Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007221 Camellia sinensis var. sinensis HOM05D005978 ORTHO05D007472 0.0e+00 1544.3 798 100.0
Actinidia15540 Actinidia chinensis HOM05D005978 ORTHO05D007472 0.0e+00 1211.4 759 83.1
Dinv30321 Davidia involucrata HOM05D005978 ORTHO05D007472 0.0e+00 1154.0 757 79.1
Rhsim06G0000600 Rhododendron simsii HOM05D005978 ORTHO05D007472 0.0e+00 1135.6 882 70.4
TAR376G0648 Trochodendron aralioides HOM05D005978 ORTHO05D007472 0.0e+00 1102.0 758 72.4
GSVIVG01013460001 Vitis vinifera HOM05D005978 ORTHO05D007472 0.0e+00 1081.6 771 72.8
Haze_22888 Corylus avellana HOM05D005978 ORTHO05D007472 7.1e-302 1040.4 785 67.4
Atru.chr13.20 Acer truncatum HOM05D005978 ORTHO05D007472 8.1e-298 1026.9 760 68.0
Ciclev10003766m.g Citrus clementina HOM05D005978 ORTHO05D007472 2.3e-297 1025.4 756 68.5
Nn6g31553 Nelumbo nucifera HOM05D005978 ORTHO05D007472 6.8e-297 1023.8 764 67.7
Manes.18G000350 Manihot esculenta HOM05D005978 ORTHO05D007472 3.1e-289 998.4 757 65.7
CiPaw.08G079000 Carya illinoinensis HOM05D005978 ORTHO05D007472 2.9e-287 991.9 773 65.2
Thecc.08G097500 Theobroma cacao HOM05D005978 ORTHO05D007472 1.4e-286 989.6 755 66.9
TWI36G1144 Tripterygium wilfordii HOM05D005978 ORTHO05D007472 1.9e-286 989.2 756 66.4
DCAR_022963 Daucus carota HOM05D005978 ORTHO05D007472 4.2e-286 988.0 764 68.8
Cc10_g00090 Coffea canephora HOM05D005978 ORTHO05D007472 7.8e-285 983.8 771 67.4
MD06G1000600 Malus domestica HOM05D005978 ORTHO05D007472 1.7e-284 982.6 759 67.2
HanXRQChr16g0512201 Helianthus annuus HOM05D005978 ORTHO05D007472 2.1e-282 975.7 761 67.4
MSTRG.14837 Avicennia marina HOM05D005978 ORTHO05D007472 2.6e-280 968.8 761 66.0
Sopen04g036610 Solanum pennellii HOM05D005978 ORTHO05D007472 2.2e-279 965.7 751 67.2
Solyc04g082980.2 Solanum lycopersicum HOM05D005978 ORTHO05D007472 8.4e-279 963.8 751 67.1
ECA232G2674 Erigeron canadensis HOM05D005978 ORTHO05D007472 4.2e-278 961.4 773 66.4
Glyma.01G245200 Glycine max HOM05D005978 ORTHO05D007472 3.5e-277 958.4 755 64.8
Gorai.009G185700 Gossypium raimondii HOM05D005978 ORTHO05D007472 6.0e-277 957.6 779 63.5
Migut.M00377 Erythranthe guttata HOM05D005978 ORTHO05D007472 7.9e-277 957.2 757 63.4
arahy.Tifrunner.gnm1.ann1.U7IYJM Arachis hypogaea HOM05D005978 ORTHO05D007472 5.6e-275 951.0 752 63.8
QL02p016300 Quercus lobata HOM05D005978 ORTHO05D007472 8.1e-274 947.2 990 53.1
Prupe.5G001100 Prunus persica HOM05D005978 ORTHO05D007472 2.4e-273 945.7 758 65.8
arahy.Tifrunner.gnm1.ann1.BP04P6 Arachis hypogaea HOM05D005978 ORTHO05D007472 3.1e-273 945.3 752 63.3
Ca_24335_v3 Cicer arietinum L. HOM05D005978 ORTHO05D007472 3.1e-273 945.3 758 64.2
CAN.G1330.32 Capsicum annuum HOM05D005978 ORTHO05D007472 5.3e-273 944.5 755 65.2
Eucgr.F03624 Eucalyptus grandis HOM05D005978 ORTHO05D007472 1.5e-272 943.0 762 62.3
Potri.002G001700 Populus trichocarpa HOM05D005978 ORTHO05D007472 4.5e-272 941.4 771 61.7
AUR62042533 Chenopodium quinoa HOM05D005978 ORTHO05D007472 5.8e-272 941.0 764 63.4
Lsat_1_v5_gn_9_48081 Lactuca sativa HOM05D005978 ORTHO05D007472 2.9e-271 938.7 743 68.1
Lj1g0010496 Lotus japonicus HOM05D005978 ORTHO05D007472 2.9e-271 938.7 766 63.6
PGR031G1913 Punica granatum HOM05D005978 ORTHO05D007472 3.8e-271 938.3 775 62.5
TPR.G21607 Trifolium pratense HOM05D005978 ORTHO05D007472 1.1e-270 936.8 757 63.5
Medtr5g004660 Medicago truncatula HOM05D005978 ORTHO05D007472 3.2e-270 935.3 756 63.6
SGA_v2.0_scaffold34G13893 Striga asiatica HOM05D005978 ORTHO05D007472 4.2e-270 934.9 713 65.1
RcHm_v2.0_Chr7g0217581 Rosa chinensis HOM05D005978 ORTHO05D007472 7.1e-270 934.1 776 63.3
CANSAT64G0954 Cannabis sativa HOM05D005978 ORTHO05D007472 1.6e-269 932.9 769 63.2
Lalb_Chr16g0376221 Lupinus albus HOM05D005978 ORTHO05D007472 1.6e-269 932.9 774 61.8
EL10Ac1g01856 Beta vulgaris HOM05D005978 ORTHO05D007472 2.3e-268 929.1 760 65.9
Hund05194 Selenicereus undatus HOM05D005978 ORTHO05D007472 3.0e-268 928.7 749 66.1
Phvul.002G054600 Phaseolus vulgaris HOM05D005978 ORTHO05D007472 1.1e-267 926.8 761 62.2
Sed0020914 Sechium edule HOM05D005978 ORTHO05D007472 3.7e-266 921.8 770 62.6
FvH4_5g26690 Fragaria vesca HOM05D005978 ORTHO05D007472 4.0e-265 918.3 759 63.2
PSO675G6081 Papaver somniferum HOM05D005978 ORTHO05D007472 5.3e-265 917.9 774 61.0
FAN18G0791 Fragaria x ananassa HOM05D005978 ORTHO05D007472 1.2e-264 916.8 759 63.1
Cpa.g.sc36.98 Carica papaya HOM05D005978 ORTHO05D007472 1.5e-264 916.4 794 60.2
PSO541G4404 Papaver somniferum HOM05D005978 ORTHO05D007472 1.3e-263 913.3 764 61.4
MBI04_g23900_MAGBIO Magnolia biondii HOM05D005978 ORTHO05D007472 4.9e-263 911.4 806 60.0
Aqoxy1G03258 Aquilegia oxysepala HOM05D005978 ORTHO05D007472 6.5e-263 911.0 749 62.8
FAN13G0154 Fragaria x ananassa HOM05D005978 ORTHO05D007472 1.4e-262 909.8 759 62.7
Sabra02G0001200 Salix brachista HOM05D005978 ORTHO05D007472 1.9e-262 909.4 820 57.7
COL.COLO4_12265 Corchorus olitorius HOM05D005978 ORTHO05D007472 1.1e-259 900.2 759 62.5
ClCG11G019200 Citrullus lanatus HOM05D005978 ORTHO05D007472 5.7e-259 897.9 791 59.0
Duzib041G0071 Durio zibethinus HOM05D005978 ORTHO05D007472 1.0e-255 887.1 761 61.6
AL2G36770 Arabidopsis lyrata HOM05D005978 ORTHO05D007472 2.9e-255 885.6 755 59.6
C06p50880 Brassica napus HOM05D005978 ORTHO05D007472 1.8e-252 876.3 756 59.9
BcaC08g47227 Brassica carinata HOM05D005978 ORTHO05D007472 5.1e-252 874.8 755 59.6
BraA07t31758Z Brassica rapa HOM05D005978 ORTHO05D007472 6.7e-252 874.4 756 59.5
A07p42300 Brassica napus HOM05D005978 ORTHO05D007472 8.7e-252 874.0 756 59.8
FAN04G0649 Fragaria x ananassa HOM05D005978 ORTHO05D007472 1.9e-251 872.8 759 60.7
SalBow7G3859 Salvia bowleyana HOM05D005978 ORTHO05D007472 2.5e-251 872.5 757 59.6
AT1G76630 Arabidopsis thaliana HOM05D005978 ORTHO05D007472 3.3e-251 872.1 755 58.7
BolC6t40113H Brassica oleracea HOM05D005978 ORTHO05D007472 1.3e-250 870.2 756 59.5
CARHR070190 Cardamine hirsuta HOM05D005978 ORTHO05D007472 4.5e-248 861.7 755 58.7
CsaV3_4G037800 Cucumis sativus L. HOM05D005978 ORTHO05D007472 1.0e-247 860.5 754 58.6
Sc26g0004780 Simmondsia chinensis HOM05D005978 ORTHO05D007472 5.0e-247 858.2 754 61.5
Ah.11g042550 Amaranthus hybridus HOM05D005978 ORTHO05D007472 4.2e-246 855.1 784 57.8
MELO3C017073.2 Cucumis melo HOM05D005978 ORTHO05D007472 2.1e-245 852.8 770 57.4
ATR0605G322 Amborella trichopoda HOM05D005978 ORTHO05D007472 3.6e-245 852.0 767 56.8
BcaC08g47175 Brassica carinata HOM05D005978 ORTHO05D007472 9.1e-241 837.4 755 57.7
HPP92_007456 Vanilla planifolia HOM05D005978 ORTHO05D007472 1.0e-239 833.9 756 57.0
Peaxi162Scf00385g01220 Petunia axillaris HOM05D005978 ORTHO05D007472 8.0e-237 824.3 799 54.9
Sp5g31790 Schrenkiella parvula HOM05D005978 ORTHO05D007472 2.8e-234 815.8 756 56.6
Carub.0002s2353 Capsella rubella HOM05D005978 ORTHO05D007472 4.1e-233 812.0 755 55.5
Thhalv10018029m.g Eutrema salsugineum HOM05D005978 ORTHO05D007472 7.7e-232 807.7 756 55.7
AUR62035192 Chenopodium quinoa HOM05D005978 ORTHO05D007472 2.7e-229 799.3 743 58.0
Gohir.A05G177300 Gossypium hirsutum HOM05D005978 ORTHO05D007472 1.4e-228 797.0 637 65.0
Os10g0548200 Oryza sativa ssp. japonica HOM05D005978 ORTHO05D007472 6.7e-228 794.7 789 54.5
THA.LOC104812025 Tarenaya hassleriana HOM05D005978 ORTHO05D007472 6.7e-228 794.7 768 56.5
Psat4g213520 Pisum sativum HOM05D005978 ORTHO05D007472 1.1e-222 777.3 639 63.7
Zm00001eb022830 Zea mays HOM05D005978 ORTHO05D007472 6.1e-221 771.5 772 51.3
SEGI_31935 Sequoiadendron giganteum HOM05D005978 ORTHO05D007472 3.7e-210 735.7 759 50.7
Aa31LG4G6720 Aethionema arabicum HOM05D005978 ORTHO05D007472 3.7e-202 709.1 746 50.4
FAN08G2840 Fragaria x ananassa HOM05D005978 ORTHO05D007472 6.8e-188 661.8 759 50.1
Dinv04441 Davidia involucrata HOM05D005978 ORTHO05D007472 1.0e-175 621.3 423 73.5
unitig_899.g15248 Utricularia gibba HOM05D005978 ORTHO05D007472 1.9e-166 590.5 773 45.0
CDE04G2732 Ceratophyllum demersum HOM05D005978 ORTHO05D007472 6.7e-159 565.5 616 49.8
Mapoly0002s0268 Marchantia polymorpha HOM05D005978 ORTHO05D007472 5.7e-142 509.2 758 39.6
Pp3c9_11110 Physcomitrium patens HOM05D005978 ORTHO05D007472 2.0e-131 474.2 748 38.4
Nitab4.5_0003364g0080 Nicotiana tabacum HOM05D005978 ORTHO05D007472 3.3e-126 456.8 444 55.0
AagrBONN_evm.TU.Sc2ySwM_228.3882 Anthoceros agrestis HOM05D005978 ORTHO05D007472 7.7e-115 419.1 766 34.9
SMO236G0050 Selaginella moellendorffii HOM05D005978 ORTHO05D007472 3.1e-108 397.1 736 34.9
SMO236G0024 Selaginella moellendorffii HOM05D005978 ORTHO05D007472 6.1e-104 382.9 529 39.9
Gohir.D05G180700 Gossypium hirsutum HOM05D005978 ORTHO05D007472 6.8e-103 379.4 316 64.2
SHI07937 Sapria himalayana HOM05D005978 ORTHO05D007472 2.2e-93 347.8 292 59.2
Nn6g31559 Nelumbo nucifera HOM05D005978 ORTHO05D007472 9.5e-89 332.4 209 76.1
Nitab4.5_0003364g0020 Nicotiana tabacum HOM05D005978 ORTHO05D007472 1.5e-86 325.1 340 54.4
Oeu013502.1 Olea europaea HOM05D005978 ORTHO05D007472 9.5e-73 279.3 182 72.0
Gohir.D05G180650 Gossypium hirsutum HOM05D005978 ORTHO05D007472 2.2e-69 268.1 204 66.7
Dinv04442 Davidia involucrata HOM05D005978 ORTHO05D007472 1.9e-68 265.0 176 77.8
Oeu013500.1 Olea europaea HOM05D005978 ORTHO05D007472 3.2e-52 211.1 178 65.2
arahy.Tifrunner.gnm1.ann1.G030KM Arachis hypogaea HOM05D005978 ORTHO05D007472 1.5e-49 202.2 192 53.6
CBR_g3864 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-42 179.5 643 27.7
SHI07938 Sapria himalayana HOM05D005978 ORTHO05D007472 2.6e-30 138.3 152 44.7
SMO124G0009 Selaginella moellendorffii HOM05D005978 ORTHO05D007472 9.7e-25 119.8 304 31.6
Rhsim06G0014600 Rhododendron simsii HOM05D000267 ORTHO05D002764 1.2e-19 102.8 107 55.1
arahy.Tifrunner.gnm1.ann1.IN83YX Arachis hypogaea HOM05D005978 ORTHO05D007472 1.1e-17 96.3 64 67.2
Cre12.g493550 Chlamydomonas reinhardtii HOM05D005978 ORTHO05D007472 5.7e-17 94.0 356 25.0
arahy.Tifrunner.gnm1.ann1.HEP796 Arachis hypogaea HOM05D005978 ORTHO05D007472 4.5e-14 84.3 53 69.8
MCO08G135 Micromonas commoda HOM05D005978 ORTHO05D007472 5.9e-14 84.0 195 30.8
Prupe.4G218400 Prunus persica HOM05D005978 ORTHO05D007472 1.7e-13 82.4 53 77.4
Dinv04443 Davidia involucrata HOM05D005978 ORTHO05D007472 7.9e-11 73.6 51 70.6
C07p29320 Brassica napus HOM05D005978 ORTHO05D007472 8.8e-10 70.1 48 62.5
BolC7t43475H Brassica oleracea HOM05D005978 ORTHO05D007472 2.0e-09 68.9 48 62.5
arahy.Tifrunner.gnm1.ann1.CI9DXK Arachis hypogaea HOM05D005978 ORTHO05D007472 9.7e-09 66.6 66 56.1
arahy.Tifrunner.gnm1.ann1.5RG0UU Arachis hypogaea HOM05D006523 ORTHO05D008212 4.8e-08 64.3 110 41.8


User provided reference genes

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