223 2.6e-31 141.0 117 62.4
A03p29990 Brassica napus HOM05D006131 ORTHO05D021223 3.1e-29 134.0 117 59.8
SEGI_22271 Sequoiadendron giganteum HOM05D006131 ORTHO05D021223 4.4e-15 87.0 79 53.2
Aqoxy1G02884 Aquilegia oxysepala HOM05D006131 ORTHO05D078484 2.9e-14 84.3 48 79.2
SalBow1G5129 Salvia bowleyana HOM05D002199 ORTHO05D016797 1.6e-12 78.6 50 72.0
SalBow1G8368 Salvia bowleyana HOM05D002199 ORTHO05D016797 1.6e-12 78.6 50 72.0
SalBow2G3407 Salvia bowleyana HOM05D006131 ORTHO05D016797 1.6e-12 78.6 50 72.0
SalBow3G3473 Salvia bowleyana HOM05D002199 ORTHO05D016797 1.6e-12 78.6 50 72.0
SalBow6G4614 Salvia bowleyana HOM05D006131 ORTHO05D016797 2.7e-12 77.8 52 69.2
SalBow1G1795 Salvia bowleyana HOM05D002199 ORTHO05D016797 1.7e-11 75.1 50 68.0
SalBow1G4554 Salvia bowleyana HOM05D002199 ORTHO05D016797 1.7e-11 75.1 50 68.0
SalBow4G0667 Salvia bowleyana HOM05D002199 ORTHO05D016797 1.7e-11 75.1 50 68.0
SalBow6G1083 Salvia bowleyana HOM05D006131 ORTHO05D016797 1.1e-10 72.4 56 62.5
SEGI_08904 Sequoiadendron giganteum HOM05D006131 ORTHO05D021223 5.2e-08 63.5 57 49.1


User provided reference genes

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